Array 1 273693-274385 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIUT01000001.1 Paenibacillus solani strain FJAT-22460 super7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 273693 32 100.0 34 ................................ CACTATCACTATAGATCAAACAGCTCCAGTTATT 273759 32 100.0 33 ................................ ATCTATCTGCGGCCTAATACCAGAAACTAGCTC 273824 32 100.0 35 ................................ AGATAGATTTGGTCGTTAAGAAGTCGATCTTGAAG 273891 32 100.0 33 ................................ AATAAAGCGATATAGACCGAGGGAACAAGGCGG 273956 32 100.0 34 ................................ GATTACGACAAAGAAGGCAAAGCGGTTATGAAAG 274022 32 100.0 34 ................................ TTCGTCTTCTAAGAGGTCATATTGCTTGTCTACT 274088 32 100.0 36 ................................ CTCCGGTGCTTGCACATCAGTGGACGGCTGTGTGTC 274156 32 100.0 34 ................................ AATGATTGTATATTGGATACGTTATTATAGAAGG 274222 32 90.6 34 ...........C.......C.....A...... TTCTCGAGCACGGGACGTTCAGCGAAATACTCTT 274288 32 93.8 34 .............A.....C............ CATGAAGAAACAAGCTTGTTCTCAACGTTTTTAA 274354 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 11 32 98.6 34 GTCGCACCCTTTATGGGTGTGTGGATTGAAAT # Left flank : TATATTGCGTGATTCGGGAATCGACCTGCCAATGGTCGGGATTGGTGGGATTACCGCAGAGCGCGTGGAGGAAGTTCTCTGCGCAGGAGCGGATGGCGTCGCCGTGATCTCGGCCGTGACGAGGGCGGAGTCAGCGCGGGAGGCAGTGGAGACCATTGCAGGGGCATCTGAACGCTTTTTCTTGAGAAAGCTCGCTAACCATTAAGAGTACTTACAATATAAAGAGTGTCGAATGGATACCGTTCGACACTCTATATTATTTTAGAGATTAGTGTATGCGCTCTGCCTTTCCTTCTACATACCATTGAAAAAGATTCATAAAAAAAGCTTGGTGCGAATGTATAGTGAACATGAATTTGCTAGGAGATTCGCACCAAATATTTAACATATAAACCCAATTTCGTTGCTTTTTATTGTGGGATTCTATGGAATTCGTAATCAATCTTATGTATTTTATATGTATGGGCCATTTTTTAATGTGAATATGTTAAAAAATCGGA # Right flank : TCTTATCTCCCGGCTTAATGGTGGGTATTGGATCGGTCGTTGCACCCGAGGAATGAAATGAGAAATGAAGCTGGGTCGATCTACTATGGCGCCGCTCATGTTCTGTAAACTGCAAAAAAGCTTATTCCAACTGGAATAAGCTTTTTTGCATGCTCAACACTAAGAAGAACGAAACAACCCGGACGAAAAAATGAATGACCCCAGATCGAATGTTGCAAAATCATGAACCAAAATGTAACAAAAAGCAGAAAAATCACTGGAAATTGAAGGGGATAGAAATAGGTCTGTAGAATTAATTCAAATTAGGTAACTACTCTAGAAATTATCTATTAATATAAGTAATTTGCACTAATGAAAGCATCCGAAATTCTGGACTTACGGAGGTGAGATAATAATATGAGATATATTGCACATATCCGAGAAAGTGACCATCAGGACCAATATGTGGAAGATCATCTCCATGGGGTCCAAAGTTTGGCAGAGCAGTATGGGGAACGAAT # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTTATGGGTGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 2 283982-285278 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIUT01000001.1 Paenibacillus solani strain FJAT-22460 super7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 283982 32 100.0 35 ................................ TTTAAATGGTGTATCTGGAAACAACTCCATCACCC 284049 32 100.0 33 ................................ ATGATGTATCGAAGCTGCTAGATGGCTTTTCCC 284114 32 100.0 34 ................................ CTCATCGCCATGCCAGATCCGAGAGCCGTTAACC 284180 32 100.0 34 ................................ TTGAATTAACGATGATGATAGCAACGCCACAATA 284246 32 100.0 33 ................................ TCCAGCCATACGCCTTGATCCATGAAGATATCC 284311 32 100.0 33 ................................ ATTATGGAATGGCGATAGCAGAGTAGGTTTCGC 284376 32 100.0 33 ................................ GTCATCACAATTATCCTCGGACGTGTGAACGGA 284441 32 100.0 34 ................................ TCCCAGGTCCCGCAGTACTGGTGACTGCTCTGCA 284507 32 100.0 34 ................................ CTCGATGTCAACGCGTGGCAAAAAGACTTTAACG 284573 32 100.0 39 ................................ ATTAAGTAATATATGGTAGTCGATAAATGATATATAATG 284644 32 100.0 35 ................................ CAGTCTCCCGTAAAGACGCCAGCGATAAACTCAAC 284711 32 100.0 34 ................................ GTAAAGCCGCAGCAGGCATCACAATCAAGAAAGC 284777 32 96.9 34 ...............................A TATTTCGAAAACAAATGATAGGGAAAGCAGCGCT 284843 32 96.9 34 ..............A................. ATGTTTGAAGTGGTCTGTTCTCAGAACGTTTTTA 284909 32 100.0 36 ................................ GATAAGATCGGAGCTTCCAAAGATAAAATCGCCCAG 284977 32 96.9 36 ................A............... TACGCGAACGGCAACCGGGCGCTGTGGTTTGATATC 285045 32 96.9 35 .............C.................. ACAGGAGATGCCGAAGCCCGCAGCGAGGCCGACGT 285112 32 96.9 35 ..T............................. TTTGGTGGAGTATAACTGATCTCACATGCAATATA 285179 32 93.8 34 .............C.....T............ CCAGCGGTGGCTGCACACGTAACCGGGAATGCTC 285245 32 75.0 0 ........T....C..A.A....A...C..CA | C,A [285270,285272] ========== ====== ====== ====== ================================ ======================================= ================== 20 32 97.7 35 GTCGCACCCTTTATGGGTGCGTGGATTGAAAT # Left flank : ATCAGTTGGGCAACCATTATAAGAATAAGGTTGAGCATGTTGGGATCAAAAAATCGCTGGATATGGAAGGCCTCTTGATTCTGTAGTGCGAATGCCAAGCGAACATGATTTCCCTGGGTGATTCGCACCACATAATTACCAATAACATATTTTAATACAAAATTATGGATTGAAATTTTTCCTGAATATTTATTATAAAGTTAAATATGACGGGTTTTCGGGCTCATATGCATCGAAAATCGGAGTCGCACCCTTTATGGGTGCGTGGATTGAAATTTTAACTTACTGGATGACTTGAACAATCTACTTAGTCGCACCCTTTATGGGTGCGTGGATTGAAATAACGAAGGGCAGCAAGGTTGGGATAATGAATTCCGTGTCGCACCCTTTATGGGTGCGTGGATTGAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATGGGTGCGTGAAATGGAACTCGCTTATCGGTTAGTTCCTATGAGCGGA # Right flank : ACAAATTCAGATAACTTTGTTAAAGGCTATATTTCTGTATTCACATAAACCAAACTCAGGTGATATGGGCTTTGGAAGGGATCTGATAAATACATTCATTTATCATATCTGTAAGATGTTGCTTCAGCGTCTGCGTTGTCATAAGGGAAACTATCCATGCTCAGAAAACGATTAATCTGAGAGGCTTTCAGTGTCTCATCAATCAATTTGTGTCCTTGTTAGCAATGCCAACTAGATCCAATTTGAGGCACGGAAAAGAAGGGACCGAGAAGAAAAAAGATCGGTTTTTAGAGCAAGCTATTGAGGCATTCCGTTCTATTATGGCGACGACTTTGATTAGGCTCAAGTACCCACGTTGAGTGAAACAAAACATATGCAGTATGTATTTCACCCATGCCGATTAACTAGGGTCTAAAAGAGGCAACTGCTCCATTGTCATGTAAATGTGTATTTTTTGCAGGATTAAGCGATTTCATAAATTACATATTGTCGAGAATAAA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTTATGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //