Array 1 63571-63138 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJEE01000008.1 Gracilibacillus thailandensis strain TP2-8 contig8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 63570 36 100.0 30 .................................... AAAACTGAATTAGTGGAGGAAGATAAGCAG 63504 36 100.0 30 .................................... AACATGGTTGATGGGTTAGAGATAGCTGTT 63438 36 100.0 30 .................................... GATCAGACAGGAAGATTCTTTAAAAGATAG 63372 36 100.0 30 .................................... TACCCCATTTAATTATTGGTAGGCAAGGAA 63306 36 100.0 30 .................................... CGATGAACGTATCGGATTTGACCAAGAAGT 63240 36 100.0 31 .................................... AATGTATAATCAATAGCATATCTGATAATCA 63173 36 94.4 0 ..................................CT | ========== ====== ====== ====== ==================================== =============================== ================== 7 36 99.2 30 GTTTTAGTACTCTGTGTTTTTAGGTAGTAATGAGAC # Left flank : TGGAGTTGGTAAAACACATTTGGCGACATCGATTGGAATAGCTGCAGCTAAGAATCGTAACAGTACTTATTTCATTAAATGTCATGAACTCATTCAGCACCTAAAAAAAGCACGGGCCGAGAATAGATTGGAAGCTCGCTTAAAACATTACAGGAAATATAAACTATTAATTATTGATGAGATAGGGTACCTTCCTATTGATCAAGAAGATGCCAAACTCTTCTTCCAACTCATTGATATGAGGTACGAGAAGAAAAGCACCATCCTGACCACCAATGTTAATTTCAAGCAGTGGGATGAGGTCTTTCAAGATTCCAAACTCGCTAATGCCATTTTAGATCGAGTTTTACACCACGCTACAGTGGTAAATATCATAGGTGATTCTTACAGAATCAAAGATCATTTGGATAAAGAAAATGATTAAAATTGTACATTCTTAAACAGTCAAAACTGTACATAATTAACTTGACATTTATATAGAAATAAACGTTGATGGTCTT # Right flank : ACCATCATATCTTTAATGCTTTTTGAATAGTTTTTAGAGCATTTCTTTACAAAAAAGGAATGCTCTTTTTTATATCTTTAATATGTGTAATTTATATTTATCACAATAAAAAAATAACAAAAAACAGTAATTTTTTATTGGTAAACGATAAAAATATGCTATAATTCAAATGAAGAATAATGAAATGAGGTGCTTTTTGTGAAACAAGGTTCAACGCTTTTTTTAAAGATAGCTGTTCTATTTATTGGAATTCCAGTTCTAGCTTTGTGTCTATTTGGATTAGTTCAGTTAGCTAATAATCCAGTAAATCCCGATTATGCTCATTTACTATATCCTATTGTAATAGGGATGTATGTATCAGCGATTCCATTTTACATGGCATTGTATTGGGCTTTTAGACTTTTAATCTATATTGATAAAAACAAAGCTTTCTCGCAAATATCTGTTAAAGCTTTAAAGAATATAAAAAATTGTGCTATCACAATCAGCAGCTTGTATGT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTGTTTTTAGGTAGTAATGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.10,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 66879-65788 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJEE01000008.1 Gracilibacillus thailandensis strain TP2-8 contig8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 66878 36 100.0 30 .................................... GCAGGTATTTGCCATTGTTGCATTACTCTA 66812 36 100.0 29 .................................... GTTTCTTGACGTTGCATTCGTTTCAATGC 66747 36 100.0 30 .................................... ATGAATCGTGATGGGTTCACTTTACTAGTA 66681 36 100.0 30 .................................... ATAACCAAGTTCTTCTCGTCCTTTTGTTTG 66615 36 100.0 30 .................................... AATGTAGTAATGGAGTATGCGAATAGTATA 66549 36 100.0 30 .................................... CAAGTATCGCAGAGTATCGAACCTGTATGG 66483 36 100.0 30 .................................... CAGGTAAGGATCACACAGGTGTCGTGTATA 66417 36 100.0 30 .................................... CTCTCCAAAAATAAAACGCCTTTCCGATAA 66351 36 100.0 30 .................................... CCGGCTTGAATATTTGGCGCTCCTCGTCGG 66285 36 100.0 30 .................................... TCCGGATTAGGATCATCGGTGCCACTATCA 66219 36 100.0 30 .................................... GACGATTTAAAAACAAAAGCAACTGGTAAC 66153 36 100.0 30 .................................... GAATTCATAGGATATAAGATTTAAAGGAGG 66087 36 100.0 30 .................................... AAAGATTGCAGAATTTAAGCATCATACATT 66021 36 100.0 30 .................................... TATATCGAATAATTTTTGTCCTAAATGTTT 65955 36 100.0 30 .................................... CTCTCCAAAAATAAAACGCCTTTCCGATAA 65889 36 100.0 30 .................................... TTCACAGCTACCCACAAATTATATTTATTT 65823 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 17 36 100.0 30 GTTTTAGTACTCTGTGTTTTTAGGTAGTAATGAGAC # Left flank : TTTAAAACAACCTGGTATTGTATTTTTCTTCTATCCCGAAACTTATTTGAGTCCAAGAGAACAAAAAGAAATGTATGAATTATTACAAATATTCAGTAAAACAATACCTGTATTTGTTATAACTAAATCAAAGCAATTTTTAACTAGAGAAATGTCAGGAATGAATTACTTTATTCAAAGTAAGCAGATATTTAGCAGTAATTTTATTGAAGAATTAGAGTGGAATAGTCCAGTTAATTTTGATTATTCAGCCCTTCAGCAAAGTATAATGTCAATTTTATATAGGTATGCTGATGTTTTTGAGTTGAAACCCGAGTTATCAAACTTTGAGGATGCTGAGGTGGTACTATTTAGATCTATAGATTTGTATGTATTTAGCTCACTTATGTATAAAATGAAATATAAATTTTCACTAAATCTAGATGGTAACCAAATGTATAAGCCGGTTTATGAGTATATAATGGAACTTTATGAAAAAGTTTGATATATTTTCATTAGAG # Right flank : GAAGAAGTAGAAATATATAAATGCTAGTTTATAAATGTACATAAATGATCATTTAAGAATGTACAACCCTGACCGATAAATGCATACTTAATTTGAGGTGAGGAGAATGCATTTATCGATTAATTTAACAACTGACTTTAAAGTGGATAGTCTGACAGACTTATCCAAATATAAACTAATGATGGAGAGTCTTGGGATGAAAATTAATAAGAGTGAACTAGCACGGCAACTAAAAGTCGATCGACGAACAGTTGATAAGTATTTAAATGGATATGTTCCTAGTAAGTCCAGAAGGAGGAAATCTAAAATAGATGATTATTATGGCGTGATATCCCTTCTTCTTTCAGAAGATTCACCGCAAGTCTTTTATTATAAGAGGGTGTTGTGGCAGTACTTAACAGATAATCATGGATTAGATTGCTCACAATCTCGTTTTAGAAGTTATATATCTAGTAAACCCGAGTTTCAATCTTATTTTTCCAACGGAAAACGAACACCTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTGTTTTTAGGTAGTAATGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.10,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [80.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //