Array 1 37216-37583 **** Predicted by CRISPRDetect 2.4 *** >NZ_AYZL01000010.1 Holzapfelia floricola DSM 23037 = JCM 16512 strain DSM 23037 NODE_27, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 37216 36 100.0 31 .................................... ACAGGTCAAGACTACGTCAATGATCAACCAC 37283 36 100.0 30 .................................... GTTGAAGCAGTATAGAACTACTGGCTACTT 37349 36 100.0 30 .................................... TAAAATTATGAACACAGTAAACTTAATTGG 37415 36 100.0 30 .................................... AAGCTACTTACACCGCTGTTTGTCCCTTCG 37481 36 100.0 30 .................................... TTAAAAGCTTTAACATGTGGACCCAATCTG 37547 36 91.7 0 .................................TGA | G [37578] ========== ====== ====== ====== ==================================== =============================== ================== 6 36 98.6 30 GTTTTAGAAGTATGTCAAATCAATAAGGTTAATACC # Left flank : CCCTTGGTAGTTAATTTTGATTATACTAATGCCAAGCTATTTAAATATGCCGAAGTAAAATTTGATTCAACTATTTTTCTTAACCCTTTGGAATTATTGCTAACTTATATTAAAATTCATGCTGAGTGTCAAGACGAACGAATTGTTACAGTTATTAACCCCAGTCATTTTTTAACCGTGGAAGATATGATAGTTGTAGAGCGATTATGTCAGGAAACACAAGTTTCTTTGTTGATGATTGATTATTTACATCAAGTAGATTTTATGAACTATTCTCACTGCCTAAAATATTATATTGATGAAGACTTTATTGATTATTTCTAGTATTATTTATATAATTAAGAGGTCAAATCAAAGTTAGTTAGCCACTAACATACTTGTATTATTAAAATATAATGAAATATCTCAATTGTGAAAAAAGAAAGCTTTGGAGGCTTATTTAGTAGTAATTGATTAAGGTCAACTTTATTGGTTAATGACATGTTTATGATAAAATGATG # Right flank : AATAATTGAAGTAAATTGAGAATATGAGTATAGAAGAGTTGAGCTATGAAAAAAAGTTTGACTCTTTTTTATTTAAAAATCAATTAAGTTCATCATCATATCAAGATAAATTAAAGCCGACATGATAGGGTTAGTATTCAAATGAATTCTCTTTGGAGGAGAAACGATGAAATCTATTAAGAAAAGACAGCTTTTATTGGGGTTAGTTGTCTTATTGTACAGTATTATCGTATTATCTTATGCACTTTTTCCTAAAGCTGAGTTGAATCAATTTTTATCAACACAATTAGGGCTAGCACAGGTTTATGCATTTTCACTGTTTTTTGGTATTGTGATCATAATCTTCGCATTATTAATGATTGGCGTGAATAGCTACAAGAAAGATAATCGAAAGCCCTCACTTATCATGTGGTTAATGATGATAGTATTATCAGGCGTCTTAGTCGTGGGTAGTTGTGAGAGGAGCTTTACTAATCAGTTGGTTGATTCAAACCAGTCAT # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTATGTCAAATCAATAAGGTTAATACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 4248-3733 **** Predicted by CRISPRDetect 2.4 *** >NZ_AYZL01000019.1 Holzapfelia floricola DSM 23037 = JCM 16512 strain DSM 23037 NODE_60, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4247 28 100.0 33 ............................ TTAACTGGCAATGTCCCCAATTTGAAAATTGGG 4186 28 100.0 33 ............................ CGAACGTTAACCACTTCATCAGTGACTAAACGT 4125 28 100.0 33 ............................ TTCATAGACGTAGCTCTTTTAAGGTTCTTTTGA 4064 28 100.0 33 ............................ TTAAAAAAAACAAAGTATTTAAATTTAAAATCT 4003 28 100.0 33 ............................ TCGAACCCTTTCAAGACGCCAGTATCAGTTCAT 3942 28 100.0 33 ............................ CGAGGAAAAACTCGATATCGAAGCCAAGCAAAA 3881 28 100.0 33 ............................ TGAATTAATCATCAACTATGATGCAGATTATAA 3820 28 100.0 33 ............................ TCACAGCTAAAATCACAACTTGATAGTACGCAA 3759 27 85.7 0 ............C.........CA.-.. | ========== ====== ====== ====== ============================ ================================= ================== 9 28 98.4 33 CTTTTTCTCGCATACGCGAGAGTGATCC # Left flank : AGGGCAATACTATATTGGCAATGTTGTGGCTTCTATGGGCTATCCCAAAAAAGTCTTAGACAGCCAACCGTTACCCGTATTTAACGATACGATTGACGTTGATTATGCTGGTGTTAAAGAAATCAATAATCAATTTGTTAGTTCTGGCGGTCGCGTATTGATGGCAATTGCTCATGATCAAGATTTAGCTAAGGCACAAACAAAACTTAATGATGCTTTAGCTCAGTCTGTTAACAAAGCTCATTATCATTACCGAACAGATATTGGTAGTAAAGGAATTAAATTTTTAAGTGCTGAGAAAGTTTAGTAATAAAACAAAAAAACGTCCATGTTATTGGACGTTTTTTTTATAGTGATTTTTTCTAATTTATCCACGTGAACTCATTGACAAAGTTATCCTTGTTGATTAGGCTAGTTGACCATAACGGCAACTGGTAAAAAGTGTCTGAATTTGATACACTATAAAAAATGAAACGTTGATTTGATGGGATTCTGTTAGT # Right flank : TTTCAAACTTTAAAAATCATATAATAATAGCCGCTACATTTTTACTAATTTCATTAATCGCTGTATACTATAAAGTACTTAGTTGAAAGAAGAATAACATTATGAGAAATAAACGTTTAGCGGTATATTGCGGTGCCAAGATTGGCAATAATACCAAATATAAAGAAGCTGTCATGTCACTAGGTCAAAAAATGATTAATCATAATTTTGATCTTGTTTATGGAGGCGGAACAGTCGGGTTAATGGGTGTCATTGCAGAAACCGTACTGCAACAAAATGGCGAAGTCTATGCAATCATGCCTAAGTTTCTCAAGGATTTAGAAGGTTTTGAAGACGAAGCGCAACACACTGAAATTGTCGACAGCATGTCTGTTAGAAAGCAACGTATGCTAGAACTATCAGACTTTTGTATAGCCATGCCTGGTGGTGCGGGAACATTAGAAGAAATCGTAGAAGCTTATTCATGGCATATATTGGGTCAAGTCAATAACCCTTGTGCT # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTTCTCGCATACGCGAGAGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.80,-8.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 2 21229-21593 **** Predicted by CRISPRDetect 2.4 *** >NZ_AYZL01000019.1 Holzapfelia floricola DSM 23037 = JCM 16512 strain DSM 23037 NODE_60, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 21229 35 94.4 30 .A.-................................ GAAGGTGCTAAAATCGTGGCAGATTCCGCA 21294 36 100.0 31 .................................... ATTTGGTCAACCTGGTATCGAAAAACTACCG 21361 36 100.0 30 .................................... GTGTTGAAATTACTGCTGATGAGAAGGCAA 21427 36 91.7 29 ...............................A..CA GTTATCAGTATAGATGGTGAGTATGACAA 21492 36 100.0 30 .................................... ACCGGAGCTTTCCAATCAGGCGAACTAACA 21558 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 6 36 97.7 30 AGTCCTAACATTATTCAAATGACATACTTCTGAAAC # Left flank : GATTATGGTCATGGTGATTATCATACGTTGGATAAGAATGGTTGTGCAATTGTTGCACTATCTATGATTAATGCTTACTTTGATCATGAGACAACGACCCCGAACAAAGTGCTAGATTGGGCGCAGAACCGTTACTTTACGGATTATGGCACTTCTTGGCAAATATTTGATGATTTCGCCAAGAATTATGGTTATCATGTTGCGGATTTAACCGATAATCTTGAACTAGCCACTTCTTATTTAAAAATTGGAATTCCAGTTGTGATTTCAGTTAATCCTGGCAAATTTACTAAAGTCGGTCATATTATGGTATTAACAAGTATGGATGAGCAAGGTATTCATTTGCTTGATCCAAATGACGATGATACTAAAAAACATAGTCTGACAACTTATACCGTTGAGGATATCAAAAGTGAACTCAAAAATATGTGGGTTTATACTAAATAAAAGAAGGACGTACTCTAAAAGAGTAGTCCTTCTTTTTTATGTTCTTGGTACAT # Right flank : CCGATGTTTTATCAGAAATAACTCATACTGAAAGTTAATGACTAACGCTAAACAAAGGTTTCAGATTAGATTAACCCTTTAAAAATAGGTGTTCAAGCTAATTTAATTGGGTCTGAGCTAGATTAAAACTAAGTGAAACAAACTTCTACCACTACTATTACAAATATTGTTAAAAATTGCAACAAAAAAACCTCTTTCAATTAAGAAAGAGGTCTGACCTCAAAAAGAGGTTCAAAATATAAAACTTGGAATAAATCCTTGTTTGATTTCAACTCAGTATGTCATTTGAATAATGTTAAGAACATGTCAAATATAATACATTAGTTGATTGAAGTCAAGGTTAGGATTCGAATAAACAAAAGTCCTCATCAATTAGATAATCTGAATGATCATCACTAGATTTTGATTGATTAAACTCAATAGACAATGCGGTTTGGTCATAGTCAGATAATAATTCATTTAATTTATCAAAATCTTTGGAATCAAAATAATGAGTTAGA # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTCCTAACATTATTCAAATGACATACTTCTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [2-3] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //