Array 1 5031-6035 **** Predicted by CRISPRDetect 2.4 *** >NZ_UDAQ01000018.1 Escherichia coli strain VREC0605, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5031 29 100.0 32 ............................. GGACAATGTGAAAAGCTTAATATTCATTACAT 5092 29 100.0 32 ............................. CGACGTTTTCTAATATCACCCAGCAATCAATT 5153 29 100.0 32 ............................. ATTTCATCAAAGCATTAAGGGATGGAATAAAG 5214 29 100.0 32 ............................. TCATGAATATGGGGAAAACGAACAATCTGTTT 5275 29 100.0 32 ............................. ATGACCATTGGTGAACGCATCCGCTTTCGCCG 5336 29 100.0 32 ............................. CCGACGTGGGGATTTACTGCCACGCATAAAAA 5397 29 100.0 32 ............................. TACAGTTTCCATAAATTCACCTCGTTTATATA 5458 29 100.0 32 ............................. ATCGGACGATGGCGATCGCAATCGCGCGGGAA 5519 29 100.0 32 ............................. AGGACGAAACGACCGGAAAACTGGCGACGGGC 5580 29 100.0 32 ............................. AACCTTGTCGGGTCGCCCGTGCGTCATGATGA 5641 29 100.0 32 ............................. AGTTCCCACAAACCTGGGTGCATCTCGCGTTC 5702 29 100.0 32 ............................. ACTGCAAAGTTCTTCACGCTGGTTTTTATGCA 5763 29 100.0 32 ............................. CCAGCCGAAACAACGCCAGCAAAATCGACCGC 5824 29 100.0 32 ............................. GGATATAGAGCGGGTACTCGAGCGAAGCGGGG 5885 29 100.0 32 ............................. CCAGGACAGGCCGTGACGGTTGCCATTGAGTC 5946 29 100.0 32 ............................. TTTTTGTTCTCTTCAAAACGCCGAACAACCAA 6007 29 93.1 0 ............T.....A.......... | ========== ====== ====== ====== ============================= ================================ ================== 17 29 99.6 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGTGCTTGCTGCTGGAGAAATACAACCGCCGGCCCCACCTGAAGATGCACAGCCTGTTGCCATTCCGCTTCCCGTTTCTCTGGGAGATGCCGGACATCGGAGTAGCTGAGATGAGTATGTTGGTCGTGGTCACTGAAAATGTACCTCCGCGCTTACGAGGCAGATTAGCCATCTGGTTGTTGGAGGTACGTGCAGGGGTATATGTAGGTGATGTATCCGCAAAAATTCGTGAAATGATCTGGGAACAAATAGCTGGACTGGCGGAAGAAGGCAATGTAGTGATGGCATGGGCAACGAATACGGAATCGGGATTTGAGTTCCAGACATTTGGGGTAAACAGGCGTACCCCGGTAGATTTGGATGGTTTAAGGTTGGTATCTTTTTTACCTGTTTGAAAACAAAGAATTAGCTGATCTTTAATAATAAGGAAATGTTACATTAAGGTTGGTGGGTTGTTTTTATGGGAAAAAATGCTTTAAGAACAAATGTATACTTTTAGA # Right flank : GGACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCCAACTCCCATTTTCATACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCTGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAATTTGTTGCTTCTACCGAAAGTACGGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGTGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCACTGTTGAAATACAATTTATCGCCAACA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //