Array 1 41586-48332 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIRBP010000025.1 Halomonas sp. IOP_31 NODE_25_length_55029_cov_85.023822, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 41586 29 100.0 32 ............................. TGAGCCTTCTCGTTGAGGCTCAGGTTCTCCTC 41647 29 100.0 32 ............................. GTCGCCTGACGTCTGTAACCGGCCGCCGGCCC 41708 29 100.0 32 ............................. GTTGACATAAGGGCAGCAGCTAACGAAGGGTG 41769 29 100.0 32 ............................. CCGCGCATGGACCTACTGCTGGCCGACATGCC 41830 29 100.0 32 ............................. CGCCTGCCGGCGTCTATGACATCACCTTCAAC 41891 29 100.0 32 ............................. CAGCGATGCTCGTCAACTCGGGCGTGACAGAC 41952 29 100.0 32 ............................. CACGTCATCGCTCGACCCCAGCGCATCCTTTG 42013 29 100.0 32 ............................. ATGCTGGCGTACTGGCTGGACGACTGGCCGTA 42074 29 100.0 33 ............................. CTCACCATGGAGTCGTTACAGGACATCGCCTAC 42136 29 100.0 32 ............................. TGAGTGCCTCGTAGGGCATAGCCTGTTGTGCA 42197 29 96.6 32 ............................T TGAGCAGCAAATAGGTGTTAGCCAAACGTGGC 42258 29 100.0 33 ............................. GATGGCGAGCTGTACGAAATCAAATCCGGCTCG 42320 29 100.0 32 ............................. CCGCTCGAGTGAGCGGCAAACGCAGGGTGAAC 42381 29 100.0 32 ............................. CCTTCGCCGAGCTTGGCAACGAGATCAATGGC 42442 29 100.0 32 ............................. GATTTGCAGATTGTCGGGTACATGCCTGCCGC 42503 29 100.0 32 ............................. AGGCCGTAACACGAGAGCGCGAGGTATCGGAA 42564 29 100.0 32 ............................. AACTGCTACGACACCCAATCGGGCAACAGCTA 42625 29 100.0 32 ............................. TGCGCGATCAGATCCGGGCCGCTCAGCTCGAA 42686 29 100.0 32 ............................. TCGGTCTTCAGGGCATAGACGGTGCTGCCGTC 42747 29 100.0 32 ............................. CCGACCATGTCGCGGATGTCCGCCTCGAGGTC 42808 29 100.0 32 ............................. TTCCTGCAGAACGGCGAGAAGCAGCTCGAGGC 42869 29 100.0 32 ............................. TAGTGCATGCGCTGGGCCACGGTGACGTTGTG 42930 29 100.0 32 ............................. CTAGGGAGCTAAGACAATGGCAACGCAATCCG 42991 29 100.0 32 ............................. GTATTGGTATAAAACCTGAAAAAGCCGTCAGC 43052 29 100.0 32 ............................. GCCCCCCTGCAGTTTCTCAAAGACACTAGGGA 43113 29 100.0 32 ............................. CGGGCCTTACCGACACCAGGCGGGAATACGCC 43174 29 100.0 32 ............................. AACCCTATAGGCTATATAAAAAATTCTCTATG 43235 29 100.0 32 ............................. ATCAGCCTGTTGCTTCCATTGGTTGAAGTGCT 43296 29 100.0 32 ............................. GCAATCAGACTGGCCCCGTGAACCACATTCCG 43357 29 100.0 32 ............................. TTTGATCTTGTCGTGATCGACGAGGCGCACGT 43418 29 100.0 32 ............................. TCCTGCTTGAGCGATTCCCAGTCGCCAGAACC 43479 29 100.0 32 ............................. CCGAGACTCGCTACAGCTCATACGCAATTGGC 43540 29 100.0 32 ............................. TCGTGCAGCCCGAGCTGCTGCTGATAGTGCGG 43601 29 100.0 32 ............................. GATCTTCGCCATTGCCATCGAGTAGCCGGCAT 43662 29 100.0 32 ............................. TTGAACGGCCTTCAGATCGACCTGACCGCTGA 43723 29 100.0 32 ............................. GTGGCGGCGTTGAGTCTCCCGTCGCCGACTCT 43784 29 100.0 32 ............................. TGATTGTCAGGGAAGGGAAAGGGGCTGTTTCT 43845 29 100.0 32 ............................. CCGAGACGCCTTGACCCTATCGCCGCCCTGTA 43906 29 100.0 32 ............................. CTGCGCGTGCCCGAGGTCCGTGAGCTGAAACG 43967 29 100.0 32 ............................. TAGATCGACTGCAGCGCGCCCAGGTAGTCGGG 44028 29 100.0 32 ............................. CCGTGGATCCAGAAATATTCGTCGAGGTAGGT 44089 29 100.0 32 ............................. TACGAGGGCTCAGGCCGCGAGAGCGATCTAAA 44150 29 100.0 32 ............................. CCGACCGGGTCAAGATCGACGTCGGTCACGCC 44211 29 100.0 32 ............................. TCGCCCAGCGCCTCTGGGGTAATTCTTTCATC 44272 29 100.0 32 ............................. GTCACAGAAGCCCGTCGCCTGCTTCGCCAGTA 44333 29 100.0 32 ............................. GCGGTGGAGAGAGCCGGCGATCTCCTCGCCGG 44394 29 100.0 32 ............................. TCAGCGATGGTGCGAACCTGCTGAGGCGAGAG 44455 29 100.0 32 ............................. GGGGATCTGTAGCAATGCGAGGGAACGCTCGA 44516 29 100.0 32 ............................. TTGGCCCGCGAGGTGCTCGACGACCTGACCGA 44577 29 100.0 32 ............................. TACGATTGCGGCATTCGGTGATCGAGGGTAAA 44638 29 100.0 32 ............................. GTATAAAACACCTTATGAGGCAGCTATTTCTT 44699 29 100.0 32 ............................. CATCGAAACCGGGATCAGAATTAGCGTAAACA 44760 29 100.0 32 ............................. ACCAAAATGGCCAAGTCCGTGCTCGATGCCGG 44821 29 100.0 32 ............................. TTGCTGCTGGCGAGCTTTGAGAGCCTCTTGCT 44882 29 100.0 32 ............................. ACGTTCAGCGACTACAGTCGTCATCCTCTCCC 44943 29 100.0 32 ............................. CCGGGGCGGTGATCAGCGCCGTCGAGAACCAG 45004 29 100.0 32 ............................. GAATCGAGACGGCGCTGAGCGTTACCGAGCTC 45065 29 100.0 32 ............................. TCACAGAACCCCGACCGCAAGCAGTACGACGA 45126 29 100.0 32 ............................. AATCGGCGGACGTGCAGCTTGCTCTTTGTTCG 45187 29 100.0 32 ............................. CTGAACGATGTCGAACAGGGCCAGCACAGTGC 45248 29 100.0 32 ............................. GCGTTCAGCGCGGTACCCACCTCGCCGCGGCG 45309 29 100.0 32 ............................. GGCTCGCCGAGCGCCTAGGCGTCACGCCTCGC 45370 29 100.0 32 ............................. TTTGATCTTGTCGTGATCGACGAGGCGCACGT 45431 29 100.0 32 ............................. TCCTGCTTGAGCGATTCCCAGTCGCCAGAACC 45492 29 100.0 32 ............................. TTGGCTTAGAGCGTCTTCGAGGCTAGTTCCCT 45553 29 100.0 32 ............................. GAAGCCGACGAGCTCGAAGCCTGCCGCCTAAT 45614 29 100.0 32 ............................. TGGAACACCACCGCCCGGCGGAGCAGCCCGTA 45675 29 100.0 32 ............................. CCAGAATTGCTTGGCAACGAGGATCAAGTGCT 45736 29 100.0 32 ............................. GCGAACGCTACGCACTGGCGGCGCATGTGGGC 45797 29 100.0 32 ............................. GAATCCGCATGACCGACATCATACACAGCGAG 45858 29 100.0 32 ............................. AGGTGCGCGACGTGTGGGCCAAGATCGCCCGC 45919 29 100.0 32 ............................. ACGGTACTGGGTCAGCAACGGGTCAGCAAGGA 45980 29 100.0 32 ............................. TCCCCGCCCTACCGGCCAACATCACGGCCCCT 46041 29 100.0 32 ............................. CTCCAATTGCAAAATTTATTTAAGAGCGTTTT 46102 29 100.0 32 ............................. GATAGTGTCGAGGCGCTGGGCGGTAGCTGGAT 46163 29 100.0 32 ............................. CGGCTCATATCGCCTTTGACGCGCTCGTTGTC 46224 29 100.0 32 ............................. GCTGAGCGCGACGCGATCCTCGACCTGATCCG 46285 29 100.0 33 ............................. CCCGTCATCTGCTCCCACCAGTGCTGCACCTGC 46347 29 100.0 32 ............................. TCCATGGGGTCAGCGTGATTCAGGATGAACTC 46408 29 100.0 33 ............................. CCGTTCGCAATAGCAAGGTTCGGATAGTACGAG 46470 29 100.0 32 ............................. GAGATTTACGATGAGCATTGAGAACTCCCTGA 46531 29 100.0 32 ............................. ATGCCGTCAACACGTTCAGCAAGGAACTTGCC 46592 29 100.0 32 ............................. ATCGGGACCAACTTACGCGGGAGCTTAATCTG 46653 29 100.0 32 ............................. CCGCAAACCGTTTCGATCGTGACCTGGCGATC 46714 29 100.0 32 ............................. CGGGTTACCGCACCTGGCACATGCGATGTGCT 46775 29 100.0 33 ............................. TATGCGGAGGCACTGGCCTGACGCGATCCCCGC 46837 29 100.0 32 ............................. GTCGACGGCAACCCGATGCAACCATTAGGTGA 46898 29 96.6 32 ............................C TCGACACCGCCCCCAGGAGCCACATGAACAAG 46959 29 100.0 32 ............................. GCCTAGTGCCCAGAACACCCATTCAGGGATAT 47020 29 100.0 32 ............................. GCGGCATCCGCTGCATCGAAGGTTCTACGGAA 47081 29 100.0 32 ............................. CGCTCTTTCGCCGGCGTCATGGGCGGCCGCGT 47142 29 100.0 32 ............................. AGCCGGTGGCGCCGACGCTGTCGGCCACGGTG 47203 29 100.0 32 ............................. TCACGCTGCCGGCTCTGGTCGTGGCGCATCGC 47264 29 100.0 33 ............................. TCTGTGGTGGGCGAGCCCCGGCACCCTGCGGGC 47326 29 96.6 33 ............................A GGAATGACAAGTGCCTGGCGTCGGTTTAGAAAG 47388 29 100.0 32 ............................. ATCGAGCAGGGCGAATACCGCGCCGACTGGAC 47449 29 100.0 33 ............................. CCAGCAGTACGTAAAGGGAAGAATATGCCTCGC 47511 29 100.0 32 ............................. GCAAGGAAGGCGAGCTATCCGATGCCGATCTG 47572 29 100.0 32 ............................. GGCGCCGCCTGGGCGCTGCGGTGTCAGCACCG 47633 29 100.0 32 ............................. TTTAATGGTTTCCATGTCGGTGTCCTCGTCGA 47694 29 100.0 32 ............................. GTACGGCCGCCGATCATCGACCGCACGCAGGA 47755 29 100.0 33 ............................. GTTGAGGAGCGAAAGCGTGGCCGGCGTCATCTG 47817 29 96.6 32 ............................A CAAAAGCCGCCGCTGGGGGCGTGGGCTGATCG 47878 29 100.0 31 ............................. GCGCGGTCCTGATCCGCCCAGTTCTCGATAC 47938 29 100.0 32 ............................. CCCAACTGTCGCGCCTTGAGTATGATGTCGCG 47999 29 100.0 32 ............................. CCTCGGCGTCATGGCTGTACAGCATGCCGCTC 48060 29 100.0 32 ............................. CCGAAGAACGCCAACGCCAACGGCAGCCGAGC 48121 29 100.0 32 ............................. TCGCCGTATTCCTGCACGGCGGCCAGTGAGGT 48182 29 100.0 32 ............................. TGGCCGTCGTGCCCGTGGTTGTGGGCCTGGCA 48243 29 100.0 32 ............................. CCGCCGTCCGCGCATGTCCGACTTGCGCGAAT 48304 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 111 29 99.9 32 CCGTTCCCCGCAGGCGCGGGGATAAACCG # Left flank : AGATCGAACCTCCACTTCCGCCGGCTGATTCGGTACCGCCCGCTATTCCCGAGCCCGAATCCTTGGGCGATGCAGGGCATAGGAGTCAATGACATGGCGATGTTGATAGTGGTCACTGAAGCCGTGCCGCCCAGACTTAGGGGACGCTTGGCAGTTTGGCTGCTTGAGATTAGAGCCGGCGTCTATGTGGGCGATGTCAGTAAACGTATTCGTGAAATGATTTGGGAGCAGATTGAGGTGCTGGCCGAGGAGAGTGGCAATGTTGCCATGGCCTGGGCCAGCAATCACGAATCCGGCTTCGAATTCCAGACTTATGGCGACAGCCGCCGCGTGCCCATCGACCATGACGGATTGCGCTTGGTGCGGTTTTTGCCGCCTTCCGATAACTAATTGTTTTAAAAGGTTCTTTAAAAATAAAGGCTGGTTAAAAAATGATCGAAATCGCCGGTAGATTATCCGCCGGTGATTTTATCTTTTAGAAACAAGTGTCTATGATTAGA # Right flank : GCATGATGCCACCCGGCGAGCGAGCAAGCCTGACCGTGAGTTCGTTGAGATGTATCCTGACGGTGCGGCCTGCGCTGCGTGGTTGGGCCAATTGCGTTGGCCCAGTGGCTTTGTCTGCCCGGCGTGCGGGACTGCTGCGTCGCCATGGCAGCACTCGTGGGGTGCCTCGTGTGCTCGTCCTGCCGTCATCAGGGAACAGTGACCGCTGGAACCCTCCTGGACAAGACGCGGACGCCGCTGACCACTTGGTTTGAGGCCAGCCGCGACCTCGTATTCCGTCGGCTGCTCGAACAAGCCGTTGTCACCGGGCCTGTGACGCAAGCGCAGGTGACCCATGGCTATGACTGGTGACCACAAGATGTGGGGGGTGGAGGAGCAAACTGCCCACCCCGCTTGGGCAATATCTCCAAATCCACACTCTCCACGCTTTGCATGCCGGTCACGGTGGCCACCAGATCCGTGCAGAAACTATCGAACGCTTCGCTCATTTGACCGGGGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCAGGCGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCGTTCCCCGCAGGCGCGGGGATCAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //