Array 1 1077767-1073333 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026721.1 Fervidobacterium changbaicum strain CBS-1 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================= ================== 1077766 30 100.0 43 .............................. GATAAGTCTTGAAAGAGCGCTAACTTCACTCGCCATAAGCACA 1077693 30 100.0 37 .............................. TGAAAAGACAAACAACCTACATACTCAAACTCTGAGA 1077626 30 100.0 41 .............................. TCAAGGATATCCTGCCACTCTTTGTTTTTGTTATCCATACC 1077555 30 100.0 39 .............................. GTAATACGTATATACGAATAAAAAAATACACGTTATAAA 1077486 30 100.0 41 .............................. TTGGACTGTTAACATTCAGATTTATTAACGCTTTTTGCATA 1077415 30 100.0 45 .............................. ATGATTTTGTCAACTTCTTCAGAACTGAGACCCAAAATCAATACG 1077340 30 100.0 40 .............................. TTTTATCACGTGTATTTTTTCTTGTCAAGTCTTTTTTTCT 1077270 30 100.0 33 .............................. TTTAGGATTGTAAGCAACACGATTGTTGAATAA 1077207 30 100.0 41 .............................. GATGGCTATATGGTTCGAGGTAATAATCTTCGACTATTTTC 1077136 30 100.0 44 .............................. GAAATGTATTACGTGTATTACGTGTGTAAAAAAAATAAAAACTT 1077062 30 100.0 39 .............................. TTTTTCCATACCTTTATTCATCTTCTGCGCAACTACAAA 1076993 30 100.0 42 .............................. CCGTCTATCACGAAAAACCTTCTCGCTGTTTTGGGTATCTCG 1076921 30 100.0 36 .............................. TGTGTCTGCATCTGCCCATCCTGCACCCTCAAAAAT 1076855 30 100.0 44 .............................. GCAAGTGTTATTGTCAATTCCGCATGTGCGGTCGCATCTCTTTT 1076781 30 100.0 42 .............................. GCCTTACCATACCTTTCAACCCCTTTCTGATAAGTATTTTGT 1076709 30 100.0 39 .............................. CCTTCTTGCTCTTACGGGTATCTCGCTTACATGCATTTT 1076640 30 100.0 38 .............................. TCGAGTTTGCCAACAATAAAATCATATTGTGGATGAAC 1076572 30 100.0 43 .............................. GGACAATAATCCCTCCGAACTCCTTGACTTTTTCAATTAAAGT 1076499 30 100.0 41 .............................. TCTAAATACTCTAACACACGCTTATAAAACTTTTGTCGTTG 1076428 30 100.0 41 .............................. ATATCCTGCAATTTGTAATAAAATTATCACCCCCAAATATA 1076357 30 100.0 43 .............................. TAGAAATAACGTAAGTCATAGAAGATTTACCAATAGAACTTTG 1076284 30 100.0 41 .............................. ATATCCTGCAATTTGTAATAAAATTATCACCCCCAAATATA 1076213 30 100.0 43 .............................. TAGAAATAACGTAAGTCATAGAAGATTTACCAATAGAACTTTG 1076140 30 100.0 39 .............................. TGTAATATAGACCTCTGTACCTAAAATTTGTAAATTTGC 1076071 30 100.0 42 .............................. TTTAGTATTGCCACTACCTCTACTACCTCCTACTACTACCCC 1075999 30 100.0 40 .............................. TCTAGCATATATGCGTACAAAGCTGTTTGAAGGAGTGAGC 1075929 30 100.0 37 .............................. TCTTAAATCCATTCGACCACCTCCCGTTCTTATATTT 1075862 30 100.0 33 .............................. TCTTCGAGCTCTTTTAATGTAAATTTTTGTCTC 1075799 30 100.0 37 .............................. TAAAAGCAAGAGAAGGAAAATAAAAAAAGCAAAATCC 1075732 30 100.0 40 .............................. TTAACAAACGCTTAGGCTTAAACAACTGCCTAAGCTCTAC 1075662 30 100.0 36 .............................. TGTTTTTCATACCACAACATGAGCGACGTCTTATAT 1075596 30 100.0 44 .............................. CTATAGTTTCAATCGGTAACATTTGTCCGTAACGTACTAACTTG 1075522 30 100.0 41 .............................. CTGTAGCATGTACTCCACAGCTTGCTCGTCGTATTCGAAAT 1075451 30 100.0 45 .............................. CAAAAATGTGACAGATTGACCTGTGCACAAGTCAATTAATTTTTT 1075376 30 100.0 36 .............................. TTTTAAGCATTATCTTATTCCCAGGCACTGCAATAA 1075310 30 100.0 36 .............................. TTTTATATCACTCTAACAAATACCCTTGTGGTATAT 1075244 30 100.0 38 .............................. AAAACAACCACTAAACCTAAACCGTCACTCTGAAACCT 1075176 30 100.0 38 .............................. CGTATTTGTTTTTGAGGTATTCAAATACACTTACTACA 1075108 30 100.0 42 .............................. TATACCAAAAAGTCATCTTTTCCCGCACACTTAAACACAACC 1075036 30 100.0 40 .............................. GTTGCCGTCCTCATCGAGTACCTGAACAGTGCCCTGGAAA 1074966 30 100.0 41 .............................. CCCAAGAGAACCTAAACTTAAAATTATCTTTTTTTCTACCA 1074895 30 100.0 39 .............................. TGAGACTGTCATACAAGTTGAGAAATTCATAGAACACTT 1074826 30 100.0 40 .............................. GTACCCTGGGGTGAGGGTTATGTATTATGCCGTATTTATT 1074756 30 100.0 42 .............................. CCAGGAACGTTTTCCCGCTCCCGGCTGGACCCCTTAAAATAG 1074684 30 100.0 41 .............................. CTTCCAAATCGTATGTTACTTCGAACCATGTGTATACGTTG 1074613 30 100.0 36 .............................. TTGATGAATAGTTCTGCTGTTTCAGTTGCTTTTGAG 1074547 30 100.0 40 .............................. CATATTTACGAATGCTTTCAAAATCAAATTCAAAGTCTGC 1074477 30 100.0 39 .............................. CAATCGTCACCGTGTTTTACTACTATGAAACTTTCGTCG 1074408 30 100.0 40 .............................. TTCGAGGCACCAAAGATTCTATGGAAACGAACAACAACAA 1074338 30 100.0 43 .............................. TGATAGCCTTGCCTGGGAAAAACAAAAAATTTTAAAAAAGGAG 1074265 30 100.0 40 .............................. TTAAGAAATTCTAGTAATTTTGTAACTTTTTCAGGAGAAA 1074195 30 100.0 41 .............................. TTGTAGCTTGTTCAGAGGAACCTTCAATCCAATTCCATGCA 1074124 30 100.0 41 .............................. ACGTAATCGAGGAGTTTGTACTCGTCGAACAAATAATCTAA 1074053 30 100.0 41 .............................. CCATCAACTTACCCAGCCGCATTGCGTCCGTTGGCTCTTCC 1073982 30 100.0 38 .............................. CGGTAGACAAGAAGCCTAATATTACTTTTACTAATAAC 1073914 30 100.0 40 .............................. CTTCAATCAACTCATTGACGTAGTGAACAACATTGTCTTC 1073844 30 100.0 39 .............................. AAAGTAATCTCTTCGTCGTTCTGCGCAAAAACATAAACA 1073775 30 96.7 39 .............................C AGATTTCCCCGTATGAGACTTCATTTTCCCAGTATGAAA 1073706 30 96.7 42 .............................C CCAACCTTAATTCCCGTTACAATCTTCCGCACCATACCACTC 1073634 30 96.7 40 .............................C AAGTTTGTGTCTGGGATGTTGTAATCACGCATCACCTCCT 1073564 30 96.7 39 .............................C CTTTCGTTAGCATCGTTTGTTCTTCATCTAAATATACAT 1073495 30 96.7 34 .............................C ACCGAGTTATCGACAATAAAAACTTTTAAAAACT 1073431 30 96.7 39 .............................C CTGGATAAGGACCTGGTTATAGCCTTCAATAATAATTCG 1073362 30 96.7 0 .............................T | ========== ====== ====== ====== ============================== ============================================= ================== 64 30 99.6 40 GTTTTAGAAGTGACTATGAGGGATGGAAAG # Left flank : TTCGTTTAAATAAAAGCAAATAACTCAAACAGGAAAACGCCAGTAGAGCAAACTGGCTTTTTTATTTTAGCATCATTCGTAATACATTTGTAATGTTTAATTGTGAGTCTCATTTGAAATATTTTATACACCAATAGCTATACGACTGTATGTAAAAACTATTATAAATAAAAGATGAAATTCAACACATCTAATCAAATACACGAAATGGAAACCTAATATAAATATTTATTTATACAAAAACAAAGATAAATACAACACATATTTTCACCGTGACTTCATATTTTATTAACACGAATCAAAGTAAATATAATTTGCGATGTTTTTAAAATACTGAATGTAACGAATATATTAACTCACAAAAAATTGCCGACTTTTGCCCCCTTTCCTGGAAGCATTGTTGAACCAACAAGCTGATAAATAAATACTTTCTGTTTGTTACGAATGTAACTTTCATTTTTAACAAAAATAGTGGTATAATATCTATGCATACCCTACGG # Right flank : GCTTGCACGGTGACGCTGTGTTTTTGTTCTATTAAAGTAGGAAAGGCACTTCTCTCTGAAAGAGATGGAAATTTTCTCCGTTTGCCTCGAACCGTTGCAAGTACTCTATGTAGGTAGGAAAGGCACTTCTCTCTGAAAGAGATGGAAACGCGCAGGTCATATATCTGAAAACCTACACATTATCGGGGAATGTGGGAGTATGGCGTTCTGGCCGTACAGAGATATCGTAGCACTCAGCGGGCTGATTGCACTGGCTGAAAGTTACGGTGTGAAGTGTACGAATAAGGCTATAAGGTATTTGAAGAAGTTTAAAGATATTATCCCAATAGTAGAATTTGTGATTGATGAAGTAGTAAATGCTTTCCGTGAACCCAAGCTTTTGCTTGATACAGTGACTGATAAATACAACTATGAAATTCTTGCTTTGTTTGTCAGCACAGACGAAGAATTTGACGAAGCATATGAGAAGATACTTTATATTTGACTGAGATATTTAGATG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTGACTATGAGGGATGGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 2 1097313-1093972 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026721.1 Fervidobacterium changbaicum strain CBS-1 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================ ================== 1097312 29 100.0 42 ............................. TTCTCAATTCTGTCCTGCCTGAGTTTGTCACTCGGAATGTAT 1097241 29 100.0 48 ............................. TTACGTTATTTTTCTTCCTGTCACCAAATTTTCTGGTATCTTGTCTTT 1097164 29 100.0 41 ............................. TTGCACTTTTGTTGAGCTTATAGCTGGCTGGCCGTTGACAG 1097094 29 100.0 40 ............................. TTTTTTTAAATATATTTATTATTTTTATTTTTTAAAATAA 1097025 29 100.0 37 ............................. TCCATTCAACTTCACCCCCTTTCTATGATGTAAATAA 1096959 29 100.0 35 ............................. TTCAAAGACTGAAGTTGTTGTTGAATTTCTTCAAT 1096895 29 100.0 42 ............................. TCAAACCAAACCAAAAGCACCTTCTTCCAACGTCCCAATCAT 1096824 29 100.0 39 ............................. TAAAGCCCTCCCTGCAATTAAAATAAATAGATTAAACTC 1096756 29 100.0 39 ............................. TCTTTACGTTCACACTCTATCCCTCCTTTCCATTATACA 1096688 29 100.0 41 ............................. TTTTCTATCATGGATATATAATTGGAACCACAATATTTTTT 1096618 29 100.0 42 ............................. TATTTTGGTACTCCACGACTTCAAAGTTGCGTTTCCCATCAG 1096547 29 100.0 41 ............................. TTCATACCGTCCTTGTAAAATCGTGTATGGTGCTATGTGAC 1096477 29 100.0 44 ............................. TTTCCAGTATGCGAGGCTACCATCGGCATAGGAATTAAACCCTC 1096404 29 100.0 43 ............................. TTCTAATTCATTGAGTGTGTTTTTTGCAAGGGTTTGTGCGTAT 1096332 29 96.6 43 ..................G.......... TACTACCTTTGTAGCGATGTCGTCTTTGATTTCGAAAAATCTT 1096260 29 100.0 36 ............................. TACATTCGGGGGTATGTTAACATACCATAGCGATGA 1096195 29 100.0 44 ............................. TTTGCTTCTTGCCGTTTGATGTAGGTTGGGGTTTGTTTATATTC 1096122 29 100.0 45 ............................. TTTTGGTACGTTCTCTCTTTCGTTCCCGCAGCGGTTGGTTATAAT 1096048 29 100.0 39 ............................. TTTCCCGCAGCGGTTAGTTTAGTTACAATCTACGGTAGA 1095980 29 100.0 45 ............................. TAAGAGCTTGGGGTCTTCCCACGGATAAACATGGAATATTCCACG 1095906 29 100.0 43 ............................. TCATGGCTATATGGTTCCAAATAAAAATCTTCGACAATTTTTG 1095834 29 100.0 41 ............................. TTTTTTTCAGTGTAACCGTTACCGTCTATCACGAAAAACCT 1095764 29 100.0 48 ............................. TTTTTGTACCTTTTAAGATAATATTTAACAACCGCGAAAAATTCTTGG 1095687 29 100.0 33 ............................. TCTTTCACAAAAAACCTTCTTGCTCTTACGGGT Deletion [1095626] 1095625 29 100.0 44 ............................. CGGTAGTTTTTGCTTAATCTTGTCTCGTAAACATACCATAAAAT 1095552 29 100.0 42 ............................. CATTCTTCGTTTCCAGTTCGACACCTGCAAACTCAAAACTCC 1095481 29 100.0 43 ............................. CCTTTAGGAATTTCACCGATTTTTTCGAGATACAGTCTTAAAG 1095409 29 100.0 38 ............................. CATTGACCTTTTTATTCTTTGCGTTTTCTAACATCCAT 1095342 29 100.0 42 ............................. CTGGTCTTTTATGAAGTCTGTGTGAATTAGTGGTCTCAATCC 1095271 29 100.0 41 ............................. CTGTCAAGAGTATTTCTTTTAAAAACTTGCCTATTAACTTT 1095201 29 100.0 40 ............................. CTTTTGGCACGATTAACAACAAAGCTGTCATCAATACTAT 1095132 29 100.0 42 ............................. CTTTTCTTTTTCATTTTTTCACCCTCCGTTTCCTTTCATATT 1095061 29 100.0 40 ............................. CTCGCCTGTTTTGATGTCATAAACTACATACTTATTTTCG 1094992 29 100.0 44 ............................. CAACTCATAAGAGTCCAACGATTTAAACAGTTCCATTAGCTTCG 1094919 29 100.0 42 ............................. CTAAGTGGACGGTTCGTAATATACAATCCCTTCTATTAGGTC 1094848 29 100.0 44 ............................. CTCTTTATTTCAACCACTACTGGTTCATTATTCACTACTGCTAT 1094775 29 100.0 38 ............................. CCTTCAACCGACAGGGGAAATAAAATTGCTCTTAATAA 1094708 29 100.0 47 ............................. CACAAATAATTTGAACAACTTGTTCATCAATTTCTACAATGTCATAG 1094632 29 100.0 41 ............................. CTTTCCTTGTCTACCTCTTCAGTAGACAAGGAATTTAAAAT 1094562 29 100.0 38 ............................. CCTTTTACATACGTGTAGTCTCCATACGCTAACACTAT 1094495 29 100.0 42 ............................. CAACCTTTACTAAAAGCTCATACCCTCTGTTCCATTCCATCC 1094424 29 100.0 44 ............................. CTTTCTCCATTGTCTTTTCGGAATTCCAGTTCATAGAATTGTTC 1094351 29 100.0 40 ............................. CAACCGCGCCAAGTTATCAACAAAAACCTTCGTATCAAAT 1094282 29 100.0 42 ............................. CAAACACCTCGTCCCCTTTTTTAAAAACAACCCACTTCACAC 1094211 29 100.0 44 ............................. CGTGCCTTCGCACGCTGACCGTGGATTAAATTCAACGGCAGCGT 1094138 29 100.0 39 ............................. CTCGCCACTCAAACCTGTTTTTTCGAGCCTGCTCTATAT 1094070 29 96.6 41 ....C........................ CTCTGAGCTTTCGTTCTGCCAGTTCGACCACCTATATATGT 1094000 29 93.1 0 ...............G...........G. | ========== ====== ====== ====== ============================= ================================================ ================== 48 29 99.7 41 GTTTTAGAAGTGACTATGAGGGATGGAAA # Left flank : TAAAGAATTTGGAAAAACTAAAATTGTCTAAAATAAATTTTTATGCATTACATTGTATATTTATTATTAACATATAACTTTATATTGCATTTGTAAGATTGCATTTGTACTCAAATTCAAGAGTGTACTTACGCGAACGTTTATTCATTCGCTATAATAAATTGTTTTTTGTAACAGATTATAACTTCTATCATCATTTTTTATATAATAAAAACTTTTTAGTAATTTTAAATCAATACATACACAAAAGACAAAAAAAGAACACTCCCTCTTTTACTTCATACTGTGTTAACACATATTGGATATGCCTTAAAATACGATATGTTTGTAAAGATATTTGTAACTATTAAGTAAACAGGCAAAACTGTCTCTGTTTTCGAGCTCCTTGCTAAGAAACGAGGAAATCGAAAACACGCATAAATTGAAACTTTTCTATTGTTACGAATGTAACGTTGACTTGTAACAAAAAATATGATATAGTATTCATGCATATCTGACGA # Right flank : TCTCAGAACATGAGATTTCTTAATGCAGCATAGCAAACCTACATTTCGGTTTGAGAAAATTCTTAAGCAGAACTGAACTCAATGATTAATATAGTGACAAGGTGTGCGCCTTTGGTACACACCTTTTTTTGTTTCTAAATTACAAGCAGCAGAGGGGAAAAGGTGTCGCAGAGATTTTTAGAGAAAATGTCCTGCTACAACTCGTACAATGTTTGGGATCGAGTAAGCTTGGAAATAGTTTAGTGATTCCTCAGGAAAAGCGTAGGAATAACAAGATTCAGTCAAATTTCAAAAATTCATTTCATCTTAGAAAGGTAAATGTGCTATAATGATATTGAAAATTACGAGTAATGTTTATTGTATCATTGCCCAACTTGTGGGAGATGATAACTGTGAGTTTCGTTACATTGTTGAGGAAAGATTTAAGGAAGTACATTGAATTCGTTCAGTCTGGGTTTATAACTCCTGGAGAAGTGTTGGCAGATTTCTCTCGTTTAGAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTGACTATGAGGGATGGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //