Array 1 34785-35680 **** Predicted by CRISPRDetect 2.4 *** >NZ_NDYJ01000001.1 Finegoldia magna strain 07T609 10c, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 34785 36 100.0 30 .................................... ACGCGATTCTTGAGAGTGGTGCCGCTGATA 34851 36 100.0 30 .................................... TTTCCCTGTGTTAGGTGGTCCTTGAATAAA 34917 36 100.0 30 .................................... AAGTATTCCTTATCATCTTTTGCGACTGTA 34983 36 100.0 31 .................................... CAAGTTGGAGGGGGAGACCGTTCGGAAGCTA 35050 36 100.0 30 .................................... AACTCAAAAAGACGATATCAACGAACAAAT 35116 36 100.0 30 .................................... TGGATAAAAAATTCATATACATCTACACAA 35182 36 100.0 30 .................................... TGCCATGAATGTCGCCATCGATTTCATCGA 35248 36 100.0 30 .................................... CACGGAAAACTAAAAGAGTTGTACGAAAAA 35314 36 100.0 30 .................................... GCTATACTGATATACAAAAACTACGATATC 35380 36 100.0 31 .................................... TTTGTTGCTATGTCGTTGTTGCTATCCAGGA 35447 36 100.0 30 .................................... TTATATTTGCTAAAATAATGGCGATCGGGG 35513 36 100.0 30 .................................... TTCAACTGCATTTCTCAAATTAAAAAATGT 35579 36 100.0 30 .................................... AAAACGGCGTATAGGGTCTCGGGGTTCCCT 35645 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 14 36 100.0 30 GTTTGAGAATGATGTAATTTCATATAGGTATTAAAC # Left flank : ACAAGAAAATCACTACAAAAATTATAAAAGATTTAATAGAAATTATCTCAGATGAAAAACATTACGAACAAAAAATAAATTTAAACTCATCAATTGTTAATTTTATTAACGACATTACACTAGATTATCCGTATATGTTAGAAATCGGTGATGAAATAAATTTTGAATCATTATTAAAAGTAGTTCCAATTAAACCAAGTGTAGATTACACAGATTTCCTGGATAAATTTGTTTCTTTTTTAGACATTTACCAAAATGTTTTGAAGATAGATGTATTCTACACAATAAACTTATTGCAGTATTTTACAGAAGAAGAGCTCAAAGAATTATCTGATTACATTAAAATTAAGAACATTTGCATAATAAATTATGATAATATATTAGTAGATAGCAATTACATTTCCAAAAAATTGCTGTTTGATAATGATTTATGTAGAGTTTTATAAATATTTATATGAAATTACTGCTTTGATGGAGTGATTCTCCCTCATGGATTTGAG # Right flank : CGAATGGATGTGGTTTCACTTCCTCAAGCTTGTTTGAAAATGATATAATTATAGCAATTAAGAGGTCAAAGAGGTGCTTTGCATGAATAACAAAAACAACATAGATAGAGTTCATGATGATGTTTTTAATAGCATCAAAATATTGATGGATAAGGCAAGAAATGAAGTTGCAAGAGAAGTCAATAATATTTTGGTGCAAACTTACTGGGAGATTGGACGTATTATCGTAGAAGATGAGCAAGGTCATTCAGAAAGAGCAGAGTATGGGAGAGAGCTTATAAATGACTTATCAAGACAACTTACAAAGGAGTATGGTAAAGGATTTTCTAAGTCTAATTTATTTAATATGAGAAACCTATATTTATCATATCCAATATTCCAGACACTGTCTGGAAAATTGACCTGGTCCCATTATTGTGAGCTTTTATCCATTAGCGATGAGAAAAAAAGAAGTTTTTATGAAAAAGAAAGTATCAACGCAAATTGGTCGGTAAGAGAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAATGATGTAATTTCATATAGGTATTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GTTTGAGAATGATGTAATTTCATATAGGTATTAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.30,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //