Array 1 410588-406707 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMOC01000001.1 Halobellus salinus strain JCM 14359 sequence01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================ ================== 410587 30 100.0 35 .............................. AGCGCCAGCCACACGGCGAGCGTCGTCTTGCCCGT 410522 30 100.0 35 .............................. GACGACATCAAGCGGCGTTCCGCCGAGTGTGCCGC 410457 30 100.0 36 .............................. GGCGACGGTCCGAAGCCCAAAACAGTCGAACGGGTC 410391 30 100.0 34 .............................. TGCTCGGTTTCGGTCTGTGTCTGTGTCTGCGCGC 410327 30 100.0 35 .............................. GAGCGCGGGGCGGCCGGCACGCTCGCCCGCGTCGA 410262 30 100.0 48 .............................. TCGCTCGATGATATGGGCGAGTACGCCGACGACGCCGTCGTCGATCTC 410184 30 100.0 35 .............................. GGGCTCGGCGCCAACCTCGCCGAGAAAAAGGCCCG 410119 30 100.0 34 .............................. CGAAGGTTTAGATATCGCTTACCCGCCGTCTCTG 410055 30 100.0 35 .............................. CAAATCAGCCCGCCCGACGAACCCGAACAACTCGT 409990 30 100.0 34 .............................. TGGGTTGACAGTGCTGTCAATAATAATCGACACT 409926 30 100.0 36 .............................. GGACGAACACGGGTGGCACGTCAAGCTCGAGCGCGG 409860 30 100.0 35 .............................. TGGAGCCGGAGGTCGTAGGTGCCGGGCTCAAGCGT 409795 30 100.0 36 .............................. GACCCCACGACAACCGACACACCGACGCGGGACCCG 409729 30 100.0 35 .............................. GACCGCGACGGCGAGAGCCTGGCCGACGAGGTCGG 409664 30 100.0 34 .............................. GTCCCAAAGACATACTCTAATCCGGTCGCTTCCC 409600 30 100.0 36 .............................. CGAATTGCGCGGCTGGGGCTGGGAAGACGGAACGGA 409534 30 100.0 37 .............................. AGGTGCTCCATGTAGCTTTCGTACGGCTCCCCACAGT 409467 30 100.0 35 .............................. GTCGAGTACGAACACGAGTACCGAAACGAGCCCAA 409402 30 100.0 35 .............................. CCCGCTGGCGAACCTCAGTACAGTATGCCGCGAGG 409337 30 100.0 35 .............................. GTGTTATTAGCGTCTCGGAGCCCCCACTCAAGTTC 409272 30 100.0 36 .............................. CGCTAGTTGTTCAGCCGCTTCGTTCACCCGGTCGTG 409206 30 100.0 34 .............................. CGGAGACGGAACCCCCACCCCTGAAGCCGGGAAG 409142 30 100.0 36 .............................. GGCTATGTGTTCGCGTTGGTCGTCGTTCATTGTGGT 409076 30 100.0 37 .............................. TGCTCGCGGTGTGGGTGTGGGTCATCGCCGGCGCCGT 409009 30 100.0 32 .............................. GGAGGCCGGTCGACTGGTCCAGGTCGATCCGG 408947 30 100.0 36 .............................. CAAACAGAATGTGGATCAGATCTATGAAGCGTTCGA 408881 30 100.0 35 .............................. CTGCGTGGTGAGTACATCATCCCCGTACTCTGCCG 408816 30 100.0 35 .............................. AAGTCTCGAATGTCAATCCCGTTCGTGTAAATGAG 408751 30 100.0 33 .............................. GAGCGGGACGTTGTCGACCTCGACCGGCAGCGG 408688 30 100.0 36 .............................. GATCCGCCGAAGCCGCGGGATCACGCCGTCGCCCTC 408622 30 100.0 35 .............................. GACCCGAGCCGGGAGTTTGGCGACGATGTCGGCGG 408557 30 100.0 37 .............................. TACCACGAACGTCTTAGACGTTCCCGGCCATTATCCG 408490 30 100.0 36 .............................. CGGGTACAACTCCGACGGCCTCGGCGGCTGGGAGGG 408424 30 100.0 36 .............................. TTCTGGACGATGCCCGAGAGGGCCTCCATACCGCCG 408358 30 100.0 36 .............................. GCGGGCGTCACTTGCACTTGTGGTAACACCGCACGC 408292 30 100.0 37 .............................. GATTGGTTTGCATAGTTGTGGTTTGGCTGGTATTGGT 408225 30 100.0 35 .............................. AGTCTATGAATCACGACACCGACGGTAAAATAACG 408160 30 100.0 36 .............................. AACCCCAGGGTTCGCGCCGTCGAAACCAGTCTCCAG 408094 30 100.0 36 .............................. TCCCGCCGCCATTGCTCCACCTCCTCTAAGAGGTCG 408028 30 100.0 35 .............................. GTAGAGGTTCAGCAGCGCGTCGAGCGCCGTCGCGG 407963 30 100.0 36 .............................. TCCCGCCGGCTGTCACCGACGACGACAGCGGCGAGG 407897 30 100.0 34 .............................. TGCTATCTGTAATTGGATCGGGTGTCCACGGCCG 407833 30 100.0 35 .............................. CAACTGCAGGACGAAACGGGCCGCTTCGGCGCCGA 407768 30 100.0 35 .............................. TGGGAGGGCCGCGCGACCCAGGCGTTCGTCGATGT 407703 30 100.0 37 .............................. AGCGTCCCGGTCGCGGCTCCCGCTACGATAGACAGTT 407636 30 100.0 35 .............................. TACTGGCTCCGACTTAGCGTGTGGCCCCTACTAAG 407571 30 100.0 35 .............................. AACCCATTCGTCACCTGGAACGGTCGTATTAGCCA 407506 30 100.0 34 .............................. TGATTTACTTCAACGCGGCGGCAGTCTTGCTCGA 407442 30 100.0 34 .............................. CGAGAGACTGCCCAGGAGGAGGTGATCGGGCCCG 407378 30 100.0 34 .............................. GGACCTGGACGCAACACGGCCGCCTCCACCGCGA 407314 30 100.0 34 .............................. ACGCCGACGCAGTCCGAGCGAGTGACGCTGACGG 407250 30 100.0 35 .............................. GTACCCACCCGTGGTGAGTGGGTGCCACACAATGC 407185 30 100.0 35 .............................. CGGAGCGGCACATGAGGGCGCCAACTCCCACCCCT 407120 30 96.7 34 .............................T TGAAGTGCTACGTTCCGAGGAGGAAATCACACAG 407056 30 96.7 36 .............................T GAGCTGCCGCCGGGGACCCGCCAGATCCGGTTTGAG 406990 30 96.7 34 .............................T GGCCGTGCGTGGCAGTTGCTTCGGACGCGGCGTG 406926 30 96.7 32 .............................T ACACAACCCGTCTATGGAACCCCGAGGACACC 406864 30 96.7 36 .............................T GGGATCATCGACGACGATCTTCGGCTGCCTGTCGTC 406798 30 96.7 32 .............................T TGATACGACTTGGACCACCGGCTTCGGGCCAC 406736 30 96.7 0 ...........G.................. | ========== ====== ====== ====== ============================== ================================================ ================== 60 30 99.6 35 GTTTCAGATGGACCCTTGTGGGGTCGAAGC # Left flank : ATTGACCACCCGGATTTGGGTAAGAAGGTGAGCTACCAGTATCTCCTCCGTGTCGAAGCGTACAAATTAAAAAAGCACCTCCTAACTGGCGAGGAGTATGTTCCGTTCCGACGGTGGTGGTAAGTATGGTCTATGTTATCGTGGTCTATGATATGGAGGCAGATCGAACGCACAAGATGCTGAAATTCCTCCGCCGATACCTCACACACGCACAGAACTCCGTGCTCGAAGGGGACGTGACCGAGGGTGACCTCGAAAAGATCCGATCCGGCGTCGATGATCTACTCAATCCCGGAGAATCGACGATTATTTACTGCGTTTCCTCCGAAAAAATGGTCGAGAGATCCGTATTCGGGGAGGACCCCACCGCCGACGATCAATTTCTCTGAGCGGTCCAGCTTTCCATCGACCCTCTAGGGGTTCGTTGACTATTGCGGGTCGACGGAAACGATGAAGTGTGAACAGCCGATAGAGGAGCATATGTGGCCAAATCGGCCATA # Right flank : TCCACGCCTGGGTCTTTGCTGTTCTCCCAGCCGTGTTTCAGATGGACCCCGTCCTCCAAACAACGTCTGGTATTTCATCAGCGGACAAGGCGGATACCCCGAGGCTTGACCTCGGGGAGGAAGCCGACACTACCTTTCGCAGACCACGTTTGGTAGCAAGGCTGACTTCCCCGCTTTAATATGTAGTTTTAATTATCTCTACCTACTCGTATCTCGGCTTTGCACGTTGGGAATCTAACATTTAATCGGGCGAATATGACGGCTGAGGCCGTGCTCTGACGAATATACCGGGTCAAGCCGAGTACTGCGTACACTCCGTGAGTGGAGCTAGTAGCGTGAACGTCGCCTTCACTACTCCAGCAGACCGGAGTTACTGTGCGAGTGATTTCCAATATCGACCAGCAGACCGCTCCTATCAACCGTTCCCGTAGTATAAATGTCAATACGACAACGTGCAAAGCTGAGGTTCAAAGCCGAGTTACCAAATCTCCAGGGATTAC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGATGGACCCTTGTGGGGTCGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.30,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //