Array 1 61239-59118 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNGA010000003.1 Flavonifractor plautii strain 1001283B150304_161114_B1 NODE_3_length_268101_cov_35.3551, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 61238 33 100.0 35 ................................. GGCGTTATGACCCTCAAGGAGAGCGGCAAAGAAGA 61170 33 100.0 33 ................................. ATGAGCTTACCCCTTGAGACCCGAGAGAAGTTC 61104 33 100.0 34 ................................. ATGTGCGGTGAGTATGGCTCCACCACCTTCCGCC 61037 33 100.0 35 ................................. AACATCCAGCCCGAGTATGTCGACATGTCCCGCCG 60969 33 100.0 36 ................................. CCTAGAATCGACTCGTGTTTCTGCTCAGTCTAATCA 60900 33 100.0 34 ................................. AACATCCAGCCCGAGTATGTCGACATGTCCCGCC 60833 33 100.0 33 ................................. GCCTGTGGTGAGTATGGCTCTACCACCTTCCGG 60767 33 100.0 35 ................................. GTAATGACCTCCTGTGTCCCTGGGGCGACGGCTGC 60699 33 100.0 33 ................................. CGCTGCACCTCTTCCAGCACGCCGCCCTCCTCC 60633 33 100.0 35 ................................. CCGCTCAGTCTAATCAGGCTATCGCGGATAAATAT 60565 33 100.0 34 ................................. TTTGTTGATGTAAGGAGGTGTAGAAAATGCCGAA 60498 33 100.0 33 ................................. CGCGGCCACTATTAACCAGCTTCGCATGGCCTT 60432 33 100.0 35 ................................. ATTTTATAGCATATGGCCCCGAAAGTGGGGCTTAC 60364 33 100.0 34 ................................. CACGCTTGGCTCGCTCAGGCAGGCTCTGAGAGCT 60297 33 100.0 35 ................................. TTTAAAGGAGGAAAAATAAAAATGAATCCTACCGA 60229 33 100.0 34 ................................. TAATGCTACGAAGAAAAATGCAAATGACGCTATG 60162 33 100.0 34 ................................. CCCGGTAAATATCCCAGTTTATGAGCATAGCGCA 60095 33 100.0 34 ................................. CTGTAGGTTATGAGGGAACACAGAGCAGAACAGC 60028 33 100.0 35 ................................. TTGAGGGTGAATTAGAGAAGCGTGACCCTAAGATT 59960 33 100.0 34 ................................. CATACCAACCGTGCCGTTACGCTTTGCAGACTTG 59893 33 100.0 35 ................................. TCGAAAAAAGCGTTGATGTCGGCTCCGCTGGCCGT 59825 33 100.0 34 ................................. TTGAGGGTGAGCTAGAAAAGCGTGATCCCAAGAT 59758 33 100.0 34 ................................. GCCCTGTACCGCATGAACGGCCAGACCAAGGAGT 59691 33 100.0 34 ................................. ACGCGGGTCGTCATGACCTCAAAGCCCCGGGCCT 59624 33 100.0 33 ................................. TTTTCAACCTCTCTTTGCACCTCATTTCCAGTA 59558 33 100.0 34 ................................. ATAGGTCATGGTGGACTGGGCCAGCTTGGCCTTC 59491 33 100.0 33 ................................. CCCATGGCTGCAATAGTCATCCTCCTGTGGCTC 59425 33 100.0 34 ................................. CAGTGGTTGTGCTGCATCACCCGGTCGATGGGGA 59358 33 100.0 37 ................................. TGCACCTGAGTCACCAGAGACTGGAGGCCCGTGATGC 59288 33 100.0 35 ................................. TATCCGTGATGTCCGCAGCGGCTTCCTCACCCCTA 59220 33 97.0 38 ......................G.......... AGTGAGAAATACGACATCACCAAGCATCCCCGGTATAA 59149 32 87.9 0 ............A...............-..CC | ========== ====== ====== ====== ================================= ====================================== ================== 32 33 99.5 34 GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Left flank : GGACGCCTATCCACCCTTTTTGTGGAAGTGAGGCCATTATGCTGGTTTTGATTACCTACGATGTCAATACAGCGGATGCCGCCGGGCGCAAACGCCTGCGGCAGATCGCCAGGCAGTGCGTCAACTACGGCCAGCGGGTTCAGAACTCCGTCTTTGAGTGCAAGCTGGATCCGGCCCAGTACAAGCTGCTTCAAGCCAAGCTGTGTGCGATCATGGATCCCGAACGGGACAGCCTCCGCTTTTATTCCCTGGGAAATCGCTATGAGCAGAAGATCGAACACTTTGGCTGTAAGCAGACCTACCTTCCAGACGAACCTTTGATTTTGTAGCGTGCGAAGTCCAAGATGACACGCCTTCTCCGGCCGGTTCGCACCCAAAAAGCATAAAGGAAAGCTTAATGGAGCATAGGCGCGTTTGTTTTTGTATGCTCAGCCTTCTTCCCCTTGTGCAAATAAGCAAATTGAGCCAAGCAAACTCTCTGCTCTTTAGTAAAGTTTGCT # Right flank : CGTCTTACAGAGGCGCCTGAGCCGTTTACAGGAGCCACCGCATAGCGGCGCGGGTTGATTCAGATTTTTCACCCCGCGCCTCTATTGTTTGCGCTTCTTTTCGTTGACTGGTCTAGTAGGGAATGATATAATAGGATGATTATGACAAAAACTATGGTGGGAAGATCGTATTATGTGGATTTCAACTGACTGGAAGGACTATGAACTGCTGGACTGCGGCGGCGGCGAGCGGCTGGAGCGCTGGGGCAAGTATCTGTTGGTGCGGCCCGATCCTCAGGCCATCTGGCGTCCGGAGGGGCGGCATCCCGGATGGCGGAGGCACGACGCCCGGTACCAGCGCGCCTCCACCGGAGGGGGCCAGTGGGTCAAGAAGGAACTGCCCCAGCGCTGGACATTGGGCTACAAGGGGCTGACTCTCAACATCAAGCCCATGAACTTCAAGCATACCGGCGTCTTTCCAGAGCAGGCAGCCAACTGGGACTTCGCCATGGAGCGCATCC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCTCGCGGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //