Array 1 1-324 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIYF01000036.1 Kallotenue sp. CFH 73958 Scaffold36, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================== ================== 1 33 100.0 40 ................................. GGCACCCCGGCGGCGCGGCCTGGCAGGGCCTGGCAGGTTG 74 33 100.0 40 ................................. GGTTACTCATGCGCGGTGGCGGCGGCGGCGGAGATGGTTG 147 33 100.0 40 ................................. CATCTGTCAATACCATCCGTTCGCATCGTGGAACGCGTTG 220 33 100.0 39 ................................. TTAGCACGATTGCGCAGATCCTCACACTTCGTTACGTTG 292 32 81.8 0 .................-.C..G.C.C..C... | C [318] ========== ====== ====== ====== ================================= ======================================== ================== 5 33 96.4 40 CGCCCGGCCTCCGGGCCGGGCGAGGATTGGAAC # Left flank : | # Right flank : CCGGCGCTACGCAAGAGGCGAGGAACCCTCCGGTCAGAACGACCCGCGCGGCGGACGGGCGCTGCGGCTTGACCGGGGTTTGCGCGCGAGCCTAGAATCGTTTTGCATATCGTGGGGGCCGGATCGAAGCCGGCTACAGCGGGCCGGAGGGAGGACGAATGGACGCATCCGAATCCAGGGCCGGTGCTGTGACCGAACAGCCGCAGCTGACGCGTGCTATCGGTCCGGTGTTGCTGCTGTTCTTTATCGTGGGTGACATGATCGGCGGCGGTATCTACGCGTTGGTGGGGGAGGTCGGCGCGATCACGGGCGGCGCCATCTGGAGCGCGTTCCTGCTGGCTCTGGTGCTCGCCATCTTCACCGCCTTCGCCTATGCGGAGCTCGTGACCAAGTACCCGCGGGCCGGGGGCGCGGCGACCTACACGCACCGCGCCTTCAGGACGCCGTTCTTCAGCTTCATGGTGGCCTTCGCTGTCGTGCTCTCCGGGGTAACGTCGGCC # Questionable array : NO Score: 2.88 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCCCGGCCTCCGGGCCGGGCGAGGATTGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.70,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 1 55135-53485 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIYF01000040.1 Kallotenue sp. CFH 73958 Scaffold40, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 55134 37 100.0 36 ..................................... GGCGGCGGCTCTGCTGGAGGGGCGCGGCCTGGAGGT 55061 37 100.0 35 ..................................... GCTCGAAGCGTGGGAGCGCGACCAGGAGATCCGGG 54989 37 100.0 35 ..................................... TCGCAATCGGAGCCTGCATCCTGAGCCTGAGCGAT 54917 37 100.0 36 ..................................... CTCTGCGCCACGCTGCAATCGAGGATCTCATGCTCG 54844 37 100.0 37 ..................................... AAGGACACGGCAATCCGAGACGACGGAGCGTCGTCTC 54770 37 100.0 37 ..................................... AAGGACACGGCAATCCGAGACGACGGAGCGTCGTCTC 54696 37 100.0 37 ..................................... AAGGACACGGCAATCCGAGACGACGGAGCGTCGTCTC 54622 37 100.0 36 ..................................... GAAGACCGCGCGCGCGTCGGCCGAGAGCTTGTTCGG 54549 37 100.0 39 ..................................... GCATATGGCATGGGCCGGAGGGACGATGGCCGGCACCAT 54473 37 100.0 36 ..................................... GATAGATCCTCCCGTCTATCCTGTAGCGGTAGAGCC 54400 37 100.0 36 ..................................... AGGCCCAATTCGGGTGCGTGCTCGGCAGCTCCCTCA 54327 37 100.0 36 ..................................... CGCATGTCCGGCGCAACGTCATACGCCGCCGCCCCG 54254 37 100.0 37 ..................................... CTCGGCGAGCCGGGCGCGGCAGGCGATGATGGTGGCT 54180 37 100.0 37 ..................................... ACCATCACGTGGTCGACGCCGCGCTCTCCGTCTCTCG 54106 37 100.0 38 ..................................... GCTGTAGGGGAGGCGCCGCACCCGCCGCAGGCTCCACG 54031 37 100.0 38 ..................................... ATGACTGGAACATGCGCGCATACTCCGTCCACGTCCCG 53956 37 100.0 35 ..................................... TCCGTACCTGGAGACGGTGGTGCGGGAAGGCGGGA 53884 37 100.0 36 ..................................... TCAAAACAAGAGAGAAGGGAAACTTGTCCGATAGCT 53811 37 100.0 36 ..................................... TCAAAACAAGAGAGAAGGGAAACTTGTCCGATAGCT 53738 37 100.0 37 ..................................... AACACCGCCTGCCGAAGACGTAGAGCTCCCCGGCTCC 53664 37 100.0 33 ..................................... CAGCGGATCGCTCATGCCTTCCTCCTCCTCCTT 53594 37 97.3 36 ............T........................ GCATGACCGCGTTCGGCACGATGGCGTAGCCGGCGG 53521 37 81.1 0 ............................TGTCA.TG. | ========== ====== ====== ====== ===================================== ======================================= ================== 23 37 99.1 36 GTTGCAGAGCAACTCCCGTTAGATAGGGAACTGAAAG # Left flank : CTCGACGCAGGTCCCTCGGAGAGCGCGCGGAGCAGCACCAACACACCTCGAGCCGCCCCCATCTCTCCCACCTCAGCCCCTCACCTTTCGCAAACCTCCGTAGCAAAAAGCATCAAGCTCGCGCACCCTGCGCCCCCTGGACACGGGTTGACTCACATTCTAGCTGCAAAACCACACAAACCCACCGTTCGCAGACCGGCAGGGCAAAACCGCAAAAAGGCACCTTGCGAACCGTAGTCTGAATCACCTATCATGCTAATATCCATCGAGAAGCACCCACCCCTGGAAACAGCGGGTCAGAACCTTGAAAACCGCCAAGGAAGAGGCGGATAATAAGCAGCAACAAGCTCGCACAAGTNCACCTTGCGAACCGTAGTCTGAATCACCTATCATGCTAATATCCATCGAGAAGCACCCACCCCTGGAAACAGCGGGTCAGAACCTTGAAAACCGCCAAGGAAGAGGCGGATAATAAGCAGCAACAAGCTCGCACAAGTCCG # Right flank : TCATCCAAAAATGTAGGTTGTTATCATCGAAAAATGTAGGTCGAGTGGCGGCCCTCTGGGCCCTCAATCTTCTGCTCGCCTTTCGGCCTCACCTCCCTCCTCGTCCGCGGCTCCCTTCATGACCTCCAGCCGTCCGCGTAGCCTGTAGGAGGGCCCGTTTATGGTCAGGACCTCTGCATCGTGCAACAGCCTGTCCAGGATCGCCGCGGCCAAGACCTCCTCACCGAAGAGTTCGGCCCACTCCGAGACCCGCTTGTTTGAGGTGACGACCATAGAGCCCTTGGTGTAGCGGCGGTTCACCAGCTGGAAGAAGCGGTTGGCGTCCTCCCGTGCGAGCGGCAGGTAGCCTACCTCGTCGCAGATCAAAAGCTGGGGCCTCTGGTAGTGGGCGAGCTTCTCCCTGAGCTTTCCGAGCTGGTCGGCCCTTCTGAGGTCCCGCACCAGGTCGTCTAAAGTGAGGTAGCGCACCAGGTTGCCGCGACGCAGAGCTTCCATGGCCA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGAGCAACTCCCGTTAGATAGGGAACTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.60,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 1-259 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIYF01000046.1 Kallotenue sp. CFH 73958 Scaffold46, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 1 37 100.0 35 ..................................... ACTCAGGCGGATGTATCGAAGATCGCCGCCAACGA 73 37 100.0 37 ..................................... GCGCGTACCAGTAAGAAGGTGTCCAGCCGCGCCGGTG 147 37 100.0 39 ..................................... CAACGCTACGCCCCGGCTTTGCGTCAGGGTCAAAAACCG 223 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 4 37 100.0 40 GTTCCAATCCTCGCCCGGCCCGGAGGCCGGGCGCAAC # Left flank : | # Right flank : CGGCGATGCTGAGACCGGCTTATTTATGGGGGTTTAGGCAGCATTTGCGCGCACCTGCCTTTCTACCGGGTAGTGTTGGAGGACTCCGACGTTAGTGGGAAGAGAAAATAACAAGCCTTGCTGGTGTTTTTGGAGTGCGCGAACTTCATGGGGTTTAGGTGAGAGCTTGCGGTTCGCGCGGTCAATATCGGGCCTTCCTCAAAAAACCAGCGGGTCGTCGTAGGACACGTAGCTGTTCTTTCCGTAGCACTCGAGGAACTCCTCTCTCGGCGCCTGGAGGCGGTAGATCCTGAGGCTGTCCTCTCCTTCGTCTATGATCTTCAACAGGCGCGCTCTGAGCGACTCGTACTGAGCTTCGCTGACGCTACACTCGAAGACGGAGTACTGGACGCGTTGTCCAAAGTCCTTGCAGGCGGTGGCGACCCTGCGAAGCCGGCGTCGACCTTCTTTCGTCTCTGTATTCACGTCGTAGGCTACAAGGACATCCATGCAGCACCTCT # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATCCTCGCCCGGCCCGGAGGCCGGGCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-18.90,-21.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 1 78-1143 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIYF01000048.1 Kallotenue sp. CFH 73958 Scaffold48, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 78 29 100.0 32 ............................. TGTGTCACGGATGCGTTTATCGATCTGATGGA 139 29 100.0 32 ............................. TCGCCGAACTGCGTGCCTTCATCAAAGAACAC 200 29 100.0 32 ............................. GAACGTGTGTTGGTTCGGAGGTGAGTCATGCC 261 29 100.0 32 ............................. AGCATACAAGGCGGCGTTTTCAGTGCGGCGAT 322 29 100.0 32 ............................. TCTGGCATCATGTGAGCGGCCGGCATGGCGCG 383 29 100.0 32 ............................. ATTGCCGCCGCCGCCCTGGTCGGTGAGTCGGT 444 29 100.0 32 ............................. TTTTGTGCCAGCGCGCCGACCGTCGTGAACGG 505 29 100.0 32 ............................. GCAGCCACGAGATCCACCAGCGGCGTGGAAGG 566 29 96.6 31 ............................A TGGGCTACCGCTTCCATCTGGCGAGGGTTGA G [588] 627 29 96.6 32 ............................T GTAGGGGCACGGCATGCCGTGCCCCTACCTGA 688 29 79.3 32 ..TA..........T.C.A.........T TTCACTGATACTCCCGCTCATGCGCGTATACC 749 29 82.8 32 ..TA..........T.C.A.......... TACCGGCCCGTGACCATCCACCCACATCACCG 810 29 86.2 32 ..TA..........T.C............ AATTTTGCGTCGGCCACGCGCGTACGAATTGT 871 29 72.4 32 C..T.T........T.C....A.A...T. CCCGGCGGTGCTGGCGATAGCTCGCCCAGACA 932 29 69.0 32 C..T.T........T.C....A.A...TT GCAGAACGCCGATGTTGGCGGCATCGGGTGTT 993 29 72.4 32 C..T.T........T.C....A.A...T. ATAGTCAGTCCCCCACCACTAACGCTGGTGGG 1054 29 69.0 32 C..T.T....A...T.C.AA........T GTAGGGGCACGGCATGCCGTGCCCCTACCTGA 1115 29 82.8 0 ..TA..........T.C.A.......... | ========== ====== ====== ====== ============================= ================================ ================== 18 29 89.3 32 ATCGTCCCCACGCACGTGGGGGTGAACCG # Left flank : ACCATTTGTGTGTCCGAAATCCCGGGGACACTATAGGGTGAACCGGCGACGGACTCGTAGTTGCCCAGGTTATAGACA # Right flank : GGCGAGCGGCAGGTATGGATCCACGGCCCACATCCGCTGATTTCTTCAGGCTTTTATCATTATGTCGTCCTTTACCCCTCCCTGCCGGCTTGTTACAATGCCGGTGAGGAGGATTAATGGTGCGACGCTGGTTACTGTTCGCCGCTGTACTCGCGGCCGCTGGACTTATGCTGGCCGCCGTGGTCTTAATCCGGCCCGTCCGCGCTGTCGTCCGGTCGATCGCGCGGCCGGAGCCGCCCGCGCAGATCACGCCGCTGGCCATGACGCTGCCACCAACGCCTCACGCCGCGCCAAACATGACTCACCCGCCCGCCGCAGTGACTCATACGCCCGTGCCAGTGCCTGCGACGCCAACCTCCACTGCCATGAGTCACGTCGCGCCGACGCGTGAGTCAGCGCCAACCGCGACGCCGGTGCCGACTCAGACGCCCGAACCCACGCCGACGCCCGGCCCGATCGAGGTCAACGGGCGGCGCTACGACGCCTATATTCCGGCGGCC # Questionable array : NO Score: 5.41 # Score Detail : 1:0, 2:3, 3:0, 4:0.46, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGTCCCCACGCACGTGGGGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGATCCCCACGCGCGTGGGGGTGAACCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-48] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 288048-289222 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIYF01000005.1 Kallotenue sp. CFH 73958 Scaffold5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 288048 37 100.0 40 ..................................... TCCGCACGCGAAACGCGCGCGTTATGTCCACACGCTGGAC 288125 37 100.0 40 ..................................... TCCGCACGCGAAACGCGCGCGTTATGTCCACACGCTGGAC 288202 37 100.0 46 ..................................... TCTGGATCTGACGCAGGCACATTGACAAGACGATCAAGAATATCAT 288285 37 100.0 38 ..................................... GCGGATCAGGCCGACCCGGACGAGGCGTCCGCGATGCG 288360 37 100.0 38 ..................................... ACAGCGTTTACGTTATCCGGAAATACTCGCAATAAAAA 288435 37 100.0 35 ..................................... GCGAAGATATCCTCCGTCGTCATGCCGTCGTATGT 288507 37 100.0 42 ..................................... GTCATTGAGTGCCAAAATCACATCGAAAAGGGTAAACATCAG 288586 37 100.0 39 ..................................... ATCACACCATGATCGAGCCGTCTATGTGCTCACATTTTG 288662 37 100.0 35 ..................................... TCGAAGATATCCTCCGTCGTCATGCCGTCGTATGT 288734 37 100.0 35 ..................................... GCGAAGATATCCTCCGTCGTCATGCCGTCGTATGT 288806 37 100.0 35 ..................................... GCGAAGATATCCTCCGTCGTCATGCCGTCGTATGT 288878 37 100.0 42 ..................................... GTCATTGAGTGCCAAAATCACATCGAAAAGGGTAAACATCAG 288957 37 100.0 39 ..................................... ATCACACCATGATCGAGCCGTCTATGTGCTCACATTTTG 289033 37 100.0 40 ..................................... TCTGATCGCGCTACACGCGTCGCATGCGCCAGTGGTAAAC 289110 37 100.0 40 ..................................... CGAAATTTGGCGCGTGTGGACTGATGACATGCATCGATTT 289187 36 81.1 0 .........................-.....ATGGTA | ========== ====== ====== ====== ===================================== ============================================== ================== 16 37 98.8 39 GTCTGAGTCACCGCCCCGACGTTGAGGGGATTAAAAC # Left flank : AACCAGAAAGGGCGACACCGACGGTCACGCCGACGGCCGCTATCACGACCCGACCGACAAAGAAGCGGCGATCAAGCTGTTGCTGGACGCGCGCGAAAAGCAAGAGTTCATCACCGGCCTGATCTACATCAACGAGTCACGGCCCACGCTGATCGACATCGCGCGCATCCCCGACGAGCCGCTGGCGCGCTTGCCGGAGGCGAAGCTGCGTTCGACGCCCGATCAATTCGCGGCGGTCATGCGCGAGTTCGCGTAACGCGCCTGCCGATGCATCCCGCCTCCGCTTTCGCCGACCAGGGAGCGGAGGCGGGAACCGTCAGGCGTCCTGGCATCCACGCGCTTGCCTGCGCGGAGAGCCTCGCGATCGCTTCAGGAAGCGATAAAACCGCCGCGCAACCCGTGAAATAGCGTTGAAACGCTTTACACTTTTGCCCCGAAATCGCCATGCCTCGCAAATCGCGCTTTACAACCGCTCGATATGCGCTATAATAGGCCATGGG # Right flank : AGGGCCGCCATATATGGCGGCCCTACGAACGACCATGAATGATTCATCGTTGGGCCGATGCAGGGATGAAGCCCCGCCTCTGGTAGGGCCGCCATATCTGGCGGCCCTACGAACGACCATGAATGATTCATCGTTGGGCCGATGCAGGGATGAAGCCCCGCCTCTGGTAGGGCCGCCATATCTGGCGGCCCTACGAACGACCATGAATGATTCATCGTTGCGCCGATGCAGGGATGAAACCCCGCCTCTGGTAGGGCCGCCATATATGGCGGCCCTACGGATGATTCATCGTTGCGCCGATGCAGGGATGAAACCCCGCCTCTGGTAGGGCCGCCATATATGGCGGCCCTACGGATGATTCATCGTTGCGCCGGTGCAGGGATGAAAACCCGCCTCTGGTAGGGTCGCGGGATATGGTAGGGCCGCCATATATGGCGGCCCTACGAATGACCATGAATGATCCATCGTTGCGCCGATGCAGGGATGAAAAGCCGCATGGC # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAGTCACCGCCCCGACGTTGAGGGGATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.00,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 1 9474-9324 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIYF01000084.1 Kallotenue sp. CFH 73958 Scaffold84, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 9473 28 100.0 33 ............................ TCCGGCAGTTTCATACGATTTCAACCTGCGTGG 9412 28 100.0 33 ............................ GATCGATCGCACGGCCTGGACATGTTTTCGGAC 9351 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 3 28 100.0 34 TATAGCTCCACGCGCGGAGGGGTGAACG # Left flank : ACTATTTCTGTACAAGTAGGCCGCCGCGTCCGTATCACCCTACGAGTTGACGTGGATCAGTTGTCCACCAAGTCGTTGTACGCGCCGCATCCCTTCACGTAACACCGCTCTAGCAAGCCCTTTCCGTTGATGGTCTGGATGACACCCAACAGGTTCAAACGTCCCGAAGTAATTGGCCGCGTCGTACCACACGAGCGCAAAGGCGGCAAAATCTCCGTCCGGCGCAACCACGACAAGATCGAGATCAGCACGGTACGTTGGTGCGGTCATAACAGCACGATGGATCGCCTCAGTCATTTTTGACGGTGCAAATGCTGCTCGATGCACCGCTGCTCGTTCGGCTATATCTGCATCACTTTGGATATGTCGAATCATGTACCCTGCGGGAAGCGGTGGTTCAGCAATAGATGTATCCAGTGGTTGTGTGTAGTACACAAAAAAATCGTCAGTCTGCGTGTATTCGCGCTGTTGCAACGCGGTATTTCGTACGGTATCGCAGG # Right flank : GTCTGCTGTATCACGCTCAATCGCAGCATGATTGGCTTCAGCCCAAGTGAGCAGGTCGTTGTTGAGGGCGGCATACTGCGGGTGGACAACAAGATCGACTTGTTCATCCGTCGGCCAAGCAAAGGCGATCAGGGTATGCTCTAGCGTGAACCAGAGGTGAGCACGCTGAATGACGTTCGGATCGGGGTCTGAGAAGCGCCACCAATCCAAGTCACCAAGGGTGCAATAAACGGGCGAACCACCTACAGCATACGCCGACTGCACCAATGAGCGCATCTGCTTGTAATCTGCTTCGTCATGATAGGGACGGTCGTAGAGTAACATAGGTGCCTCGTAAGCTAATGGAAAGTGTTGCGCCGGTGGATTGTGACACAAAGATTATGGGATGGCAAGAACATACATTGCAGAAGCAATGCTTACAGTAAGAGGCGGGCTAACTATTGATTCTCTGGAATTTTTCTGTCTAATCCCACAATAACGCGTGAAACACGGAAAACGGG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TATAGCTCCACGCGCGGAGGGGTGAACG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.60,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 1 227796-229839 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIYF01000009.1 Kallotenue sp. CFH 73958 Scaffold9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 227796 29 100.0 32 ............................. GCGGCGCTTGGTGCTGCGGCCCCCGGTGAACA 227857 29 100.0 32 ............................. GCGGCGCTTGGTGCTGCGGCCCCCGGTGAACA 227918 29 100.0 32 ............................. ACCAGTTCGTTGACCAGCTTCTTCACGGCAGG 227979 29 100.0 32 ............................. AAGGTGACAGCACTGCCATTTCTTCGCACTGT 228040 29 96.6 32 ............................A GCGCACCAGCGACAGTGATGCGACCTACACAC 228101 29 96.6 32 ............................T TACCTGTCCGCCAAAATCGGCGCGATCACCGG 228162 29 100.0 32 ............................. TTGCGAACGCCGGCAGCAAAACCGGGAATCGT 228223 29 96.6 32 ............................A GCCGCCCGATGGCCTACCCTTCGCGACTCTCC 228284 29 100.0 32 ............................. CGGAGACCCGAAGTTGACCCAATTGTTCAGGA 228345 29 96.6 32 ............................A GCCGCCCGATGGCCTACCCTTCGCGACTCTCC 228406 29 100.0 32 ............................. CGGAGACCCGAAGTTGACCCAATTGTTCAGGA 228467 29 96.6 33 ............................A GGTCAGGCATCCTTCAGGCAAGCACGAAGACAC 228529 29 100.0 32 ............................. CCACCGTTGACGTAGTTTGGATCGCTGGTCGC 228590 29 96.6 32 ............................A ACCAGCCGTACTGGGTGCTTGTCAGGTAGGCC 228651 29 96.6 32 ............................T GTCGCGCAGCGGCACGCCGGGGATGAATTGCC 228712 29 100.0 32 ............................. GCGTACCGCAAGATGGGCTACCGCTTCCATGT 228773 29 96.6 32 ............................T TGCGCGCTCGCCGCGCTCCCACTGCTCAAAGA 228834 29 100.0 32 ............................. TCGTGTCCCGGCCGCATGAACGATATGACCCA 228895 29 96.6 32 ............................T TTTCGCAAAATTACGACGTATGAGCCGCTTGA 228956 29 100.0 32 ............................. CGCTGGCGCGTCTCGCCGCCGATCGTCTCAGC 229017 29 100.0 32 ............................. TCCTGCCGCAATTTATGCCGCAATGCAAGATA 229078 29 96.6 32 ............................A GCCTGGGATTACTTGCAACTTGACGAAGTTTC 229139 29 100.0 32 ............................. TTTTGGAGTTCGGACGATGCATCAACGATCAC 229200 29 100.0 32 ............................. TTGACGCCCATCCTTGAGGCGATCATGTATCG 229261 29 100.0 32 ............................. GACAGCAACATAGTCAGCAACGCCGTGATGAA 229322 29 100.0 32 ............................. GGCTCGCAAGCGCGGGCACTCCTCTATCGACT 229383 29 100.0 33 ............................. TGTCCGACCGGCGCTGGTCTAGACTGCTCTGGT 229445 29 96.6 32 ............................T TCCCACCACGTACGGTATCTGTTGTAATTTGC 229506 29 96.6 32 ............................T TCCCACCACGTACGGTATCTGTTGTAATTTGC 229567 29 96.6 32 ............................T TACCCTTGATGAGCTTGTCGAGCACGGTCGAG 229628 29 100.0 32 ............................. CCGGATTGTACGTCCGTGATTCCCTTGCTGAG 229689 29 96.6 32 ............................T TGTTCAACACTTGTTTGAAATGTGTCACTGTC 229750 29 96.6 32 ............................T TCACGGTGAAGGATAATTCGCCGCCATCACGA 229811 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= ================================= ================== 34 29 98.4 32 ATCGTCCCCACGCACGTGGGGGTGAACCG # Left flank : CCGGGATGTATTTAAGGAGCGTCGGCTGCTAGCGCGCATTGTCGATGACATCGACCGCGTGCTGGACATCAGCGCTGCGCTCCAGAACGAGGAACTGGACGCCGATGCCGGCGCGTTGGGCACCCTATGGGATCCGGAACAGGGCGAAATCGCCAGTGGCATCAACTACGCCGACCTACTCGAACCCAACAGCGATGAAGCAGCGCCATGACCGTGATCGTGCTGGAGCGCGTACCCACCAGTTTGCGCGGCGAGCTGACGCGTTGGATGCTGGAGGTTCAGACAGGAGTATTTGTCGGGACCCTGTCGGCGCTGGTGCGCGACCTGTTATGGGAATACGTATGCGAGCGGCTGCGCGACGGCGCGGGCGCGCTGATCTACTCGACAAACAGCGAACAGGGATTTACGATCCGCACCTATGGCGCGATCAGCCGTCGCCTGCGGGACTTCGACGGCCTTCAGCTGGTCCAGATCCCGGTATAATGCGGCTCTAGCCCAGT # Right flank : GAATCCCTGC # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.82, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGTCCCCACGCACGTGGGGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGATCCCCACGCGCGTGGGGGTGAACCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [38.3-8.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 34283-29471 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIYF01000014.1 Kallotenue sp. CFH 73958 Scaffold14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================================================= ================== 34282 30 100.0 35 .............................. ATGACGTCCACCGGACCGCCGCAAAGATCGCACGG 34217 30 100.0 36 .............................. TGGCGGAACGGACCGGAGAGCGTAATCTGAGCCGGG 34151 30 100.0 38 .............................. TAGATCTGTACCCTCGCGTCGATGGCGGTCGAGCGGTT 34083 30 100.0 37 .............................. GTGTAGGAGACCTCCAGCGTCTCGTGGAAGATCTGGA 34016 30 100.0 38 .............................. AGGAGGGCTCCGCCCCCACCGCCTACACCAACGAGAAC 33948 30 100.0 37 .............................. GAGATCGCGCTGAAGCGGCTCGTGGTGCCGCTCGCGA 33881 30 100.0 39 .............................. TCGGAGTATCGTGGCACGCTCTCGAAGGACCCTTCATTC 33812 30 100.0 38 .............................. ACGCCCTTAGAGCGCAGCACGGCGCGGCTGGTGCTGAC 33744 30 100.0 39 .............................. AGCTCCGCCGCCAGTATCCGGCTGCCGCGCACCATGAGC 33675 30 100.0 39 .............................. TTGCCGATGCGGCTTAGGCTTAGGCAGAGCCGCCTCATG 33606 30 100.0 37 .............................. ATGAATCGGAGACGCGGCTAGAGTATGCCACATTAAA 33539 30 100.0 35 .............................. TCTGATAAGCCGAACGCCCAGGGGGCGGGGACCGG 33474 30 100.0 37 .............................. TGGACCTCAATTCCTCGGCGCTTCCTCCCAGGAACTA 33407 30 100.0 38 .............................. CTGGTGGTCGTGCACGGGACCCTCGTGCCCGGCCACGA 33339 30 100.0 37 .............................. GAAAAACGCTCGCCCATCGGCGCGAACTCGCCCTCCA 33272 30 100.0 36 .............................. CCCCTCTCGGAGCGGTTGGCCGCGTCGAAGAGCTCG 33206 30 100.0 36 .............................. ACCTGCTCGCCGTGCAGCGTCGCGATGCCGCCCTCG 33140 30 100.0 38 .............................. TCCGATTCAGCGTGTCCGTCTTTCCCTGCAAATACCAG 33072 30 100.0 39 .............................. TGGACGGCTGCCAGGATGCGGGCCTCGTCTTCCGTGAGG 33003 30 100.0 37 .............................. TATTCTTACGAGACCGTGGCCGCCGGCGCGCGCTTCC 32936 30 100.0 37 .............................. AGGGAATACATCGGGTTCATCGCGAATCCGCCGGAGG 32869 30 100.0 36 .............................. CGTTCGGAGGCGAAGGAGATCCTCTCGCCCGAAGAG 32803 30 100.0 57 .............................. GCGTCCCGCTCGGCGAACGAGAGAGCGGCCTCCTCGTCCGGGCGCCTCTCGGGCGGG 32716 30 100.0 37 .............................. CAGGTCAGGCAGCGGTAGTCCTTCGGGGTCTTCGCCG 32649 30 100.0 36 .............................. ACGGACGAGCGGATTTTCTGTCCGACCGCGTAGTGA 32583 30 100.0 38 .............................. CACACCTCGGCGGTGAGGGCCACGAGCTGCTCCTCGTA 32515 30 100.0 37 .............................. TCGGCTTGCGTCGGCGTCTACCCAATCACGTCCGTGC 32448 30 100.0 38 .............................. TTTGCGCGGCGACGGATCATGGCAGAGCGTCATACCGA 32380 30 100.0 38 .............................. TGGCCTCGGCGGTGGCGTTCGGCATGAGGTGGCCGTAG 32312 30 100.0 38 .............................. TGGCCTCGGCGGTGGCGTTCGGCATGAGGTGGCCGTAG 32244 30 100.0 38 .............................. TTCAGGTTGCGAAGCCGGATCTCCACCGGACCCAGCTC 32176 30 100.0 38 .............................. TGGCCTCGGCGGTGGCGTTCGGCATGAGGTGGCCGTAG 32108 30 100.0 38 .............................. TTCAGGTTGCGAAGCCGGATCTCCACCGGACCCAGCTC 32040 30 100.0 38 .............................. TGGCCTCGGCGGTGGCGTTCGGCATGAGGTGGCCGTAG 31972 30 100.0 38 .............................. TTCAGGTTGCGAAGCCGGATCTCCACCGGACCCAGCTC 31904 30 100.0 38 .............................. TGGCCTCGGCGGTGGCGTTCGGCATGAGGTGGCCGTAG 31836 30 100.0 36 .............................. TTATCAGCGCATGGTCGGTAGCGGTCATGCTACTGG 31770 30 100.0 38 .............................. ATTTCCCGAAGACTCGGCGCCCGTCCCCCTGACCCTGG 31702 30 100.0 38 .............................. ATGGACCGGGCGGCGGAGTGGCTCTCGGGCACTGGGGC 31634 30 100.0 38 .............................. GCAGGCGACCCTCGAAGACGACCGCTCCCGCCGAAAAG 31566 30 100.0 35 .............................. GCGAAGCGGGGCGGTGGGCATCACGGGGAGCCCGG 31501 30 100.0 77 .............................. TGGTCCTGGGCGCTCAAGGACGACCCGCCCGCCGGGCGGCCCGAAAGCGGGCCGCCCGAAAGCGGGCCGCCCGGAGA 31394 30 100.0 51 .............................. CCTTCCACAACGAGGAGGCCAACCGCTTCTCGGCGCGGCTCGCCGCGGACG 31313 30 100.0 37 .............................. CCTCGTGTGGCACCTGGACACCGGCGTATCTGCGGTC 31246 30 100.0 38 .............................. CTCTCTCCGGCGACGGTCTCGTCACGCCGGTACTCCTC 31178 30 100.0 38 .............................. GGCCACAGGACCTCGCCGTCCTTGGCGTGGAAGACCGC 31110 30 100.0 35 .............................. AAGTACGTCCGGGAGATACACGACGGCTCCAACTA 31045 30 100.0 39 .............................. CCGGGCGGCGCTGGAGCGAGAGCGCGCGGAGAAGGAGGC 30976 30 100.0 36 .............................. CGGCTCAAGAGCGCCGTCCCCGGCGCGCGGCCCGGC 30910 30 100.0 36 .............................. CGTTGAAAGTTTCTGCGTAAGGATATACCATGCCCC 30844 30 100.0 35 .............................. TGGGAGTTGCAAGGCATAAGGGCGAGGCTGAAGTG 30779 30 100.0 35 .............................. TGGTCCTGGGCGCTCAAGGACGACCCGCCCGCCGG 30714 30 100.0 37 .............................. TTGTCCTCGAGGGCCAGGTAGAGGGCCGCGCCCGGCT 30647 30 100.0 38 .............................. GTGCCCCCCGCGCCCTAGGTTCGCCGTCTTCGCGCGAC 30579 30 100.0 38 .............................. CGCGCGATCCAGCCCTCGACCGCCTGGCGCGCTATCTC 30511 30 100.0 37 .............................. CCGGGGTTCATGCTTCTCCTTTCTCTCCTCACGCGGC 30444 30 100.0 37 .............................. TCCGCCGCCGCCATGAAGCCGTCCGCGCTCTGCGTGG 30377 30 100.0 38 .............................. AGCGTCCTGGCGCGCGGACGGGAAGGAGGAGGGCTAGC 30309 30 100.0 36 .............................. TTTGGCCCGTACGTCGTCGTTGGCAGGCGACCCTCG 30243 30 100.0 35 .............................. TGGAGGCGAAGGAGTGCCTGAGGGCGTGGAAGCTC 30178 30 100.0 41 .............................. TTGAAGGTCCTGCCGGGGACGCGTATCACCGGCTCGTCCAC 30107 30 100.0 37 .............................. GGACTCCGGCGGTCCAGCTTGGTGCGGGGCATCACAC 30040 30 100.0 38 .............................. TCGGGATGCTCGGGGCGATGGGGGTCGGCGCGGCCAAC 29972 30 100.0 35 .............................. GTGCTCGACGCCGAGGCCGCCAAGCAGATAGACGA 29907 30 100.0 40 .............................. GCAGGCCAGGAGGTCGGTGCAGCCGCACTCCACGCAGATC 29837 30 100.0 37 .............................. TCAAGATAGAATTAGAAAAATCCAGGAAATTCCTCGA 29770 30 100.0 37 .............................. AAGGCCACAGGGAGGTAGGGGCGTCGGCGTGCCCCGG 29703 30 100.0 38 .............................. ATCTCATAGCGGCAGAACACCTTGTCAGTGAAGATTTC 29635 30 100.0 37 .............................. CCGAGGCAGACGAGCAGGATGCCACGCGTCTCCTCTC 29568 30 100.0 38 .............................. AGCTGCGCGGCTGCGACCACCGGGATGCGGAAGTCCTT 29500 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ============================================================================= ================== 71 30 100.0 38 GTTTGCAGCCTACCTACGAGGATTTGAAAC # Left flank : CAAGATCGAGAAACACCTCCTTGACGACGAACCCTACGAGCCCTACGTCTCCAGGTGGTAGAGAGGACCCAAAGATGTTCGTGCTGATGGTCTACGACGTGGACGTGAAGAGGGTAACGAAAGTGCTCAAGATAGGTCGCAAATACCTCAACCACATCCAGAACTCCGTCCTTGAAGGCGACCTCAGCCCATCCCAGTACCAGAAGCTCAAGCACGAAATCACCAAGACCATAGACCCCGGCCACGACTCGGTCCGCTTCTATATGCTGCGCTCCACGAAATACATGACCGTCGAGAGGCTGGGCATCCCTTCCCGCCCCGGAGACGCCGGCGCGTTCCTGTAGTCAACCTCAGATAACGCAGAAACCCCAGGGGTTCGACGCAGCATGTTCTTCCTGGAAATCCTGGAAATCCCACCCACCGCAGCACCACTTCAGGATACAAACCTACTGTGGGTACCCTTGCGTAAAACCTCAGCAAACTGCTACATTTTGGATGTG # Right flank : ACGGGGCGCGTGCGGACGAGGCTCGGCGGATGAGATAGCATTGGTCCTCCTGTAGGAGAAGCGAGGAGTCGCGAGTGGCACGCAAGACTTACGATGGTCCGCCGGAGATGATGCTCGACCCGGAGAAAGAATACTACGCAAACCTTCTCACCGAGAAGGGAACGGTGAAGGTACGGCTCTTCTCCCGGGAGGCGCCGGAGACGGTGAATAACTTCGTATTCCTGGCGCGCGAGGGGTACTACGACGGGACGACCTTTCATCGGGTCATCGAGGGCTTCATGGCCCAGGGTGGGGATCCGACGGGGACGGGGAGCGGGGGTCCCGGCTACACCATCCGAGACGAGTTTCATCCGGAGCTGCGCCACGACCGGCCCGGCATTCTATCTATGGCGAACGCGGGGCCGGACACCGGCGGCTCGCAGTTCTTTATCACACATGCGGCGACGCCCTGGCTCGATGACCGGCACGCCGTTTTCGGCGAGGTGGTCGAGGGGATGGAG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCAGCCTACCTACGAGGATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [36.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 1 164261-180910 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIYF01000010.1 Kallotenue sp. CFH 73958 Scaffold10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 164261 37 100.0 36 ..................................... GCGGCCTGGCGCTGGTTGGTGAGCAAGGGCCGGAGT 164334 37 100.0 37 ..................................... GTCTGAGCAGCCAACGGATCGCAACGTGCAACGCCGG 164408 37 100.0 36 ..................................... GCGGCCTGGCGCTGGTTGGTGAGCAAGGGCCGGAGT 164481 37 100.0 36 ..................................... GCGGCCTGGCGCTGGTTGGTGAGCAAGGGCCGGAGT 164554 37 94.6 37 .............................C...G... GTCTGAGCAGCCAACGGATCGCAACGTGCAACGCCGG 164628 37 97.3 38 ...........G......................... GATGATGTTGATGCGGCGTTGGGCGTTGATCTTGGGAT 164703 37 100.0 38 ..................................... GATGATGTTGATGCGGCGTTGGGCGTTGATCTTGGGAT 164778 37 100.0 37 ..................................... GTCTGAGCCGCCAACGGATCGCAACGTGCAACGCCGG 164852 37 97.3 37 ..............G...................... GTCTGAGCCGCCAACGGATCGCAACGTGCAACGCCGG 164926 37 97.3 37 ..............G...................... GTCTGAGCCGCCAACGGATCGCAACGTGCAACGCCGG 165000 37 100.0 37 ..................................... AACAGCCGCCGGGTATCGGGTGCGCTATACACACTCG 165074 37 100.0 37 ..................................... ATCACTTCGCGCTCATAGAGCAGATAGAGCGCCTCGG 165148 37 100.0 36 ..................................... CCAACACGATCCGCGAGTTTGTCACGATCCCCGGCG 165221 37 100.0 39 ..................................... CGGCACGGTGACGGCAGCGCTGACGTTCGGGCCGGAAGT 165297 37 100.0 36 ..................................... TCATAATGCACTTCGTTGCCGTTCGAGTCCTTGATG 165370 37 100.0 36 ..................................... AGCAGGTAGCTTTGATCCGCCTGAATCCCCGCGGTG 165443 37 100.0 37 ..................................... CTCCCGACCGCGATATAGATGGGTGTTTCGGTTTTGA 165517 37 100.0 36 ..................................... ATCTGCGATGCGTGCGTGGCGAAGCTGGCCGGCGCA 165590 37 100.0 35 ..................................... CGAATGAGATCGAGTCCATGTCGCTCGCCGATCTC 165662 37 100.0 36 ..................................... CGCGCATCAGAATATCCTCGACTTGCACATACTGCA 165735 37 100.0 36 ..................................... ACGCGCCGGTCGATCGGCTTCGTGTAGCGGGTTGTC 165808 37 100.0 36 ..................................... TGATCGCATGTTCGCGAAGCCTGATGAACAGGTAAT 165881 37 100.0 37 ..................................... ATTCTATGCATGGGCGGTCAATCTTGACATCTGCATG 165955 37 100.0 37 ..................................... GCCAGCATCGCGCCTAGATAATTCAGCAGCATCGCGA 166029 37 100.0 37 ..................................... AACTTCAGGCGGCACACGAAGACCTTCGGGCGATCGA 166103 37 100.0 37 ..................................... GCCAGCGTCGCGCCTAGATAATTCAGCAGCATCGCGA 166177 37 97.3 37 .......................G............. AACTTCAGGCGGCACACGAAGACCTTCGGGCGATCGA 166251 37 94.6 36 ...........C....C.................... TTGCCCCTTGCCTGAACCGGCGTATGAGGCGCCCAA 166324 37 100.0 36 ..................................... TTGCCCCTTGCCTGAACCGGCGTATGAGTCGCCCAA 166397 37 100.0 36 ..................................... GTGCCCCTTGCCTGAACCGGCGTATGAGTCGCCCAA 166470 37 94.6 36 ......GC............................. GTGCCCCTTGCCTGAACCGGCGTATGAGTCGCCCAA 166543 37 94.6 36 ......GC............................. GTGCCCCTTGCCTGAACCGGCGTATGAGTCGCCCAA 166616 37 100.0 36 ..................................... CCGGAGAGCGTGACCGGCACGGCGCAAAGCGGCGAA 166689 37 94.6 39 ............................A..A..... ACGGACGATTCCGCAACCATCGACACTGCCCTGGCCGAG 166765 37 94.6 39 ............................A..A..... ACGGACGATTCCGCAACCATCGACACTGCCCTGGCCGAG 166841 37 94.6 39 ............................A..A..... ACGGACGATTCCGCAACCATCGACACTGCCCTGGCCGAG 166917 37 100.0 39 ..................................... ACGGACGATTCCGCAACCATCGACACTGCCCTGGCCGAT 166993 37 100.0 38 ..................................... ACGACGCCGGAATCGGGAATCGCCAGTCAGCAGGAGAA 167068 37 100.0 37 ..................................... CTCGTTTGTGCTAGGATGGTTGCGACACGTTGTGTCA 167142 37 100.0 35 ..................................... CGCGGAAGATCCCCTTGATGTTCTCCCAGACCGAT 167214 37 100.0 36 ..................................... ACGCGTCGCGTGACTGGTCAGCCGGATGCTGGTGTG 167287 37 100.0 40 ..................................... TGACTCATATCCTCGTGGTATCACGGCGATATTATATCGC 167364 37 100.0 37 ..................................... GATGGAGGGGGTGGATCGCGTCGGCGTTCGTCCAGTC 167438 37 100.0 36 ..................................... CCTAGAACGCCGCGTCGAGCAACTGCAGTTGCCGGA 167511 37 100.0 38 ..................................... CAAAAGCCTGGCGCGAGATCTCCAGATTCCGGTGCTCG 167586 37 100.0 38 ..................................... TTAGACCTCCAGCGCGTTCCATTGATCGACTTTGTGCT 167661 37 100.0 37 ..................................... CGCGGGCAGTGCCGCCTGCCGGATCAAACAGATGCGG 167735 37 100.0 35 ..................................... TTGATCAGGGACACGAGACTCTGCCGGTATGCGTC 167807 37 100.0 39 ..................................... GATCGCCAACGGCGGGTCGATCACTGTCAAGGAAAAGTA 167883 37 100.0 37 ..................................... TTGTGAAGGCGGCGGGCGGGCGTGACGAACTCACGAA 167957 37 100.0 36 ..................................... AGCACAAAGCGCCAATATTCCGCCAGCCACGGCAGC 168030 37 100.0 38 ..................................... TGTCTGCGCGGCGAAGATCTCCGAGGTGCGACGCGGTG 168105 37 100.0 38 ..................................... TGACTGCGCGGCGAAGATCTCCGAGGTGCGACGCGGTG 168180 37 97.3 38 ..C.................................. TGACTGCGCGGCGAAGATCTCCGAGGTGCGACGCGGTG 168255 37 97.3 38 ..C.................................. TGACTGCGCGGCGAAGATCTCCGAGGTGCGACGCGGTG 168330 37 100.0 36 ..................................... AGCACAAAGCGCCAATATTCCGCCAGCCACGGCAGC 168403 37 100.0 38 ..................................... TGGCTGCGCGGCGAAGATCTCCGAGGTGCGACGCGGTG 168478 37 100.0 38 ..................................... TTGTGACGGCCTGATCATTCAGTTTGGCGTCGGTAATG 168553 37 100.0 37 ..................................... TGCCAGGCTGCGGTGTGACATTATCACGCAAATATTC 168627 37 100.0 36 ..................................... GGAGCGCACGGCGCATGGGGCCGGCACGCAATTGGA 168700 37 94.6 37 ......G........................G..... TCGGGCGATCTGACGCCGCAGCTATTTGCCGCCATCA 168774 37 91.9 37 .......................CG.C.......... TCGGGCGATCTGACGCCGCAGCTATTTGCCGCCATCA 168848 37 100.0 37 ..................................... TCGGGCGATCTGACGCCGCAGCAATTTGCCGCCATCA 168922 37 97.3 37 ...................................G. TCGGGCGATCTGACGCCGGAGCAATTTGCCGCCATCA 168996 37 97.3 36 .....................G............... GGAGCGCCCGGCGGATGGGGCCGGCACGCAATTGGA 169069 37 94.6 36 ......G.....................G........ GGAGCGCACGGCGCATGGGGCCGGCACGCAATTGGA 169142 37 100.0 36 ..................................... GGAGCGCACGGCGGATGGGGCCGGCACGAAATTGGA 169215 37 100.0 40 ..................................... CAGCCTGCACTTGTGCGGATTGTTGCGGAAATTTATGTCT 169292 37 100.0 36 ..................................... CAGCAGTAGGGTACGTTGCCCGCCTGGAGCAACTGT 169365 37 100.0 37 ..................................... CTGGACGCACAGTCCTGCCATCTGACAGCTCGATCAG 169439 37 100.0 39 ..................................... GACCGCCGGGCGCGCCAGGCGGGGGGAGGGTGGCGTGAT 169515 37 97.3 37 ..........................G.......... CCCGCACGCGTGGCCAAGGCCCGCGCCCCTATCAATT 169589 37 94.6 37 ..........C...............G.......... CCCGCACGCGTGGCCAAGGCCCGCGCCCCTATCAATT 169663 37 100.0 37 ..................................... CCCGCACGCATGGCCATGGCTCGCGCCCCTATCAATT 169737 37 100.0 39 ..................................... GACCGCCGGGCGCGACAGGCGGGGGGAGGGTGTCGTGAT 169813 37 100.0 38 ..................................... TGGGACTACCTGGCCGCTCCACCGACGACGCATAGGAC 169888 37 100.0 35 ..................................... TTGGCGTCTCGCCACTAACAAACGCGGCCATGATT 169960 37 100.0 35 ..................................... GTGGCGTCTCGCCACTAACAAACGCGGCGATGATT 170032 37 97.3 35 ................G.................... GTGGCGTCTCGCCACTAACAAACGCGGCGATGATT 170104 37 97.3 35 ................G.................... GTGGCGTCTCGCCACTAACAAACGCGGCGATGATT 170176 37 100.0 37 ..................................... TCGATACCGGATTTTATCGTGCGGCGCTCATGGCGCT 170250 37 100.0 35 ..................................... CCACCAGCGCGCGTTGCGCTGCGGTGCGCTGCGGC 170322 37 100.0 37 ..................................... GGCCCACGAAATCGACGTACCAGGTATAGCCGGCTAG 170396 37 100.0 37 ..................................... GCGCCCAGATCGCCAGCGTTGCCACAATGCTCGGTAG 170470 37 94.6 37 ..........C.................G........ GGCCCACGAAAGCGACGTACCAGGTATAGCCGGCGAG 170544 37 94.6 37 ................G..................G. GCGCCCAGATCGCCAGCGTTGCCACAATGCTCGGTAG 170618 37 100.0 38 ..................................... CTGCAAGCGCCGCAGTATTGGAAAGAGGGTCAATGGGT 170693 37 100.0 38 ..................................... TCGCCCGCGGCAAACTCCCAAATAACACCCGGCCCCTG 170768 37 100.0 37 ..................................... GCGCCCAGATCGCCAGCGTTGCCACAATGCTCGGTAG 170842 37 100.0 40 ..................................... CGTCACGGTGTCGGCTGCCGGATCGGTGACGTTCAGCACG 170919 37 100.0 38 ..................................... CCACACGAATTCGATTGATGCCGCCTGGCGCTTCGGGG 170994 37 100.0 43 ..................................... GGCAGAGGGCGCTGACGATGGGGCAGCAAGCGGGGATCGGGGA 171074 37 91.9 43 ..................C..A......A........ TGCAGATGGCGCTGACGAGGGGGCAGCAAGCGGGGATCGGGGA 171154 37 91.9 43 ..................C..A......A........ TGCAGATGGCGCTGACGAGGGGGCAGCAAGCGGGGATCGGGGA 171234 37 100.0 43 ..................................... TGCAGATGGCGCTGACGATGGGGCAGCAAGCGGGGATCTGGGA 171314 37 100.0 40 ..................................... TTTCGTTAACAGGCAAATATCAGGCAGTTCACAGTGGGTG 171391 37 97.3 39 ...................................T. AAAACAGCATATTGTCGTATAGTTGGGGGCACGACCATG 171467 37 97.3 43 ..................C.................. TGCAGATGCCGCTGACGATGGGGCAGCAAGCGGGGAACTGGGA 171547 37 97.3 43 ..................C.................. TGCAGATGCCGCTGACGATGGGGCAGCAAGCGGGGAACTGGGA 171627 37 100.0 35 ..................................... AAAACCTGCCATTCCCCGCGATATAAATGTTTTTG 171699 37 100.0 37 ..................................... CGCTGGACATGAGTGAGTATATCGCGACGGAGTTGGC 171773 37 100.0 39 ..................................... AAAACAGCATATTGTCGTATAGTTGGGGGCACGACCATG 171849 37 100.0 38 ..................................... CGGCAAAAAATTCTCGAACGCGCGTCCAACCTGTCGTA 171924 37 100.0 40 ..................................... TTTGAATTACGACCGCACAGAGCTTTGCTGAATGATGCAA 172001 37 100.0 35 ..................................... GCGGCTATTGATCGAGGGCGCTTGGAGTCAGTTGC 172073 37 91.9 40 ..................C.G..C............. TTTGACTTGCGACCGCACAGAGCTTTGCTGCGTGATGCAA 172150 37 94.6 35 ..........C..........G............... TCGGCTATTGAGCGAGGGCGCTTGGATTCAGTTGC 172222 37 100.0 35 ..................................... TCGGCTATTGATCGAGGGCGCTTGGATTCAGTTGC 172294 37 100.0 40 ..................................... AAGTGCCGGCGATCACGCCATACGATCCTATTGAACCGTT 172371 37 100.0 37 ..................................... CGTCATTAATTGCACGCCGCGATCTGGAACGCTACTA 172445 37 100.0 36 ..................................... GGCTTATTGTGGGTGACCAGGTGGTAAATTTACCAG 172518 37 100.0 36 ..................................... ATGTGTTGCGCACGTGCAATAAATAATTCACCATAG 172591 37 100.0 40 ..................................... TACGGCAGCGGACTCTCATAGCCGGCCGGCACCTGGTAGG 172668 37 100.0 37 ..................................... GACGGGCGCGCGCCTGTTTGCTCCCGTCGGGTAGAAA 172742 37 100.0 36 ..................................... CCAGCCCGCCAGCGGCCGCCCGGCGACTCTATACGC 172815 37 100.0 37 ..................................... GACGGGCGCGCGCCTGTTTGCTCCCGTCGGGTAGACA 172889 37 94.6 36 ......CC............................. CCAGCCCGCCCGCGGCCGCCCGGCGACTCTATACGC 172962 37 97.3 39 ..........C.......................... GGCCATACACGCGTGAGTTGTGTTCCCAGATTACGAGAG 173038 37 100.0 39 ..................................... GGCCATACACGCGTGATTTGTGTTCCCAGATTACGAGAG 173114 37 100.0 37 ..................................... GCCACCATCACGCCAGAGACGTTTTGGGCCGAAGAGG 173188 37 100.0 38 ..................................... CTCGTCAGATCCGCCGCCGTTTCTGAGAGGTGTTCCCA 173263 37 100.0 35 ..................................... ACGATTGCAGGCTGTGGATACGACGCTAAATCAGT C [173299] 173336 37 100.0 38 ..................................... CGTGGGACGCCCGCCTTGTGTCTGAAGGCGATGGCGAG 173411 37 100.0 38 ..................................... CTCGTCAGATCCGCCGCCGTTTCTGAGAGGTGTTCCCA 173486 37 100.0 35 ..................................... ACGATTGCAGGCTGTGGATACGACGCTAAATCAGT C [173522] 173559 37 100.0 37 ..................................... CGTGTCCGAAGGCGATGGCGAACCCCTCTAGGTAAAA 173633 37 100.0 41 ..................................... AAGGCAACATTATACCGACCCTGTTGATTAAATCGACACAG 173711 37 100.0 40 ..................................... AACCATGCGTAAAATGACGTTAGCGCAGGCCATGCTGCGT 173788 37 100.0 37 ..................................... GGCGCAGAGAGGGCTGGGCCGCCTGGCGGCTCGTGCC 173862 37 89.2 40 .................G...............CCT. AACCATGCGTAAAAGGACGTTAGCGCAGGCCATGCTGCGG 173939 37 89.2 40 .................G...............CCT. AACCATGCGTAAAAGGACGTTAGCGCAGGCCATGCTGCGG 174016 37 100.0 39 ..................................... AGCGGGCGAAACGCCGTCGCACCTAAAATGCTTAATTGA 174092 37 100.0 37 ..................................... CGTTAACAGCATGTTTTCGCGTGTTGAAATTACCAGG 174166 37 100.0 38 ..................................... TCAGTTTGAATGCGCACCGCCACAGGTGCTGCTGTCGG 174241 37 100.0 41 ..................................... CGTTGCCGGACTGGTGTATGCGTACAAAAACAGTGAAACAT 174319 37 100.0 36 ..................................... CCTAGAGATCGACGAACAAGATCTTATCGTACGGCG 174392 37 100.0 37 ..................................... GGCGCAGATAGGGCTGCGCCGCCTGGCGGCTCGTGCC 174466 37 94.6 36 ..................C....C............. CCTAGAGATCGACGAACAAGTTCTTATCGTACGGCG 174539 37 100.0 37 ..................................... GGCGCAGATAGGGCTGCGCCGCCTGGCGGCTCGTGCC 174613 37 100.0 39 ..................................... TTATACACCGTAATGGTGTCGGTGTCGGTGTCAATTGTG 174689 37 100.0 36 ..................................... AGCAACCAACGCAGCCAACCGCTCACGCGGCGTCAG C [174725] 174763 37 100.0 38 ..................................... ATTAACAAACATGTGGCAGAATTATGGAGTATTTTAAA 174838 37 100.0 39 ..................................... ATGTTGCATTTAACCGGTTCCAAGGGCAGTGGCAAAACG 174914 37 100.0 44 ..................................... CGGCGCCTAACACGTCATGATGCAGATAATCTGCCAACGTCGTA 174995 37 100.0 39 ..................................... TGCCGTAATGCTCGGCGGCATACTGGAGCGCCTCCTCAG 175071 37 100.0 37 ..................................... TGGGGTCGGGCAGCGTCTCCTCGACCTCGACCGCAAT 175145 37 100.0 40 ..................................... ATCCCGGTCTCAAGTGCCTGCTGCTCCGCAAAGTCGGCAA 175222 37 100.0 38 ..................................... GGGCATCGTGCTGCATACCGGTGAGGGGACGCGTCAGA 175297 37 100.0 39 ..................................... AAGACCTGTATGATCAGGCGCCGGCTTCTTCGGTGACGG 175373 37 100.0 38 ..................................... TGAAATCCTGGAGAAAGTCCCAGTCATCGAGAAATTGC 175448 37 100.0 36 ..................................... GCGTGCCTATGCGGTAGCGCAGGGGATCTTAAATGC C [175484] 175522 37 100.0 39 ..................................... ATTGAATGGATGCGAGCGCTTCGGTTCCGGCTTTGATCG 175598 37 100.0 35 ..................................... ATCAGGATGGCGCTGTAGGTCTTGCCGCTGCCGGA 175670 37 100.0 38 ..................................... TGCTGAGTGTCATTGATGTGACGGCCGGGCAGCAGGTT 175745 37 100.0 38 ..................................... AGCGCGACGCCGGCCTCACACCACGATCGATCGAGACG 175820 37 100.0 41 ..................................... GGCCGAAGCACTGCCATACATCCAGTATGGCAACTGGAGCG 175898 37 100.0 38 ..................................... GGCGACCGGTTCCTGCCAATGCTTATCGCCAAACAGTC 175973 37 100.0 38 ..................................... ATCGCCGAGGACGCGACGATGCAGGAGATCGAGGACGA 176048 37 100.0 38 ..................................... GGCGCCCGGTTCCTGCCAATGCTTATCGCCAAACAGTC 176123 37 94.6 38 ................G....C............... GGCGCCCGGTTCCTGCCAATGCTTATCGCCAAACAGTC 176198 37 94.6 38 ................G....C............... GGCGCCCGGTTCCTGCCAATGCTTATCGCCAAACAGTC 176273 37 100.0 39 ..................................... TTATCACTGGCGCGATCACGGCGTTACAGGATGCGCTCT 176349 37 100.0 36 ..................................... TAGAACAAATGGCGTCCGACAGCCGACCCGTGATAC 176422 37 100.0 35 ..................................... GCGATAGGGGGACGCCACCGCCAGACGGGCATGGG 176494 37 89.2 36 ......GGG.........................C.. TAGAACAAATGGCGTACGACAGCCGACCCGCGATAC 176567 37 94.6 36 ................G....C............... ACGACGACCGCGCAGCTGCCCTGGATGCCTGGCATG C [176603] 176641 37 100.0 36 ..................................... ACGACGACCTTGTAGCTGCCCTGGATGCCTGGCATG C [176677] 176715 37 100.0 39 ..................................... GGAAAAACGCGCAATATGGTACAATTGAGCAATATTCTC 176791 37 100.0 36 ..................................... CCGCGTCGCGTGACTGGTCAGCCGGATGCTGGTGTG 176864 37 100.0 35 ..................................... GCGATAGGTGTACGTCACCGCCAGACGGGCATGGG 176936 37 100.0 35 ..................................... GGAATGAGATCGAGTCCATGTCGCTCGCCGATCTA 177008 37 100.0 35 ..................................... CCAATTAATCTGGCAGATTGTGCCATCTGCCAGAC 177080 37 100.0 39 ..................................... GTAAAAACGCGCAATATGGTACAATTGAGCAATATTCTC 177156 37 97.3 39 .....C............................... GTAAAAACGCGCAATATGGTACAATTGAGCAATATTCTC 177232 37 97.3 39 .....C............................... GTAAAAACGCGCAATATGGTACAATTGAGCAATATTCTC 177308 37 100.0 40 ..................................... ACAATCACAGCGCTCGTTCCTATGATGTAGATGAATTTTT 177385 37 100.0 37 ..................................... GCATCCGGCCTCTCTCGCTGGAGTATCCTCTGAGGGG C [177421] 177460 37 100.0 38 ..................................... AGTGGGACGCCCGCCTTGTGTCTGAAGGCGATGGCGAA 177535 37 100.0 36 ..................................... GCAGAATATCCTGCTCCGTCTGTTCTGAGTCGTACT 177608 37 100.0 36 ..................................... CCACGTGCATGACTAGGTTAGATCCCCGGCGTATGA 177681 37 100.0 37 ..................................... GGACGGGCGCGCTGTTGTCTGTGTGGCGGGCTGTATG 177755 37 100.0 35 ..................................... AGCTTGAGCGAGCGGGCTGTGCGTGATATACTGCT 177827 37 100.0 36 ..................................... CGGCGGCATCGGCCTCGATGTCACCACCGTCGAACA 177900 37 100.0 37 ..................................... GGACGCGCGCGCTGTTGTCTGTGCGGCGGGCGGTATG 177974 37 91.9 36 ................G................G.G. CGGCGGCACCGGCCTCGATGTCACCACCGTCGAACA 178047 37 91.9 36 ................G................G.G. CGGCGGCACCGGCCTCGATGTCACCACCGTCGAACA 178120 37 100.0 40 ..................................... ACTCATCGACCACGGCTACCTCCGCACCCCCAGCCCGCCG 178197 37 100.0 36 ..................................... CGGCGGCCTCGGCCTCGATGTCACCACCGTCGAACA 178270 37 91.9 40 ........................T.T..C....... ACCCATCGACCACGGCTACCTCCGCACCCCCAGCCCGCCG 178347 37 97.3 35 .......................C............. ATAGATACGCACGCGCTCTTCGCCATCCAAAATTG C [178383] 178420 37 100.0 35 ..................................... ATAGATACGCACGCGCTCTTCGCCATCCAAAATTG C [178456] 178493 37 100.0 37 ..................................... CCGCCAGCACCAACGGACGTGGATGAGGAGCAGGGTT 178567 37 97.3 37 ...................................G. CTTGCACAAGCAGAGTGGTATGTCGACGAATCAGGGA 178641 37 97.3 35 ...............................G..... ATAGATACGCACGCGCTCTTCGCCATCCAAAATTG C [178677] 178714 37 94.6 35 .....C.........................G..... ATAGATACGCACGCGCTCTTCGCCATCCAAAATTG C [178750] 178787 37 100.0 37 ..................................... CTTGCACAAGCAGAGTGGTATGTCGATGAATCAGGGA 178861 37 100.0 39 ..................................... TCTGATCGGCCGCGCGTGTTGCGGCGGTTTTCGTTCGAT 178937 37 100.0 37 ..................................... ACATGGCCGATAACAGCTACCTGCTGGCGCTGGCGGA 179011 37 100.0 39 ..................................... TCTGATCGGCCGCGCGTGTTGCGGCGGTTTTCGTTCGAT 179087 37 100.0 37 ..................................... ACATGGCCGATAACAGCTACCTGCTGGCGCTGGCGGA 179161 37 100.0 39 ..................................... TCTGATCGGCCGCGCGTGTTGCGGCGGTTTTCGTTCGAT 179237 37 100.0 37 ..................................... ACATGGCCGATAACAGCTACCTGCTGGCGCTGGCGGA 179311 37 100.0 39 ..................................... TCTGATCGGCCGCGCGTGTTGCGGCGGTTTTCGTTCGAT 179387 37 100.0 37 ..................................... ACATGGCCGATAACAGCTACCTGCTGGCGCTGGCGGA 179461 37 100.0 38 ..................................... TTCTGCTTCGCCGCGCGCTCCATTGCGACCGTCTCAGG 179536 37 97.3 36 A.................................... AGGCTAAAGCGATGCGGCCAGGCATTGGCTGATGGT 179609 37 100.0 38 ..................................... TTCTGCTTCGCCGCGCGCTCCATTGCGACCGTCTCCGG 179684 37 97.3 38 C.................................... TTCTGCTTCGCCGCGCGCTCCATTGCGACCGTCTCCGG 179759 37 97.3 35 C.................................... AGATGTTCGTCACGAACATGTTGATCGCGTCGAGC 179831 37 100.0 35 ..................................... ATATGTTCGTCACGAACATGTTGATCGCGTCGAGC 179903 37 100.0 38 ..................................... CTTTTCGCGATCCTCGTCCGATCCACACAGACTATCTA 179978 37 91.9 37 .....G.C.............G............... AAACGGGGCATTTAGTAAACCGCCAAGCATTCTTCTT 180052 37 94.6 35 ........................C.G.......... ATATGTTCGTCACGAACATGTGGATCGCGTCGAGC 180124 37 91.9 37 ......GC....................G........ AAGCGGGGCAGTAAGTAAACCGCCAAGCATTCTTCTT 180198 37 100.0 38 ..................................... CTTTTCTCGATCCTCGTCCGATCCACACAGACTATCTA 180273 37 100.0 37 ..................................... AAGCGGGGCATTTAGTAAACCGCCAAGCATTTTTCTT 180347 37 100.0 38 ..................................... CGCAAGACCCGCCGCGCCACGCCCGACTGATCGCTGCG 180422 37 100.0 38 ..................................... CGCAAGACCCGCCGCGCCGCGCCCGACTGATCGCTGCG 180497 37 97.3 39 ..................C.................. ACTCCCAACGAAAGGAGCAAGCACAAGCTCACCCTCGTG 180573 37 97.3 39 ...................................C. ACTCCCAACGAAAGGATCAAGCACAAGCTCACCCTCGTG 180649 37 100.0 39 ..................................... ACTCCCAACGAAAGGATCAAGCACAAGCTCACCCTCGTG 180725 37 100.0 38 ..................................... CGCAAGACCCGCCGCGCCACGCCCGACTGATCGCTGCG 180800 37 100.0 37 ..................................... CTCATCGCCGTGCTGCTCGATGGCAAGGCGGCAACAA 180874 37 91.9 0 ...T.................GA.............. | ========== ====== ====== ====== ===================================== ============================================ ================== 224 37 98.7 37 GGAGCATTTGAACGACTCAGATGAAGAGTACTGAAAC # Left flank : TGCGCGTCATCGACGATCGCACCACGTGGGTCGAGCTACAAAGCTACTCGACTCGCCAGCAGCGGGCGACTCCAACCGGCGGGTTCGTCGGGAGCGTATCGTTCGCAGGCGATTTCGAACCCGCGCTGCCGTTCCTGGTGTGGGGGGAACTGACCCACGTGGGCAAAGATGCGGTCAAGGGTAACGGATGGTTCACGCTCCGTCCCGAAGTCGTCAAAAAAGCGACGTTGTAGAACGCCGACTCGCAAAAGGTCTCCTTTCAAGCTACTCATAGCTCAAGGGAGCAAGGACCATGTGCCCTGCGCTACGCCAAGCGCAGCCTGGACCGCGCCCGCAACGCGTTCGCAAAACCCTGGCGTTTTCGATCAAAAATCGAGTTGCGAGGCATGGCGTATCCATGATATGCTTGGTACGAAAATCGAATGTGTTGGAGCCATCAGGCGCCGCAGAAATGGCACCTCAGGTCATAGATCATAGGAGATTATACCCTCGAGAAATCA # Right flank : CCCGGAACCCTGCTGGTGATCGGTTGTATGTGTCAGTTCAGTGCCCGACGCGGATGCGGCGCTGATACCATTGCAGCAGCAGCGACAATACCAATGTCATCACCAGGTAGAAAAAGGTGAGCGTGAAATAGGTTTCCGTGAAACGGAACGATGTGCTGGCGTAAAGGCGCGAGACTTGGGTCAGATCGCGTACGCCGAGCACAGAGACCAGCGACGAATCCTTGAGCAAGGCGATGAAATCGTTGCCGAGCGCCGGAAGAACATTGCGGATCGCCTGCGGCAGAATTACTAGCCGCATCGCCTGGTAATGCGTCATGCCCAACGAGCGGGCCGCTTCCATCTGCCCTCGTGGGATCGCTTCGATGCCGGCGCGAAAGACCTCGGCGAGAAATGCGCCATAGATCATCGCGAGCGCGATAATCGCGCGCGTTGAGAGCGATACGGCGTTGTTGTTGAGACCAAAGAGTGAGGCGGCTGCCGGAACGACCACAAATGCAATG # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAGCATTTGAACGACTCAGATGAAGAGTACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.80,-2.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [18-36] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //