Array 1 118667-115789 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQBL01000001.1 Kandleria vitulina DSM 20405 Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 118666 36 100.0 30 .................................... ATTTATTGGTTGTGAACTTAAAGCATCAGG 118600 36 100.0 30 .................................... GTATGTAGTCTTAGATATTCTTTAGAAAGG 118534 36 100.0 30 .................................... ATCGCTAATTATTAAAAGCATGATGGATAT 118468 36 100.0 30 .................................... CACAAACGCCAAAAGTATCTATTGTATCTT 118402 36 100.0 30 .................................... GCAGCGTAAGCTTATTGACTTGCTGCTAGA 118336 36 100.0 30 .................................... ATAGAAGCAGTGAGTTCACCACTTGGTTCA 118270 36 100.0 30 .................................... CAATTCTCATTATACTCATTTTCAAGTGTT 118204 36 100.0 30 .................................... TAAGCCAATGAGGATAATTAGAGATAGAGG 118138 36 100.0 30 .................................... CAAATAATAAAATGAAAGCAAACGAAAAGT 118072 36 100.0 30 .................................... AAAAACACAACGTAACGTTTATATTCGTGT 118006 36 100.0 30 .................................... AATGAGCATGAAGCATTTTCCCCGTATTCC 117940 36 100.0 30 .................................... ACATAGATCATCATTGTCTTACTTTTCTTG 117874 36 100.0 31 .................................... AATAAAATGGATGTTAAATCAAATATTCATA 117807 36 100.0 30 .................................... ATCAGTCAAGTTCTGTGCTTTCAATAATTC 117741 36 100.0 31 .................................... ATGATATTTCATATAGATCATCACGAATTGA 117674 36 100.0 30 .................................... CACTATAACGACATTTTACACCATTATAAT 117608 36 100.0 30 .................................... TTAAATTTGTAGAATTGACTTCCACGAAAG 117542 36 100.0 30 .................................... GTGTCTAGGCTTGAAAAACAGCTGTCTAAC 117476 36 100.0 30 .................................... ACATGAATGAAGAATTTGCTAAGACAGATG 117410 36 100.0 30 .................................... TCGCTTATCTTAACGAACGAAACATGGAGA 117344 36 100.0 30 .................................... AACTTTCAGGAAAACGAAGAAAGCCTTACG 117278 36 100.0 30 .................................... CAAGGCATCTATCAACTTGAACTTGTTTTC 117212 36 100.0 30 .................................... AGCAGATGCGAAAGATCAGCTTATACGAGT 117146 36 100.0 30 .................................... AGGCTCTTAGCGACGGAACGGCTCTCTATG 117080 36 100.0 30 .................................... CTTCAAGCGATGGTAAGAATACCTTATCAT 117014 36 100.0 30 .................................... TTGTTGGGTACTGCATAACCATACTCGCCT 116948 36 100.0 30 .................................... TTATTTTTGAAATAGAGCGATCAAAGAATG 116882 36 100.0 30 .................................... TAAAGGGAAGTGGATGTATTACTGCACGCA 116816 36 100.0 30 .................................... TTCACCGATATCATATTCTGTTGCATATTT 116750 36 100.0 30 .................................... TCCTTGCAGCGAGTTCACCAATACGCATGC 116684 36 100.0 30 .................................... GATATGGTCGCTTTACTACCGTGCTTAATA 116618 36 100.0 31 .................................... CGATGAACTTGTATGCTATCGCAAGATCAAG 116551 36 100.0 30 .................................... TTGAGGGATATACATATAAACTTAAGACAG 116485 36 100.0 30 .................................... TGTTAGAGATAGTGACTACATTTTAGATGA 116419 36 100.0 30 .................................... TTTGGTAATAGCATATATGTATCTCCTTTC 116353 36 100.0 30 .................................... ACACTGTAGCATTTGATACATGGATCATGC 116287 36 100.0 30 .................................... CCAAATGCTACATTTTTAGCATACGTTCTT T [116270] 116220 36 100.0 31 .................................... CCTGGTCTTAAAAAGGTACAGGAATTTGTTA 116153 36 100.0 30 .................................... AAAAGTGCTGTGTAGAGGTTATAGACTGGC 116087 36 100.0 30 .................................... AGTTTTATATGAATTAATTAAAAGCACATA 116021 36 100.0 31 .................................... CTTGCAATGATTGTTGCAGTCATGATTCTGA 115954 36 100.0 30 .................................... TTATTTGTGCATTTGGATAATCATATACTT 115888 36 97.2 30 ................................T... CCAATTAAGTATGTAGCCGGTCACCGGCTA 115822 34 80.6 0 ...................C.A....-...-..CGT | ========== ====== ====== ====== ==================================== =============================== ================== 44 36 99.5 30 GTTTTAGAGTTGTGTTATTTTGAACAGATACAAAAC # Left flank : ACAATGCTTACATCTCTTTATAAATATATTGAGAAGTTAATTCTACATGATGAAGATAAAGATTTTAGTTATAAGAGATATATAGAAAAGATTAATGGATTATTAGTAGATGAACTATATAATTTGAATCTTGATTTTGAATACAATGATGATTTATTAGTTAATCAGTATTTAAAATCCATTAATGTGAAGTTTACTCAGGAGTCTATTTCTTCTACATTTGATTTATTGATGAATTACTTAGAACTTGTTTCTGAATTGAATCAAGGTATAATTATTGTGTTGTGTAATTGCTTTAATTACTTTGATGATCATCAACTTGAAGAGTTATGTAAATACAAGAATTATAAGCATATTAATATATTATTTATCGAGAATTCTTATAGAAATCTCGTAAACACATACTTTAAGACTTTTATCATTGATAATGATTTCAATGAAGATTTTGTTCAAGATGACTAGCAGTCGTTGAGCGAATAGACTCTAAACCCTAATTTGAG # Right flank : ATATATATTTATACAAATTAATATTTTAAAAATTTAAGTTTGATGTTTATGGTCTTATTATGCAATCATGAATGTATTGGTGTATATTAATCTGTTGATGTATTTAATGAAGGGCTATCGTAGCCCTTCATTAAAAAATGATGATTAACACAATAATAATTGATGAACTTGAAATTGATTTTAAAAATTATTAATAGAAAAGAAAATGAGGTATATAATAAATCTAATCATGTGATTAAGGAGTTATTATAATGGACGAACTACAACAAATAGTAAATAAATTTGTAAATGATAGAGACTGGGATCAATTCCATGCACCAGTACATTTAGCTAAAAGTATTGTAATTGAAAGTGCTGAATTATTAGAATGTTTTCAATGGGATAATGATCACTTTGATCACCAACATGTAAAAGAAGAATTAGCTGACGTGATGATTTATTGTTTACAGATGTGTGATAAAATCGGAGTAAGAGCTGATGATATTATCAAGATGAAAATG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTTGTGTTATTTTGAACAGATACAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [88.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //