Array 1 31-856 **** Predicted by CRISPRDetect 2.4 *** >NZ_SBAO01000013.1 Fusobacterium necrophorum strain KG34 NODE_13_length_47356_cov_37.882487, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 31 30 100.0 37 .............................. TTTTTCAGAAATTGATGTCGGCACATCTTACTTGATA 98 30 100.0 37 .............................. ACAAATAATCTCCATTATTTAATTCAATATCAAATTC 165 30 100.0 36 .............................. TCTATTTCTAAGATTTTTCCTATCTTGCGTATCCTA 231 30 100.0 37 .............................. CATTTCCGCCATTATCTACTGCTTCTTCGCTGTTTGC 298 30 100.0 35 .............................. GATTATCTGGAGTGGATGGAATTGAATCTAAAAAA 363 30 100.0 36 .............................. ACCAAAACAACCAATAATTTTTTCATTTCACATTCC 429 30 100.0 36 .............................. TCTTTATCAGGTGTAAATTTTAATTCAAATTCAAGT 495 30 100.0 35 .............................. TCAAATGTTAAATGGCTGCCATCAAATTCTCGCAA 560 30 100.0 36 .............................. AGAGAAATGATAGAAGCTTTGAAAGATGATATCGAA 626 30 100.0 37 .............................. GAGTGAGTAACAAATAAAATTTCCCAATTTTCCGGAA 693 30 100.0 37 .............................. TTTTCTCTCATTTGTGTAACCTTCCAAAATCATCATT 760 30 100.0 37 .............................. ATAGCACAGACATCTAGTACAGACAGCATAAGCCCGC 827 30 96.7 0 ...................A.......... | ========== ====== ====== ====== ============================== ===================================== ================== 13 30 99.7 36 CTCATAATCGAAGCAGACTGAAATTTAAAT # Left flank : GCGTATAATAAGATATATAACGACTGGTTTC # Right flank : TTATTCAGCATAAGTCCTAGCTTATCGTCTTGAATCATTCATATTAGTGCTACTTTCATTTCTTTCTCCAAGAGTGAGAACTTTTTTCTGTATTTGTTTTCTAAAGTTTTTTAATATAATTTTTTATTGTTCTCGCTTAATGATAAGAAATACTATTGACATTAAAATACTTAAAATATTGAGATTTTTATAAAAAAATGCTAGGATAGAAAGGAGAAATATAATAATAATTTTAAAATTTAATTTAGTTTGGAATATGATAGATGTGAAATATTAAAAAATGATTGGTTTATAAGAAGTATGTATTTAAAATTCATGAGATGGAGGTAAATTTGGACAAAAATGAATGTAAAAAAGAAATTGTATTAGCTATTTGTTATGATTTTGACAAGACACTATCACCGGATGATATGCAAGCTCAAGGATTTATACAGTCATTAGGTAGGGAAGTGGAAGAATTTTGGAATGATTCTAATAAATTAGCAAATGACAATGAAATG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCATAATCGAAGCAGACTGAAATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 141948-142176 **** Predicted by CRISPRDetect 2.4 *** >NZ_SBAO01000004.1 Fusobacterium necrophorum strain KG34 NODE_4_length_142176_cov_33.839288, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 141948 30 100.0 36 .............................. ATGGGATTAGCGGATTATTTGGGCTGCCCGGTTGGC 142014 30 100.0 36 .............................. TTTCGGGCGTATAATAAGATATATAACGACTGGTTT 142080 30 100.0 37 .............................. TTTTTCAGAAATTGATGTCGGCACATCTTACTTGATA 142147 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 100.0 37 CTCATAATCGAAGCAGACTGAAATTTAAAT # Left flank : AGCGTGAAGAGTTGATGAAATATACTTTGACTGTAGAGTCTTACCTTCTTAAAGGAGCGAAAATAGAGAAAAAGATAGCAATAAATTCTTATCAAGAGATAAAGGTAGTCTCTTGTGAGTATGATTTTTTGGTAGGATTAGGGAAAATAAATAAGGCAAAAGAGAAGGAATAGGATAGAAAGGAGTTTCATTTGTAATAGGATTTGTATGAACCTGGAAATGTTTTAAGTTGTTACCAAAAGAAAAACATTAAAAACATTTTTAAGGGTTAAGGATAAAAAAGTATATTGAAATGAAATAATATGAGAGTATTTTTTTTGCTTGTCGACCCTCAATAATGTAAATTTCCTAAGAGGTCGACAAACTATTTCTAGTAAGCGACTAAAGATGATTTTTGACATTTTTTGTTTGTTGAAATCAATAAAAAATGATACAATTACAAAAGGTCGACAAATTTGATGGTAAAAATTATTTAAAATAAAGAACTTTATCTTATGCGG # Right flank : | # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCATAATCGAAGCAGACTGAAATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 167488-167828 **** Predicted by CRISPRDetect 2.4 *** >NZ_SBAO01000001.1 Fusobacterium necrophorum strain KG34 NODE_1_length_257800_cov_39.355742, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ======================================= ================== 167488 26 81.5 39 .....-...T...........TA.A.. AATTTTATATCACTCTCCATTATTTTTACGTATTTGCAA A [167490] 167554 27 100.0 38 ........................... AATAGATTCGCAAGAAACAGATATGACCACGCTATTTA 167619 27 100.0 37 ........................... AATGAAATAATTTCTATTCCTTGTACCACAGGAATAG 167683 27 100.0 39 ........................... AATGAAAAACTTTCTTAGCGAACTGTATATGCAATTACT 167749 27 96.3 26 .....................T..... CAAAGAAAATAAAAAATAAATATAAA Deletion [167802] 167802 26 77.8 0 .......T.T...TC..-A........ | A [167825] ========== ====== ====== ====== =========================== ======================================= ================== 6 27 92.6 36 ATTTCAAAACATCCTATGTTTCTTGTT # Left flank : ACAGTTGTTTAAGAATGACAATGAGGACAAGCGCAGGTATCTTTGGTTAAAGTAGCATGTAATACTTTAGAGTAGATTTGTTTTTTTTGAACTCTTTGAATGTCATCCTCTAAAAAATATAAATTAGGGTCTTGTAAATCGAAAAGAACTTTGATAAAATCTGAATGAGACAATGAAATCACTCCTTTTAAATTGGGTTTCGCGATTACATTTTAACAGGAAAATTTCATTGTCTCCACTTTTTTTTGTAAAAAAAAATGGTATTGAGGAAACATTTCTCATCAACACCATTTATTATACAACCTTTTTATTTCATTTTTTGAATATCCTATCCTCATAGTAAAAAAGCAATACTATTTTTTCCTTGTATTGAAGGTTTCACTTTGTACATCTCTTTTCTCTTTTTTCTATAAAAATAGCCTCCTGATATATTATATCTCTGAAAAAATTTCAACACAGTTTATGTTTAATATACTTTACCTAAAAACAAGGGTCCATTG # Right flank : TCTACTAAATCAGTTTAGCCCATTTTACAAAAATTTGCAACCATTATGTAAAAATATTATTGAAATTCATCCATCTATTATCTAACATTTGACAAATACCATAAATTATCTTAGTATTATTTATATATAAAAGATAGAAAGGAGCCATTATGAAAACTCTTGTTGTATATTCAAGCTTAACAGGAAACACTAAAAAAGCTACTACTTGGGCATTTGAAGCAGTCATTGGAGAAAAAAAATTGCTTTCTGTAGACGAAGCAATGAACATTGATCTTTCCCCTTATACCAAAATTGTACATGGTTTTTGGGTTGATAAAGGAAGTTTGGATTCCAAATCTCGAAAATTTTTAAAAAGAGTAAAGGGAAAAGAAATTATTTTTATTGGAACTTTAGGGGCTTATCCCGATTCCGATCATGCAAAAAAAGTCACGGAACGTTCTCGAAAAATAGCAGAAGAGGAAAATCATTACTTGGGGACTTGTATGGTACAAGGAAAAATG # Questionable array : NO Score: 2.84 # Score Detail : 1:0, 2:0, 3:0, 4:0.63, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCAAAACATCCTATGTTTCTTGTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.50,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [6-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //