Array 1 14770-17233 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAGWY010000029.1 Klebsiella pneumoniae strain 5012STDY7312610, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 14770 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 14829 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 14890 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 14951 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 15012 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 15073 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 15134 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 15195 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 15256 29 96.6 32 A............................ GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 15317 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 15378 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 15439 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 15500 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 15561 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 15622 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 15683 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 15744 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 15805 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 15866 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 15927 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 15988 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 16049 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 16110 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 16171 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 16232 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 16293 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 16354 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 16415 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 16476 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 16537 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 16598 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 16659 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 16720 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 16781 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 16842 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 16903 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 16964 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 17025 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 17086 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 17147 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 17205 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 41 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //