Array 1 1599937-1599105 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_UGIB01000001.1 Helicobacter fennelliae strain NCTC11613, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	====================================	================================	==================
   1599936	    36	 100.0	    31	....................................	AATACCAGCGTGGCTAAGCTACATTTTAGAA 	
   1599869	    36	 100.0	    32	....................................	AGCAAGCGCAGCTGCCTTTGCGCCTATTTATG	
   1599801	    36	 100.0	    31	....................................	TGCAGTTTCTTCTGCTAAAGCCCATAGTTTT 	
   1599734	    36	 100.0	    30	....................................	AATTAAATCTGGTGCGTCAAAAAACACTAA  	
   1599668	    36	 100.0	    30	....................................	GTAAATTCAACACATAGCTTAATTAAAAGG  	
   1599602	    36	 100.0	    30	....................................	GCAATATCATTCTGTGGCAAGCCGATTATT  	
   1599536	    36	 100.0	    30	....................................	CCCTCCGCTCATTTATTCCCCCTATGATTA  	
   1599470	    36	 100.0	    30	....................................	TCATTAAGTCTTGAATTGCTGAGATTGTAG  	
   1599404	    36	 100.0	    30	....................................	ATACAATAACAAAGGACACCCTGCTCAAAG  	
   1599338	    36	 100.0	    30	....................................	TCATTAAGTCTTGAATTGCTGAGATTGTAG  	
   1599272	    36	 100.0	    30	....................................	AAGCGAGCAATTAGGATTAAGCAAAAAAAA  	
   1599206	    36	 100.0	    30	....................................	AGTCGTGCTATCTATCATATCATCGTGTGA  	
   1599140	    36	 100.0	     0	....................................	|                               	
==========	======	======	======	====================================	================================	==================
        13	    36	 100.0	    30	ATTCTAGCATATAGAAGTTTAAGAAGGGACTAAAAC	                                	       

# Left flank :   CTTTTTTATGATGCAATTTAGCGTGTATATGAAAATATGCAAAGGGTTAAGCTCGGCAAAAAGCTCTCTAAATGCTGTAAAAAAGGTGCTTCCACCTTATGGTAATGTCCGCGCACTTATCATCACAGAAAGACAATTCGACAATATAGAAATATTATTAGGAAACCCATCATTTAATGAAAATGTTAATGAAGATAAAAATCTTGTGCTATTTGACTTTGACGAAAATGCGGGTGATTACCGCTATGGTATGGAGTATCAAAAACAAGAAGAATTGAATACAACTACTACACAACCAAAACAAAAAATCAAAAATAGGCAACCAAGCTTATTTGAATTCTAGGGTTTTGATAGGGATATGATTTACCCTGCGGAAGACCCCTTACTCCCTTATTTTAGTCCCTTCTTAAACTTCTATGTCGCGAATTATAAAGGATTTCAGGTAATTTCTAGCTTAAAATCCTTTGAAATCCCTATCTATAGGCACCAACAGAGAGCCT
# Right flank :  ATGCAAGAAAAAAACATATTAAAAGGCATAGATAATATATAATATTATAGTAAAACATATAATATTATATACTTTGCTATATTTATCTATACTTATATTATATATATCAAATAAATGTTATAATGATAAAAATCTCTTAAATCAAAGGAGTTTCAAATGACAGCCATATCTACACAACACACACAAAGACGCTCATTATTAGGCACTAGAATTGTATTAGATGAAGAAAAGATTCTAAAAGAAAACAAATACGACTTAGATAGAATGTATGAGATTATTGATGAATTGGCTAAAGAATCTGGACTTATAAAGATAGATAAACACACCTATCATTGCAAAGGCAATGATAAAGACTTGGCGTGTTTAGGCATATTTGTATATAACAATCTTATTGATTGCAAATGGTTCACTTTGAATGTTAAAGAATGGGATTGGATAAGTGAAAAAGAGGGGAACGAGACTCTTATTGGCGATGATATGGGCGTTTGGCAATGAAGAAT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATTCTAGCATATAGAAGTTTAAGAAGGGACTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [0.00,-1.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [83.3-61.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,0.37   Confidence: LOW] 

# Array family : NA
//