Array 1 894507-897113 **** Predicted by CRISPRDetect 2.4 *** >NC_017503.1 Mycoplasma gallisepticum str. F, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 894507 36 100.0 30 .................................... ATTTACGAGCTAATTGGACTTAAGTAAATA 894573 36 100.0 30 .................................... ATTTTAGCGAACCTAACTGATATTGTTACT 894639 36 100.0 30 .................................... ATCAACAACTGTATCAACGCTTTCTAACCG 894705 36 100.0 30 .................................... AAAGTGAAACTTGAGTAAGTCAAGTTACCG 894771 36 100.0 30 .................................... TTATTGAACAACTTAAAACACTTGACAAAC 894837 36 100.0 30 .................................... TATCCCCGAAAACATAAAAAACATTCAATG 894903 36 100.0 30 .................................... AACATCTAGACTTGACAAATAACGTTCGAC 894969 36 100.0 30 .................................... AACCGAACGAACTTTTTCAAACTTAAGAAT 895035 36 100.0 30 .................................... TTGCCCATATTTGGTTTATGGTAGTGTACT 895101 36 100.0 30 .................................... AAATTTTAGTGATGGATCGTCAGTTGTTCA 895167 36 100.0 30 .................................... ATTTTAAAGATAAAACTGCGCTTGAAGTGG 895233 36 100.0 30 .................................... CAAATTTAAAACACGTTTATATTTTTGACA 895299 36 100.0 30 .................................... GCAGGTATATATATAACAAGTCAAGCGCGT 895365 36 100.0 30 .................................... GAAAACGTCATCTTAACGACTTCGTTGTTG 895431 36 100.0 30 .................................... ACTCGATCATTTTTTCAGCTCAAAATTTAG 895497 36 100.0 30 .................................... TGAATCCATAGGAATTATTTCATCAAAAAT 895563 36 100.0 30 .................................... TTTTATTCCAGAAACTCTTAAAAAAGTTGA 895629 36 100.0 30 .................................... CCTTGAGCACTTGAACGATGATTAAAATAC 895695 36 100.0 30 .................................... AAATGCAACTTGTTTTCAGCTGCAAATTTA 895761 36 100.0 30 .................................... GTAATGTTTGGAATTGTTAACTTGTCACTT 895827 36 100.0 30 .................................... GTTTAATGGTTATGACCAGATTTTGATACC 895893 36 100.0 30 .................................... CACTTTAACAACACAACAAACTGAGTTAGT 895959 36 100.0 30 .................................... AAAGTGAAACTTGAGTGAGCCAAGTTACTG 896025 36 100.0 30 .................................... GACCGAAAAAATATTACCCACGTTTGGTTT 896091 36 100.0 30 .................................... ATTAACGACACTAACGCAGTTGTAAAAATT 896157 36 100.0 30 .................................... AAATTACGATTTTTTATTCCCGAAACTTTT 896223 36 100.0 30 .................................... TGATTTGTGTAAGTAATACTTGTCGCGCTT 896289 36 100.0 30 .................................... CAGCGCTTGAAGTCGTTGAAAAGATCAATA 896355 36 100.0 30 .................................... TTAATGAACAAGACTATTTAGGTCTTTTAA 896421 36 100.0 30 .................................... AAATACTCGCAACTTTTTTAATGTTATAAG 896487 36 100.0 30 .................................... AAGATCACTAACCATCAAGTTCGTGTTAAT 896553 36 100.0 30 .................................... AAAAACGAAGAAAACTTAAATAAATTTATT 896619 36 100.0 30 .................................... CACACACCAAAGATAAGTCGTGACTAGCTC 896685 36 100.0 30 .................................... TAGTTGATAGTTATTTAGACTATTTTGCTG 896751 36 100.0 28 .................................... TGATCAGAGTTATGCAGAATCATTATCT 896815 36 100.0 29 .................................... ATCGGAATGTTTTTATTGTTGATCCTGAA 896880 36 100.0 30 .................................... TTTTTAAAGTTAATTTTAAAAAAATCTTAA 896946 36 100.0 30 .................................... AGACCTATAACCACAACTTACTATTTAGTT 897012 36 100.0 30 .................................... TTATTAATAAACCTCTCTAAATTTTGTGGT 897078 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 40 36 100.0 30 GTTTTAGCACTGTACAATACTTGTGTAAGCAATAAC # Left flank : TTGATAAAGAAGTTGTTGCTAAACTTAATGAAACGTTAGGTCGTGATATTATCTCGTTAGATACTTCTTACTCTAAGATTCTGAAATCAATAATAAAGATTTCAGAAGACTATATAGATCATGAATTTATCTATTCATATTTAGAATTATTACATTGATCAAAAGAAGTTAAAACAGTTATTCTTAAAGACTTTGATAATATCGATCTAAAAAGGTTAAGTAACTTAACTCAAACTACTAATTTAATTATTATGAAGAATGATATTATCTATGATCTTGAAAAAAATTTTGAGTTTTTTGAGACATACTGCTTGATTGATCATGATTATGAAAATATGATTAAGATTGATAATATGCCTTCTTTTGAATATTTATTAGAAGATATTTTCAAAGTTATGGTTGATGAAGAGTTTAAGGCCAATATGTCTTTTCATCAGCTAGAAATAATTAAAAAAGAATTAAAAAAGCAGATTAATTAGCTTATTTTATTTGACAATGAG # Right flank : CAAAAACAAGTATTTATCTATAAACAAAAAGTTTTATCATTAAACATATTTAATCTAAAACAAAATTTTAAATAACTAAACTATTACTTAATTTTTTGTTTCATATTAAACAACATAATTCCAGTTGCTACTGAGACGTTTAAGGACTGTATCTTATCAGTATACATCGGGATCTTGATCTGATAATCAGCATTCTTAATTAGTTGACTCGAAACTCCCTTTTGTTCGTTCCCAACAATTAGGATTGATTTATTAGCATAATCAACATTATAATCTTGAGCTTGATCACTTAAATTAGACACATAAGATCAAAAGCCATACTTATCTTGTAGATCTTTGATCGCATAAGATAAGTTGGCAACCTCAATTAGATTAAGATAAAAACATGCACCTAGTGATGTTTTTATCACCGTGTTGTTAATGCTTGCTTGATTGTCTTTTTTAAAGATGACCCCAAGCACATTTGCTGCCAAACAACTCCGTAAGATCCCACCAAAATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGCACTGTACAATACTTGTGTAAGCAATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGCACTGTACAATACTTGTGTAAGCAATAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [81.7-85.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //