Array 1 81996-83545 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAGUR010000005.1 Klebsiella pneumoniae strain 5012STDY7312733, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 81996 29 100.0 32 ............................. GCCTCCGCCGGCAAAAAAATCCGCAGGCCGTC 82057 29 96.6 32 ............................A TAAGCAGCTCAACGCCTCTCTGGCATAAAATC 82118 29 100.0 32 ............................. CGATTACTGAGTCGTTCACGAACCGGCCACCG 82179 29 96.6 32 ..........................T.. TTTCTGTTTTGCGCCCTGAGATAATCACTGGG 82240 29 100.0 32 ............................. CAAAAATGCCAGGCACTGACTAAACCGTCGTC 82301 29 100.0 32 ............................. TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA 82362 29 93.1 32 ............CA............... CAGCGTCTGAACGGACGAAACATCCCTGTTGA 82423 28 93.1 32 .....-.......A............... TGTGTGTTGGCGTTCGTTAAAGATTGTTAGTA 82483 29 93.1 32 ............CA............... GCAGCGGCCTGACGATGATTGACATGAACGGC 82544 29 100.0 32 ............................. TTACTTTTTGGCAGTTGGTAAAACACTTTTGC 82605 29 96.6 32 ...............C............. TTACTTTTAAAAAAAATCAGCTGAAACAGCCG 82666 28 89.7 32 .....-......AC............... TTCGAGCACGGCCATGTGGAACTGTTCAGTGT 82726 28 89.7 32 .....-......CA............... TTACGCATTGTGATCGGGATTCGCTTCAGACG 82786 29 89.7 32 ............C..A............T TCGATGGCAACCACCAGGAACAATAAAACCCC 82847 29 89.7 32 .A..........CT............... CATCGTGCCCGAGTTTATATGTTGCGCACAGG 82908 28 86.2 32 .....-....T.CA............... CGAGCGCTCTCCTGGTAAATCGGTAGCTCGGA 82968 29 86.2 32 .....T......CA..............A TAGCGGCGGTGAAACGCTGGATTGCGGACAAG 83029 28 86.2 34 .....-......C..A........T.... ATGGCGTTGAGCGGCAGTTTAATATTATCTGGCT 83091 29 93.1 31 ............CT............... CTCTGAGGATGATATGCACCGGCACAGGTGC A [83118] 83152 29 89.7 32 T...........CA............... TTCTTTGTTCGTATCTACATCCAGTGCTGAAC 83213 28 93.1 31 .............A...-........... TTACTTTTAGTAATGCATTTTTTTGTTTTTT A [83224] 83273 29 96.6 32 .............A............... AATGGTGACAGGCAGTGCACCGGCCTGGAGGA 83334 29 93.1 32 .....A.......C............... GCTCTGAGGATGATATGCACCGGCACAGGTGC 83395 29 93.1 32 ............CT............... GTTCCCTGCACTAAGACGCTGGTGGTCGCCAA G [83412] 83457 29 93.1 32 ............CA............... TTACTTTTAAAATAAATGTCTATATTGGCTCA 83518 28 82.8 0 ............CAC.......-.....A | ========== ====== ====== ====== ============================= ================================== ================== 26 29 93.1 32 GTATTCCCCCCGTGTGCGGGGGTTATCGG # Left flank : GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCTGCTAACTCCAAAAGCTGGTGGATTTTAGTAGTGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA # Right flank : ACATAAAAAGCGCAATGGTGGGGCTTTTGTCATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCTTCTGGAGAAGCGCCCACATTCCGCCATGTCTTGCAGGTTGCAATCAGAAAAGGCCTTACGACGGTAAATTCATGCCTTGGGCAGGTAAGAAAGTATGACGTTATAACTCTACATTTCTGGTTGATTAAGGCAGGGTGGCTTTCCTGCTTTAAAAACAATCACTAATTTTGAACGGTAGTCGTCTTGATCCCAACTGCTACCTGATGGACTAGGCACCTGCAAAGATCCAATTTATACTGTTTATATATACAGTGTTTTTAGGTGGTCGGAGGTTGTGTCTATGTTCTTAATTCCAATGGAAAATCCTGAGAAAATTGCCATCCCTTTATTTCTCGAGCGGTGTGCAGCTGGCTTCCCCAGCCCTGCCCAGGATTATACTTCCAGTGAGCTAGACCTGAATGATTATTGCATCAGGC # Questionable array : NO Score: 5.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.26, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCCCGTGTGCGGGGGTTATCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [8-30] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //