Array 1 96705-94180 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAFCL010000004.1 Klebsiella pneumoniae strain 9-44 NODE_4_length_345906_cov_47.970286, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 96704 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 96645 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 96584 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 96523 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 96462 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 96401 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 96340 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 96279 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 96218 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 96157 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 96096 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 96035 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 95974 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 95913 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 95852 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 95791 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 95730 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 95669 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 95608 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 95547 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 95486 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 95425 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 95364 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 95303 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 95242 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 95181 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 95120 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 95059 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 94998 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 94937 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 94876 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 94815 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 94754 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 94693 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 94632 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 94571 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 94510 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 94449 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 94388 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 94327 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 94266 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 94208 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 42 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //