Array 1 1481-273 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFDUH010000032.1 Enterobacter cloacae complex sp. P13RS 1702009150-2_S60_R1_(paired)_contig_32, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ==================================================================== ================== 1480 28 100.0 32 ............................ TTGTCAGTCTGATGAAAATAAAGGGCCAATGC 1420 28 100.0 32 ............................ AGCATCGAATCCAGCGGCGTGTTAGACGTGGC 1360 28 100.0 32 ............................ TAAGAAGGAGTATTTCCCGCTATACAGCGAAG 1300 28 100.0 32 ............................ GGTGAATATGTCCCGCCACTGGCCGTGGAAGT 1240 28 100.0 68 ............................ TCTTTTTGCTCCTTTTTGTCATCCGTTGACATGTTCACTGCCGTACAGGNNNNNNNNNNNNNNNNNNN 1144 28 60.7 32 NNNNNNNNNNN................. CGCGAGGCCGCCGCAGCTCTTGGGATTAACCC 1084 28 100.0 32 ............................ AGCTGTTCGCCGGTCATTGGTTTATTGGCTGT 1024 28 100.0 33 ............................ GGTTGCAGCATAGTGCTTAAGTGCATCAGTTTT 963 28 100.0 32 ............................ TCATGGGGGTGGCCTGACAATGCTGAATTTTT 903 28 100.0 32 ............................ TTGTGAAGCACTATGGCGGTAACTACCAAGGA 843 28 96.4 33 ....................T....... AAATCGAAGCGAGTGGGAAAAGAACAGTCACAA 782 28 100.0 32 ............................ TGTCATATCGCCAATACTGATTGATCGACTTT 722 28 100.0 32 ............................ GTGAACAACATTGAGCTGAGGTTGCAGTTAAT 662 28 100.0 33 ............................ CACCAGCTGCATCCATGCCCCGAACCCCAAAAT 601 28 100.0 32 ............................ TCGAGCGTCATCGTTGGGGTTGATTTGGATTT 541 28 96.4 32 ..........T................. TGCATTGCTTCTGCGTGGATTTGATCGAGGGT 481 28 100.0 32 ............................ CGACGCGATTCAGGTCACCGGCACAAGTCAGT 421 28 100.0 32 ............................ CTGCGGAGCGGGGGGACCAACTTCTGAGGCGC 361 28 100.0 33 ............................ CGTGTCGGAAGAGGGACAGGGAAACGGGGCGTT 300 28 92.9 0 ................T......T.... | ========== ====== ====== ====== ============================ ==================================================================== ================== 20 28 97.3 34 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TAGGGTTCACTGCCGTACAGGCAGCTTAGAAATGGCGCACAGAGGGCGAGGCGCACGGCTACCGGTTCACTGCCGTACAGGCAGCTTAGAAATGCGCGAAACCAGACCAGCGCACGCGGGACGGGTTCACTGCCGTACAGGCAGCTTAGAAAGTCCCGGCGGGGTTAGCCGGGATGGTCGCAGCGTTCACTGCCGTACAGGCAGCTTAGAAAAGGGCGATTTCAAACACGCGCTTATTCATCAGGTTCACTGCCGTACAGGCAGCTTAGAAAATGACGCTGGCAACCGCCTTGCCGTTGATCATGTTCACTGCCGTACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACAGGCAGCTTAGAAACGCCAGACGTGGGGCGAGCAGGTAAGCGCAAT # Right flank : ATGTTATTCTTTGTATTGTGGATTTCTTTCTATGTGCACTGCCGTACAGGCAGCTTAGAAANNCACTGCCGTACAGTCAGCTTTGAAAGCCCCTCTGGGCTTTAATGCCGTGGAAATAGCGTTACTGTCCCATAGACAGTACAAGTAAACCCATTCCTCACAAATATTCATCTCGTCTATTTAAAACGAAATACCATCATCCACACGCTTTCCATTTGCAGATTAAATAAAAATCCCATTCAGGGGTTAATTATATTTCCGTGTATATATTAT # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:-0.10, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 2037-1709 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFDUH010000032.1 Enterobacter cloacae complex sp. P13RS 1702009150-2_S60_R1_(paired)_contig_32, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2036 28 100.0 32 ............................ ACTGGCACCTGCCCCAGCATCCCAAAGATAGG 1976 28 100.0 32 ............................ TGGCGCACAGAGGGCGAGGCGCACGGCTACCG 1916 28 100.0 32 ............................ TGCGCGAAACCAGACCAGCGCACGCGGGACGG 1856 28 100.0 32 ............................ GTCCCGGCGGGGTTAGCCGGGATGGTCGCAGC 1796 28 100.0 32 ............................ AGGGCGATTTCAAACACGCGCTTATTCATCAG 1736 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 6 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACTTCCGCAAACGCAGCCCGTTTGCCGTTGTCTCGGAGCCTACCTGGAAGAGGTGAAATCCGGCCTCACAGAATCAATGCGTGATTTTCAGGTGGTGGAATTTGAGGAAGAAGCGGAACAACCGCGACAAAAAGAGTGGTTGCTTGAAGATACAGAAACGAAGTGTGATTACTGCCGGGCGTTGAATCATGTGCTGCTGGTGTCGCATTTTGACCGCGACATGCTGCCGCTTCTTACAGGACTGCTCCATGACATCACGCATTCTATGGTTGCAGATGTCGTTGCGCCTCAACGTGCAGAAACGGTAGTTCACATTATTTCCTGAATGTAGTTTGTGACGTCCGAAGTAGGCCCCTGACGCCACCGGCTAGACCCTTTTTTTTTATGATTACGTAACCTTTTGATTTATATAATGCGAATTTACGTACCAGAAAAAAGGGTTTTATGCAGGAAGTTGATTATTTTCTTTTCTAACAATAAGATGGCGTAGTTTCCTTTCA # Right flank : ATGACGCTGGCAACCGCCTTGCCGTTGATCATGTTCACTGCCGTACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACAGGCAGCTTAGAAACGCCAGACGTGGGGCGAGCAGGTAAGCGCAATGTTCACTGCCGTACAGGCAGCTTAGAAATTGTCAGTCTGATGAAAATAAAGGGCCAATGCGTTCACTGCCGTACAGGCAGCTTAGAAAAGCATCGAATCCAGCGGCGTGTTAGACGTGGCGTTCACTGCCGTACAGGCAGCTTAGAAATAAGAAGGAGTATTTCCCGCTATACAGCGAAGGTTCACTGCCGTACAGGCAGCTTAGAAAGGTGAATATGTCCCGCCACTGGCCGTGGAAGTGTTCACTGCCGTACAGGCAGCTTAGAAATCTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.10,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 9383-9530 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFDUH010000044.1 Enterobacter cloacae complex sp. P13RS 1702009150-2_S60_R1_(paired)_contig_45, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 9383 28 100.0 33 ............................ GCAGCCGGTCACGGTGACCATCCCGACGCAGAG 9444 28 100.0 31 ............................ GTCCGGGCATTATTTACGATATGCGTGACCA 9503 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 3 28 100.0 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GGGCTACGCGTTCGCTCTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTAATCCCGGTAACGCGTAAAATGTCCGCTTTCGACATGGCCGTCCATTCATGAATATTGTCGAGCACGCTGACGGGCAATCCCTGGTTGAGAAATTCTATCAGCCGCATACCTCTGTTCGCGGGTAAACCGGCGTAGCGCCAAAGTGCGTTATCAGCAGGTTTCTTGGCGGGTATCCAGGTTCTCATGTTACCTCCTGATTAATGTCATTTGTCATGGTTAAGTATAGCCATTTGTCAGATGGAGTGGAATTGGTTTTTTTTTGTGCAGGGTGGTTTGTGAGAAGAACAATGTTTTGACCCTAATTTTTAACGGTTGTGTAATTCATTGATTTTAAATGAGTATTTTGGGTGGATAAAAAAGAGGGTCAGAGAAGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCA # Right flank : ACATCCTGGTCGCCATCGTCGGGGACAACATCGGTGCACTGCCGTACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACAGGCAGCTTAGAAAAAATTTCGTTAAGCTCCGGGTAGTTGAGCATTGTGCACTGCCGTACAGGCAGCTTAGAAAGATGCGATTTGCTGCGCTGAGGTATCGCAGAAGTGCACTGCCGTACAGGCAGCTTAGAAAGATATCCAAACAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTGCCGTACAGGCAGCTTAGAAAATTGGCTTATTGAATCCGTATGTCT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 10037-10304 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFDUH010000044.1 Enterobacter cloacae complex sp. P13RS 1702009150-2_S60_R1_(paired)_contig_45, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 10037 28 100.0 32 ............................ TAATTCTTTCGTTCATCCCGACTACGGGATAA 10097 28 100.0 32 ............................ AAGACAGCTTAACATTAGCTAAGACGGCTAAT 10157 28 100.0 32 ............................ TTTTGCGGCGCAGATATGCGTGTGATGAATAC 10217 28 100.0 32 ............................ TTACCAGGACAAAATGCACAAAAACATACTAC 10277 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 5 28 100.0 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GGTCGCCATCGTCGGGGACAACATCGGTGCACTGCCGTACAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACAGGCAGCTTAGAAAAAATTTCGTTAAGCTCCGGGTAGTTGAGCATTGTGCACTGCCGTACAGGCAGCTTAGAAAGATGCGATTTGCTGCGCTGAGGTATCGCAGAAGTGCACTGCCGTACAGGCAGCTTAGAAAGATATCCAAACAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTGCCGTACAGGCAGCTTAGAAAATTGGCTTATTGAATCCGTATGTCTTGCGCAT # Right flank : AATGCACCACTCGTACGACCACGACGAAGGGTGTGCACTGCCGTACAGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACAGGCAGCTTAGAAATATACAGTTACAGACGCGATAAGAGACGAGCAGTGCACTGCCGTACAGGCAGCTTAGAAATGTATAACTTGCCCCGCGTGCTCGTCGTCAATGTGCACTGCCGTACAGGCAGCTTAGAAAAGCACGCCCTCCAGGTCTCCGATAAGCACATTGTGCACTGCCGTACAGGCAGCTTAGAAAGCGTTCGTTATCTGCGCATATTCTTCGGTTGGGTGCACTGCCGTACAGGCAGCTTAGAAAAGGTCACAAAAAAACAACAGACGATGGAGCAGGTGAA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [51.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 10518-10725 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFDUH010000044.1 Enterobacter cloacae complex sp. P13RS 1702009150-2_S60_R1_(paired)_contig_45, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 10518 28 100.0 32 ............................ TGTATAACTTGCCCCGCGTGCTCGTCGTCAAT 10578 28 100.0 32 ............................ AGCACGCCCTCCAGGTCTCCGATAAGCACATT 10638 28 100.0 32 ............................ GCGTTCGTTATCTGCGCATATTCTTCGGTTGG 10698 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 4 28 100.0 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ATCCGTATGTCTTGCGCATGTGCACTGCCGTACAGGCAGCTTAGAAATAATTCTTTCGTTCATCCCGACTACGGGATAAGTGCACTGCCGTACAGGCAGCTTAGAAAAAGACAGCTTAACATTAGCTAAGACGGCTAATGTGCACTGCCGTACAGGCAGCTTAGAAATTTTGCGGCGCAGATATGCGTGTGATGAATACGTGCACTGCCGTACAGGCAGCTTAGAAATTACCAGGACAAAATGCACAAAAACATACTACGTGCACTGCCGTACAGGCAGCTTAGAAAAATGCACCACTCGTACGACCACGACGAAGGGTGTGCACTGCCGTACAGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACAGGCAGCTTAGAAATATACAGTTACAGACGCGATAAGAGACGAGCA # Right flank : AGGTCACAAAAAAACAACAGACGATGGAGCAGGTGAA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //