Array 1 574445-570016 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB898647.1 Halomonas zhanjiangensis DSM 21076 D467DRAFT_scaffold00002.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 574444 33 100.0 35 ................................. TTTAGTACCAGCAGGCATTGGCAACGTTACTACCA 574376 33 100.0 36 ................................. ACCGGCACGATAGCGCTGATTAATCTGCTCAAGCGC 574307 33 100.0 36 ................................. CACACGCCGCCGGTGTGACCTACAAACGACTCACGT 574238 33 100.0 35 ................................. CATGTCCGCGTTGGCGTGACGATCAAATCACCCTG 574170 33 100.0 34 ................................. TTAGACAAAACAACAACCTCCCCCTGGAAAATTC 574103 33 100.0 33 ................................. CATTACCGGCCCGGGCGGCTGGAATATGCCCGC 574037 33 100.0 34 ................................. ATGAATGCCTCGCTGGAACCCCTGGCCTCGTTGC 573970 33 100.0 36 ................................. AACCGGTGTCCCGGTAGGTTTCATCGAGAAACTCAC 573901 33 100.0 33 ................................. GTAGGCTACAGAAAGTCTCCCGCACATTTCGCC 573835 33 100.0 35 ................................. TGAATCCTACGATCAGCTTCACAGATGACGCTATC 573767 33 100.0 36 ................................. AAGCAGCATGCCGCCCGAGGTAACAGAGCGAACCCG 573698 33 100.0 36 ................................. GCTGCCGTCCTGGTAATGGGCCAGCTATCGAAGGGC 573629 33 100.0 34 ................................. AATACCAAGCTCCGTACCCCGATAGGCCTGCGCG 573562 33 100.0 35 ................................. CTGTTTATCGATACCACCTCGCCGGGTGATGTAAG 573494 33 100.0 34 ................................. AGTGTCGTCATGGAGCGGATCGTCTACGAGCTGC 573427 33 100.0 34 ................................. GGTGCGTTGTACCAGTTGAGCGTTGCCGGGTGGC 573360 33 100.0 35 ................................. GATGCGCTCAACCACGCCGTAGCTGACGCCAGTAC 573292 33 100.0 36 ................................. AGTGATGAGCCATCGATATTAATCGCGAACACTAGG 573223 33 100.0 35 ................................. TTGATCTGCGACGCATTCACCCGCGTCACGATATG 573155 33 100.0 35 ................................. TCAACGTGGCGCATGACGCCAGCCCGGGCAATGCC 573087 33 100.0 35 ................................. TTGCCGAAGGCGCGGAAGACGACTCGATCTACGGC 573019 33 100.0 36 ................................. TGTATGTACAGTCGCGAATGAGGGCGGTACATGTCG 572950 33 100.0 35 ................................. AAGAACATGGGTGCGACGCAGACTGACAACAACGG 572882 33 100.0 35 ................................. TCGCGCATTACCTGCGCCGTCACCTTTAGGCTCAT 572814 33 100.0 38 ................................. CTTGCTGATAATGCTTGCAGCAAGCCATACAGACGGAC 572743 33 100.0 33 ................................. ACTGGCGCGACGATCCGCGCAAAGATGAAGCGT 572677 33 100.0 33 ................................. ACCATCACGTAGCCAGCTGCGGCATACCAACCG 572611 33 100.0 35 ................................. CCTCCCAAGCGTTTTGACCATCTACTGAGGTTGGT 572543 33 100.0 33 ................................. CACCTCGATACCGATAGCGCCCACGTCCTTAGC 572477 33 100.0 36 ................................. TATCACTCGTGCCGACATGGTTGACCAAACAAGCCG 572408 33 100.0 36 ................................. AAAGGCTTCAAGAACAAATGGGAACCTGTGGGCGAG 572339 33 100.0 34 ................................. TTTTACGCCGTGGCCCAGATTGCAGACTGGCCCA 572272 33 100.0 35 ................................. AAAAAGCGACTTGGGCGAGCCAATCTTGTCGACGT 572204 33 100.0 33 ................................. TTTCCTAATGGGCTAGGCTACATAGTCGATGGC 572138 33 100.0 36 ................................. TACCCGTTGGAGCGTTTGATGGGAGCAGATTGTTAA 572069 33 100.0 34 ................................. ACGTTGCAAGAGCAGCCGTACACCAGCTATCAAG 572002 33 100.0 33 ................................. TGCGGTTATTGACCCGATCATCCATCCACACAA 571936 33 100.0 35 ................................. TCTACCGCCAAAACACCTTCGGCATTACTTTCTTC 571868 33 100.0 34 ................................. CAACATTTTAACGCCCCCCTCCCCCTCCCCATAG 571801 33 100.0 33 ................................. TTTGGCATGCGAGTAACCCGGCGCGCCGATGAT 571735 33 100.0 35 ................................. AAAGATCAAAGTGCAGCGTTATATTGGTGTGGATC 571667 33 100.0 34 ................................. AGCTGGCACTAGGCAAAACCAGCGAAGCCGCGGC 571600 33 100.0 35 ................................. TCCTGGATCGGCTGAAACCACTGACGGCACGCTTT 571532 33 100.0 33 ................................. AATCACAACAAGCCCGGCCAGAATGTCGAGCAG 571466 33 100.0 36 ................................. AGTTTCGGTGGCGATTCTACGGACACGCCAAACGTA 571397 33 100.0 34 ................................. ATTTGAAGTCCAAAATACAAATGGCTGCTGACAT 571330 33 100.0 35 ................................. CTCGGTGATGCGCTCGCCAATAAGCTGGTTCATAT 571262 33 100.0 34 ................................. ACCAATCATGCGTATGTCATGGCCCGATGCAAGA 571195 33 100.0 34 ................................. ATCAATACCCCACTCGGCAGCACCCGCCACGAAC 571128 33 100.0 34 ................................. AGGAGATGATAGCAACGTCAAACCCAACGGATCA 571061 33 100.0 34 ................................. ATAAAGATCCTCACCACCGACGTTATAGCGGGTA 570994 33 100.0 35 ................................. TGTGCATGATGGTCAACAGCGGCAAGACGTCCTGC 570926 33 100.0 34 ................................. TCCTCATCGGCTAATGCTGCGGCTGCTCGAGTAA 570859 33 100.0 36 ................................. GTCGTCTGAATCTTGAGGACACAAGCACCCAGGCTC 570790 33 100.0 35 ................................. AAAGCGCCACCACTCAGCAAGATTGGCTAGCGAAC 570722 33 100.0 34 ................................. TGACTACAAACTAGGCGAGCAGCAAGACGCCCTG 570655 33 100.0 34 ................................. CCTACGACGTGCCCGGCGCTTATACCGTGCGCTT 570588 33 100.0 33 ................................. CTATAACGAGTTGAAGAGCCAATGCAGTGAAAA 570522 33 100.0 35 ................................. CTTGATTAGTTGCTGGCCTGAGCCATTTCGGCTAG 570454 33 100.0 35 ................................. ATTCATGTAATAGCCAGCCACACCACGAAACTCAG 570386 33 97.0 33 .............A................... TGCGGCGAGTACATATGCTCTGATGTTGTACGT 570320 33 100.0 36 ................................. TCAACAGTGCCCAGATCGCTCAGCATGCGCGCCCAG 570251 33 97.0 36 .............T................... AAAGCGGACGAGCGTAAAGACCGTGTGCTGGCCGAC 570182 33 100.0 34 ................................. AGTATCGCGAACTGATCCGCGATGCCGATGGTCT 570115 32 87.9 35 ............-.A...T...T.......... CAAACCATGGCGCTCATGGTGGATGGGGTTGAAAC 570048 32 81.8 0 ...A......CA.-...........G......A | G [570019] ========== ====== ====== ====== ================================= ====================================== ================== 66 33 99.5 35 GTCGCGCCCCGCTCGGGGCGTGCGGATAGAAAC # Left flank : TAGCACGCTGAGGACAATGTCATGATGGTACTGGTCAGTTACGATGTCAGCACCTCTTCAGAAGGCGGTAACGGTAGATTGAGGCGAGTGGCAAAAGCGTGTCGTGATGTAGGGCAGCGAGTACAATTTTCCGTATTTGAAATCGAAGTTGATCCCGATCAATGGGTACGCTTTCGTCAACGTCTAATCGACTTGATTGATGACGACGTAGATAGCTTACGTTTTTACTTCCTGGGCCGAAACTGGAAAAACCGTATCGAACATATAGGCGCCAAGCCCGCCTTGGATATGAATGGTCCTTTAGTTTTTTGATATTTCTCTCACTTGCGAACCGCAAGTGTCTTGTAAAACCCCGCCAAGTTCGCAGCTCTTTAATAAATTGTTTTTACTAGCAAATTCTTTTGCTTACTTCTTCGTACCAAGAAAAAGCGGCTGGTACACGGTGTTTCGCAGCAACTCACTTTTTTGCTTTTATTTTTCATGATGTTATAAACACTACA # Right flank : ACCATTCGCAGGCTAAAGCCAGCTCCCACAATCCAAATTGCGCAACGAACGTGCATGAAGGAGAAATCCAATATCAATTACCAGTGAGCATCCTTGGTTACGACATCCCCGCCCCTCGCTCGAAAAGTGATAAAGTGCGCGCCGAATCGTAATCCAGCGTTTCTTTTTCGATCAACTTTAAAGCACAACATGGAGGATATGCCCGTGAGCACATCACAAGGCGCATTCGGATGGTGGCGAGGCATTGCCCTATGGAAAAAAATTCTCGCAGGTCTAGCACTAGGCATATTGGCTGGCGCGTTACTGGGTGAAAGTGCCAGTGTATTCAAGCCGCTGGGCGATATTTTCATCAATGCGATAATGATGTTGATCGTGCCTCTGGTGTTTTCCACACTGATCGTGGGCATTACCTCAATGCGCGATCCGCAGAAAATGGGCCGCATCGGTGCGCGGACTATTGGGCTTTATCTGCTCACTACGGCATTTGCGATCAGCATTGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCGCTCGGGGCGTGCGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGCTCGGGGCGTGCGGATAGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.30,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //