Array 1 79821-82354 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS999543.1 Gleimia coleocanis DSM 15436 SCAFFOLD5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 79821 36 100.0 28 .................................... GTGGCTTTCCACGAGTTCTTCCAAGCAT 79885 36 100.0 28 .................................... GTCGATAAAAACGGGCAAACAAAACCCA 79949 36 100.0 28 .................................... ACCGCTATCAATTAACTTTTCACGCATA 80013 36 100.0 28 .................................... TAGACCGCTGTCTAGGCTTCGTGCGGCT 80077 36 100.0 28 .................................... GCATTCTGGCTAATCACCCACCGCGACA 80141 36 100.0 28 .................................... CGACAATCAATGTTAATAACCCTTTCAC 80205 36 100.0 29 .................................... GTAACTTGCTGGGCGTCCACGTAGACTTG 80270 36 100.0 28 .................................... TTGCGCATGCTTTGTCGTCGCCACCGTG 80334 36 100.0 28 .................................... AAAACATACAGATACGTCCCAGCAGTCT 80398 36 100.0 28 .................................... GGCTTGTAGTCCGCGTATTTCCGGCAGT 80462 36 100.0 28 .................................... GTCATTTCAAGGTTATTTTTTCAAATTC 80526 36 100.0 28 .................................... CTCTGGGCTAACTCCTTCTTTATGTCTA 80590 36 100.0 28 .................................... ACGTTTCAACCATTCCCCGCTACCTGGA 80654 36 100.0 28 .................................... ATCACCCCGGTGAGTGTTGACCGTAGCG 80718 36 100.0 28 .................................... GGCGTCGCTGGTTATGCCTCGGGGGATT 80782 36 100.0 28 .................................... AACGTGAAATCGACGGTTTCACCCGCGT 80846 36 100.0 28 .................................... TACGGCGAATACGAATCCATACCCCACG 80910 36 100.0 28 .................................... TCCACTGCGGTTGTTACCAGCGCGAGCA 80974 36 100.0 28 .................................... TTCTATGCCGTTGGGTGAGTTGCGTCGC 81038 36 100.0 28 .................................... GATGGCGACGCCGTATTTTTCGATTGGG 81102 36 100.0 28 .................................... CGTTGTCCGATTTGCTGGTGTGCTTTCC 81166 36 100.0 28 .................................... GCGTCCAAGCCAACCCGGCACCCGCCAG 81230 36 100.0 28 .................................... TTGGGCAACAGTGACTTTGAAAGTGTTG 81294 36 100.0 28 .................................... GCAGCGACCATTGGGTCACGGGCGATAC 81358 36 100.0 28 .................................... GCGGAGCAGGCTTTCAATGAAGTTGATT 81422 36 100.0 28 .................................... GAAGCGCGCGTTAAGTGATTATGCTTTT 81486 36 100.0 28 .................................... GCTCACCACGTAAAAGAGAGCTGATAGC 81550 36 100.0 28 .................................... GAGCTGGGTGGAAGGCGATAGCCTTTTC 81614 36 100.0 29 .................................... CACGCTGGCAAATATCCATGGGTGTTAAA 81679 36 100.0 28 .................................... GGGTTAATCGTTAGGGAATCTGTAAACC 81743 36 100.0 28 .................................... GCAGTGGGAAGCGTATTATGATTCGATT 81807 36 100.0 28 .................................... GCGTTGGAGACCATTCAAGAAAGCGTCC 81871 36 97.2 28 ...................................A AATCATATTCAAGTTCGATTCTGCGTTT 81935 36 100.0 28 .................................... AGCCTGGTAGCCCGTCGCCGGTAAGCCC 81999 36 100.0 28 .................................... CAAGCCCGCGCAAAAAGGCATGGAGGAA 82063 36 100.0 28 .................................... CGTAGCAGCTTAAGGTTGAGGGGAGCCA 82127 36 100.0 28 .................................... TCTACGCGGCGGGCTTGCCATAGCTCGC 82191 36 97.2 28 .....G.............................. ATACCGACCACCAGTCACCCAACCTTCC 82255 36 97.2 28 ........................T........... TTAGCAGCCCGTAAGGCAACTGAGCTAC 82319 36 83.3 0 ..................A..T....A.AA....A. | ========== ====== ====== ====== ==================================== ============================= ================== 40 36 99.4 28 CAAGTATATCAGAGGGAATTAAGACTGATTCCCAGC # Left flank : TTGCTTGTGGAAAGTTTTCTGTAGATGGTTTGACTATTCCAGCGGTTTTTGAAGATTTTGCGCAGCAGTTTGGTCTTTATATTGAGGATGATGTTGAAAAGTTAGTTCCACCTGTTTGGAGTTTCAGAAATGGCAGATGATCCTATGTGGCTAGTTGTAATGTTTGATTTACCTGTGGTTACTAAAGCTCAAAGAAGAGCTGCGACGCAGTATCGGAATAGGCTACTTGATTGTGGTTTTTCGATGGTGCAGTTTAGTGTTTATGCGCGGTATCGACCAACTGGTGGTACTGATGTGCCAGTTATGAATGCTGTTACACGTGGCATTCCGGCGGGTGGTAAAGTTCGTGTGATGACTGTCACTGACAAACAGTGGTCGTCAATGATGCGTTTTTCTAATAATAAGGAAGAAACTGAGCCTGAAACGCCAGAACAACTAACAATTTTTTAATCGTTAAAATCTGACTTTTCCTTGAAAAACTGGGATATTCCCTCTGATAT # Right flank : CGGGCTTTGAACCGTTGGGTGCTGTATCTTAGGGCAGTAGAAAATCAGGGCAATGGCCAATCGGCAGGTTGTCTGTAGTAAGAGTGAAAAGTTAAATCCACACTGTTTAGGGATTTAAGATAGCAGTTAATACCAGCACGTACACTAAACGCGACCTCAGAAAGGATAGAGGTCGCGTTTAGTGCGTTTAAACCGGTTAAAGGTTGCGTTTAGTGCGGTGAGTTAGGTGCAACGCCCTCGGAAATGAAGAAACGGCGCGAAACGAAAGCTAAACCCGCAACCACAATCGCACCCGTAAAAGAAAGCATAAAGAATAAGCCAGCCACGTCCTTAAAATAGTTAAAAAGTAATGCAACTAAACCAAACACCAGGCTCATAACCCCATGCAAAACCGCGAAAAACGCTGTCAAACCAACGAAAATCTGCAGTTGCGGCGCAATCGGAGCCACCTGCTGTGGAACCAGCCCCCGGCACAAGAACCGAAACGGCGTCGCAGCAAA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGTATATCAGAGGGAATTAAGACTGATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.60,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //