Array 1 2288548-2287126 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_017473.1 Lacticaseibacillus paracasei, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   2288547	    36	 100.0	    30	....................................	TGTTTTCTCCAGAACAACAGCTTAGACGGC	
   2288481	    36	 100.0	    30	....................................	TGACATTGTGGGTATGCAACAAATCACCCC	
   2288415	    36	 100.0	    30	....................................	GAAACTTGACAAAAACAATCTTATCTACTG	
   2288349	    36	 100.0	    30	....................................	GAATATCATAATGCGGACGACCCATTACCA	
   2288283	    36	 100.0	    30	....................................	AAAAGCCGGTGCAATATGCACCGGCTCACT	
   2288217	    36	 100.0	    30	....................................	GCACTGATGAAACCGCACAACAGTTGACCG	
   2288151	    36	 100.0	    30	....................................	GATCGCGGCACGATTGTAAACGAAGAAACC	
   2288085	    36	 100.0	    30	....................................	CCAAATTGGTTAGCACCGCTTAAAGACGAA	
   2288019	    36	 100.0	    30	....................................	TATCAGAGGCTTATCCATTAAACAACTGGC	
   2287953	    36	 100.0	    30	....................................	AAACTGCCTTCCGTTGCGATCAACTCGCGC	
   2287887	    36	 100.0	    30	....................................	AAGCGTTCGCTTGCGCTGGTGTTGGTCTCG	
   2287821	    36	 100.0	    30	....................................	TCGTAGCGGCTAACACGCTTATGGCTGACA	
   2287755	    36	 100.0	    30	....................................	AAAATATTTCTAGAATTAGCAACTTTATGG	
   2287689	    36	 100.0	    30	....................................	GATCGTTGAAGAAAGGCTGATCAATATGTT	
   2287623	    36	 100.0	    30	....................................	CGCAAAAAATGTTTTGACAAGAACACATCG	
   2287557	    36	 100.0	    30	....................................	GGCCAATATCATCAGTCGGGAGATTGTCGC	
   2287491	    36	 100.0	    30	....................................	ACTCGTCAATATCCTTCTGCATGATCAAGT	
   2287425	    36	 100.0	    30	....................................	GCAATCGCGATACTTTCACCGATTGCAACA	
   2287359	    36	 100.0	    30	....................................	AACAAAATAATAGGAGGTTTTTACCATGGA	
   2287293	    36	 100.0	    30	....................................	ATGACTTTAACAATCAAATCCCAAGTTGTT	
   2287227	    36	 100.0	    30	....................................	TATTATCCTAACACATCCATCGAGAAGTTA	
   2287161	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        22	    36	 100.0	    30	GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	                              	       

# Left flank :   AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAGGATGGAGTTGTTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCGATGTATTTACTTCAAGATCCATTTTTGAGCGACTTGCCAGTCACGGTTGAACCAGGCGGTAAGCTTGAACAAATCATGAAATACTGCAACGTTCATTTTGATGAGGCTGTCACGACAGAGTCAACCTCGAAGATTGAGGCGCTTATTCAGACGTTAACTAAATTGGAGGAAAAGAAACTTGTCATTCTTACAAATGTTAGTCATTATTTAAGTGCCAGAGACTTTTCGTCGGTGACTGAACAGATCGGTGATACTGAACTTCAAGTCGTTCTCATCGAATTCTCAAAGGTGAACAGAAAGAAGTACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGACAATCGCGAACTAGATTGATTAGGAGATTGTGTGAAAACACAG
# Right flank :  TGAATATTCTAATGTTGTTGGATTGAAGTCAATATTTGAGACAGATTTTAAGAGACATTCAGAACCGCGTTTACCTTCCACAGCTCAAATAAATCATCAATTGCGATTAATAACTTATTTGAACCCTGGAAAGCATTAAGTCAGGCGGCCATTTGGCTCGTAAGTGTTGCAATTTCAACTTGTAAGGGGGTCTGGTAGCCCAGTGAACTATGAATTCTCTTCCTATTGTAGAAAGCATGCACATATTCAAAAAGGACGGCAGCGGCAGTTTCATAATCTTCAAAGACCGGCACTGGATAAACACATTCCTTTTTGAGGGAAGCGTGAAAGGATTCCATTGGCGCATTATCATACGGACAACCCTTACGGCTGTATGAGTGGCGGATATGTAGTTCAGTTAAACGTTGATTGTAATCATCGCTGGTATACTGTGATCCTAAATCCGTATGGATAATCAGGTCCCCAGTAATGGTTCGATTTTTAACCGCGCTTTCAAGGGC

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,4.87   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//