Array 1 525589-527407 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGTR010000001.1 Enterococcus faecalis strain 4928STDY7071622, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 525589 37 97.3 29 ....................................G AATTCGTAGATGAATATTTTGATGATGAA 525655 37 100.0 29 ..................................... AGCTAAAGGAGCAGTAGTAAATGTCAATA 525721 37 97.3 29 ....................................T TTTCTTCGCTCGGTTACATCTGGCTTGTG 525787 37 97.3 29 ....................................C TGGCATATTGGACTTCTAACTTTTATGTT 525853 37 97.3 29 ....................................C CCATTAATTAAAGTAATCACGGCATTTAT 525919 37 100.0 29 ..................................... CATTCTATTTCTATTAAGGCTCTACACAT 525985 37 97.3 29 ....................................T AATTGATTGGTCACGTGACCCAGAACTAT 526051 37 97.3 29 ....................................T GGCTTTTTAGTCTTTAATACATAATCTTC 526117 37 97.3 29 ....................................G AAACCTCCCGATAATCTTTCAATAAAGCT 526183 37 97.3 29 ....................................G TTATAGCAATAGCAGTCGTTGTTCTATTA 526249 37 97.3 29 ....................................T CACACGCATGCAAGTGTACTGCTTGCTGC 526315 37 97.3 29 ....................................C TAACCACATTTGAAGAAGTCTATAACCTT 526381 37 100.0 29 ..................................... TTGACCCATTCTTGATAATCAAGAATGGA 526447 37 97.3 29 ....................................T TTTTTTCAGTTGGTGTTTCAGGTACAATG 526513 37 97.3 29 ....................................T TTATTTTTAACCCAGTCGGCTGCGTTTCC 526579 37 100.0 29 ..................................... TCTCTCCTAATGGAAATCCTTATGATGGA 526645 37 97.3 29 ....................................G TGCAACTGCAGCTTCTGATGCATTTCCCA 526711 37 97.3 29 ....................................C CGTGTGTTAAATGGTGCGTATCGATTCTA 526777 37 97.3 29 ....................................T CATGAATACGCCATCCGATTATATATTGA 526843 37 100.0 29 ..................................... TTTTCTTAATATCCTGCTCCATAGCCACT 526909 37 97.3 29 ....................................T CCGCCTATGATTACATCGCCTAGAACGTT 526975 37 100.0 29 ..................................... GAAAGCTAAAAAGCGTTTTATTATTGCAC 527041 37 100.0 29 ..................................... ACAATTAGCGCCAGCTGGCCAGATTCAAT 527107 37 100.0 29 ..................................... CAGAAATATCAAACGCAAAAAAAGGTTTC 527173 37 97.3 29 ....................................G TTAAATTTTACATCAACAAGCCAACCGTT 527239 37 97.3 29 ....................................G AAAAGCAGTTCGAGCGGAAACTGCGACCA 527305 37 94.6 29 ....................G...............G ACTTACAAAAGACTGTGATTTACGTTATA 527371 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================= ================== 28 37 98.1 29 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Left flank : CATATATCCTCATCAAGTAGTAAATGCTTCTTTTGACTTTCAAGAGGGACGAACAACAGAAGGTGGAGAAATGACACACATGATTGGCTTTGCCACTTCGCAAGAAAATACCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCAAATGAAGGTCCTTTCCCACAAACTTTACAAGAAACCTGGGCAAGGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTCGTTGCAGCACCAGAAATTTCGTTTACGCAATATCAAGGACCAGCAGAAGCTAAGTATAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAACCCACCATTGAAAAATGGTGGGTTTTTCCGCCAAGAAGGAGAAAGTTTGGTATAATAAACGTGAAGAAAAAAATCAGACCTTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAATACGGAATCATGGAGAAAAAATAATTCTCCGAG # Right flank : AAACTTTTTTGATTTGGCTTTTTCTCCCCTGTTTTATAGTCATGTTGTTAAAAAACAAACTATCACCTCAAGCAATCCGTAATTTTCATCACAAGATTAGAATTTTTATCATCAAAGACGAGCTGCTTCAATTTTTGGAAACTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAAAGGGAAGAAATCTTGGGAGCACCTAAAAAAATTGTGAGAAATGCTTCTGTATTGTTTGGTTTCTGCCTCAGAAAGTTGTATACTTAGATTGGAATTATTCTATATTACATGCATTTTCACACTTTTTGGAAAAGTTCACTTGAATTTTCTTTTAGTTTCGTAGATAAAAGGAGTCATCGCTAATGGAAATGAACAATTCAGGTAAGCTTGTTTCTTTGTGTGGAGGCAAATCAGGGAGGAAATAATATGTTTGATATTGTAACATTGGCGAGAA # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.44, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 1 211653-212217 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGTR010000002.1 Enterococcus faecalis strain 4928STDY7071622, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 211653 37 97.3 29 ....................................A GCGAACAAGATTCTAACGGTGTAAACAAG 211719 37 100.0 29 ..................................... TTAAAAACTACAGGCCTAAAAGGTGATCC 211785 37 97.3 29 ....................................A GCGAACAAGATTCTAACGGTGTAAACAAG 211851 37 100.0 29 ..................................... AAACAGTCTACCATGTAACTAGTGAATGC 211917 37 100.0 29 ..................................... TATAGAAGTACAGTCACCATCAGCGACCT 211983 37 97.3 29 ....................................A GGGCTGCAGGAGTTAATGTTACAATCTCA 212049 37 97.3 29 ....................................C CACTTTATTAATTGCTTGTCAACACGTCT 212115 37 97.3 29 ....................................G TATCTACGTGCATAATCATATCGACTCAT 212181 37 97.3 0 ....................................C | ========== ====== ====== ====== ===================================== ============================= ================== 9 37 98.2 29 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Left flank : GCACAATTAAATGATAAACCAGAAGTCAAATCAATGATTGAGAAGTTAACTGGAACAATTAGTCAATTAATTGGCTATGAATTGTTGGAACATGAAATGGATTTGGAAGAAGATGGCATCACTGTGCAGGAACTTTTCAAAGCTCTTGGAATCAAAATCGAAACAACGAGTGATACGATTTTTGAAAAAGTTATGGAAATTACACAAGTACATCGTTATTTATCAAAGAAAAAATTATTGATTTTTATTAATGCGTGTACGTATTTGACAGAGGATGAAGTGCAACAAGTGGTAGAATATATCTCTTTAAATAATGTGGATGTCCTGTTTTTAGAACAAAGGGTGGTCCAGAACAGATTCCAATATATTTTGGACGAAAACTTTTATTTGAGTTATGAAAAAGCTTAAATTGTTACTGATTAGTGGTTCATTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAGTACGGAACTTTGGAAAAAAATAATTCTCCGAG # Right flank : CAATGTAAATGCTCATTATGATTTACATATGTTTTAGAGTCATGTTGTTTAGTTTTCGCAGATACGATTTGATTGATGTAAAAATATCGTTAATATGTATAAATATGGTTATTATATAAAAAATATAAGTAATAAATTGAAGCTTTGCTAAAGCAAGTGATGCGATTACGAAATTATTTAATTTTAGAGTCACGTTATTTATTACTTTACGAATAGAGAATACGATTATCTATAAATCAAGAATTAATCCCCAATTTATTGAAAATGACACTCCCTGTTTTATTAATATTTCATGCTTTTGTTGTACTATTTGATGATACAAAAAAGTAAAACTGAGGACCCAATTAAAGTCAAGTTAACCACATTGAAAGATAAACCTTTCAATGTGGTTAAAGATGCTTAATGAGATTCATGAAACATAGAGAGCGGATTAATTTCCTATGCTCTTTATTTGTATATTTTCTTGGGAATCATTATTGATTGTGGATTAAAAAGATAAT # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //