Array 1 66200-67127 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTET01000009.1 Gilliamella sp. Lep-s5 NODE_9_length_90345_cov_152.242145, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 66200 28 100.0 32 ............................ CATGATTTGGGGCAATGAACCCTTTGTCAACG 66260 28 100.0 32 ............................ AATTGAGACCTGACTCCGATGCTCCAATTTGA 66320 28 96.4 32 .......A.................... ATGTCATTACCGAAATTACGTAAGTATTCGAT 66380 28 100.0 32 ............................ ATTTTACCGCCATTAAATATTATTGAAAGGGT 66440 28 100.0 32 ............................ AATGTATCCATCGATACCGCCACTTTGATTTA 66500 28 100.0 32 ............................ ATGGGAGTCTCACCCTCGTCGAATGTTACGAC 66560 28 100.0 32 ............................ TGAATGTCAAGGTGTTTATAAAAATTTTATTT 66620 28 100.0 32 ............................ TGTTGATGCTTGAGTTAGCAAAACTTCAAATC 66680 28 100.0 32 ............................ GATTTGTGATTGTTACATGCTGAACATTGCTT 66740 28 100.0 32 ............................ ACGTTGGCAACCGTATGCACAAAGTTATATTG 66800 28 100.0 32 ............................ ATCGCGCACCGTTGTACATTCTTGCTTCAGAG 66860 28 96.4 32 .........T.................. GTGCTGTGAGTTGATGCTAGGTAATTGTGATA 66920 28 100.0 32 ............................ TGCAGAGTGTTTTGCAACCCATTCATTTGTAT 66980 28 100.0 32 ............................ TACCCAATGACGATAACACCAAGCTCGTGTAA 67040 28 100.0 32 ............................ TGTTGATAGGGCACCATAACCAACACCGCCTA 67100 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 16 28 99.6 32 CTTCAATGCCGTGTAGGCAGTTTAGAAA # Left flank : AAAGCAGATATACAGCAAAAATCATCGATTAGTGATTATGCTTTATTGATGCCTATCACTGTAGTACCGACGACGATAAAAGGCTATTTACGTTTTAGCCGTGTCAATCCTAAAGGTCAGAGTGCGTTAAGGCGTGCCGAAAAAAGATTAACAGCACAAGGTAAATGGACACCTGAAGTGAAAAATAAAATGATTGAAAAGTGGGGAAGTGTTCATTTGCAATACCCACATCTTCATTTGAATAGTAAAAGTACAGGGCAAAAATTTATTTTGTGGATAAAGCAAGAAAAATGCCTAGAGCCAGTGCAAGGCACATTTAATAGCTATGGATTAAGCCAAACAGCCACTGTTCCTGATTTTTAAATTTCTAACCCTTTTTTTGGGGATGATTTTAACATATTGATTATTATTGATATTAAAATAGACTCAAAAAAAGGGTAGAAATTGGGTAAAGTGCAGTATGCTCTTTTACAATAAGGCTCTATTGAGATAAAATTCTA # Right flank : ATTGTTCAGATTTAAATAGCATCATTGTTGTAACTTCAATAATCATTAAGTCCCACAATATAACCCTTTCAATGTGGTTTAACCGTATTATAAAAGTGAATAAATCGCTTAAACTTTTGTTTTCTTTTTTTGAATATTTGTTGATTATGCTAGATTTCAATTAAAGTCTGTATCGCTTTTTTTGGCTTTTTTAATCTTGAAACGGTATAGAATCCTGAATATTTTTTACAAAAATATAACCTAAAAAGTAAACAGTTCAACTTTAGCTAAATCAGTGATGGTTAGCTTTGTTTATGATATCAGCGCCATATCTCTTGTATGTGATATGGCGTTAGTTTGCTTTTTTATGGATATTTATTATCGTAGTGTCTTAAATTACTGTAAAAAAGAAATAATTACTACACATTATTAGTATAATAAGATCACTATTCAGCCCCAATTTGCGTACTCACTTTTATCTCTCTGTTATCGGTAATTTCTAAATTCGATAGCACCGCTAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCAATGCCGTGTAGGCAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched CTTCACTGCCGTGTAGGCAGCTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.70,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 2872-3319 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTET01000018.1 Gilliamella sp. Lep-s5 NODE_18_length_43358_cov_140.045132, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2872 28 100.0 32 ............................ ACACTTCAAAGTCGTCATCAGTCGGTAATGTG 2932 28 100.0 32 ............................ AACGGCATGCCTGTACTTGTCGCTTATCACTT 2992 28 100.0 32 ............................ TCACGCAGGCGGATTTTGCATAACCGTTCCAA 3052 28 100.0 32 ............................ TTTCTCTCGTAAAGTTTTTAATGCACGATAGA 3112 28 100.0 32 ............................ TTTTAGGCTATGCGCGTATGCAATAACCATAC 3172 28 100.0 32 ............................ TGAAAAATTAATAATCACAAAAATAACCAAAA 3232 28 100.0 32 ............................ CTGTTAACGCTTCACCTGCTTTTACTAAAACA 3292 28 96.4 0 ..................A......... | ========== ====== ====== ====== ============================ ================================ ================== 8 28 99.5 32 GTTCACCGCCGAGTAGGCGGTTTAGAAA # Left flank : TTTAAGTTTGCGATTTTCTGCCTCAAGCTCTTTTAAGCGTTTGATATCTGAGCTTTCCATTCCGCCGTATTTTTCTCGCCATTTATAGAAAGTTGAATTACCCATGCCATATTTACGGCAAAGCTCTTTAACGGCAATACCTGCTTCTGCTTCTTTTAATATCGATACAATTTGGTGTTCAGTTATTTTTTTCATAATTAAATCCCCTTTACTTTTATCATAGAGAATTTTCTACTTTTTTGCTGTACTATTTTAGGGGGGTGGTGTTACATAATATTGATTATCTAAATTGAAAGCTCTCGTTATATAAATAGTTTATAAAGGTGCGCTCAGATTTGATCATTCCTATTTTGAATTCAAAATTCTACAAAACCCTTTTTTTTGCTTGCTTGTTAATATATTGAAAAATATATATTAATTTTAATTCTAGAAAAAAGGGTTATTTTTTGAAAAATAACTAAAATTTATTTAAAACAAAAGGCTATGTCTGATATAATCTA # Right flank : ATTAACGCACTCTATTTTGTGCCGCTAATTCATTAATAGCCGCTTCTGCCAAAAAATTACTCCGATCTTTATAAAAAGAGTTCGGTGCTTTAACTGCGTTATCTATTCTATCGATAAGAATATCGGGTAATGTGATATTAATTCTTTTTTGTTTACCAACAAATGATGACAAATCAACATCAATAATGACCCATGTATCGCAATGAGCATACTCATCGTTATTTTTATACGAAACATGATCGTTGTGAATATCTTTGACATCATAATCGCCTGATTCAATCATATCTTGAACAGTTAACAAAATAGCTTCAGTCGCCATTGCTGGGATATCGCTTTCTTTGTCGGCGGCAGAATAACAACTATATTTTTCATTACATAACGCAGGCACGACAATGCCGTAAGCTGTATTGCTATCGTTCGGTGTTTCAATGCCAAGAGTAAAAAACATAATACCTCCAAAGGTGGCGGGCTATAAAAGCCCCGCCGATTTTTTGATTGAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCGAGTAGGCGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGAGTAGGCAGCTTAGAAA with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 133669-132020 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTET01000004.1 Gilliamella sp. Lep-s5 NODE_4_length_160460_cov_130.312274, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 133668 28 100.0 32 ............................ CAGCTAACATATTAACGGTTGGTATTGGCTCT 133608 28 100.0 32 ............................ ACTGTCCTCAAGGTCTCAATCACATGCTCGAC 133548 28 100.0 32 ............................ TAGTACATGTTTTTTATCAGTGATACAGTTGA 133488 28 100.0 32 ............................ TGCATCACTAACACAGCCAAATAACGAGCCTC 133428 28 100.0 32 ............................ ATGATTAACTCACCAGAAACGAGCTTTTCTTT 133368 28 100.0 32 ............................ TATAAGGGGGTGGGAGCACGCTCCCACTTAAA 133308 28 100.0 32 ............................ GACAAACAAAGCAGTTGAGCGGTGGAGCAAAC 133248 28 100.0 32 ............................ TAATTAGTGGCTTTTTTATGTAAATTAATTGT 133188 28 100.0 32 ............................ ATTTCATGCTTGATTTTTGCCGTATTCGCTCC 133128 28 100.0 32 ............................ ATATTTCAAATCAATTGAACTTGCAGCGGGAC 133068 28 100.0 32 ............................ AAGAAAGAGGGGTAATTGATGAGAATAACGTC 133008 28 100.0 32 ............................ GTAATTAAAATAGCTTTCTCAATTGCTTTATT 132948 28 100.0 32 ............................ GCATGTGGGCAACATTAACGGATATATCGAAA 132888 28 100.0 32 ............................ TGATTTCGCACTAAAATTATTTGGAAGAAGAT 132828 28 100.0 32 ............................ TCGCCGGTCCAATAATCAAGACCAATAGGATC 132768 28 100.0 33 ............................ TTACTGGCATTAGAATTGCTATTGCTTCTTGAT 132707 28 100.0 32 ............................ TGAACCGCCGAATACGTCAACTATTGTCCAAC 132647 28 100.0 32 ............................ AATAAAAGACCCAGACAACATTAATTGGACCG 132587 28 100.0 32 ............................ CTCGACATCTTGAGCATTAAAAACATAATACG 132527 28 100.0 32 ............................ ATATAAGGGTAGGCGTTATAAATTGGGTGCTA 132467 28 100.0 32 ............................ ATTTCCGCTTTAATCTGCTTTGCCACCATTTG 132407 28 100.0 32 ............................ GCGGCACGTCGGCGAGTGTTACGCTGTGTATA 132347 28 100.0 32 ............................ CACAGGATGAAAAAAGAGATTTTCTAAATCAT 132287 28 100.0 32 ............................ AAACCATTTTTATTTATTTTTTTAATATTACT 132227 28 100.0 32 ............................ TATCAACAACGTGCCCACCAGCAACACGTTGC 132167 28 100.0 32 ............................ AGTCTGATTATAAAAAAGCAGTACAAAATAAT 132107 28 100.0 32 ............................ GCAACAAATAGCTCATTTAATTCTACGCTATT 132047 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 28 28 100.0 32 GTTCACTGCCGTGTAGGCAGTTTAGAAA # Left flank : AACAAAGAACCAAGTACATACTGTTTAAAATCCCAACCATCGACCGCACCACGGACTTCGTCGGCAATTTTCCATATTTGGCGTTGTAGTTGATCGCGTTGTTGCGTTTCGGTAATTGATTTAGCGTTATTAGATGTCATATTTTTCAAAATTCCTAAATAAAAATAGGTGCTGCCTAATTAGAAGGTAACTAATTTTTACTTCCATATTAGCCATTTTATAGCTACCTGTTATAGGTGTTATAGCATAGCTGATTTGTTGTTATTTTTCCATCTGGGGCGTTTATTAAAAACTCAGCCAATGGGTATTTTAAATTTTAAACTTGGGAAATATTAAGAAATAACAAAGCAACAAAATCTAAAAACAAAAACCCTTTTTTTAGCTGTATTTTAAAAGTTAATAAAATCAATAGATTAAATTTATCTCTAAAAAAAGGGTTTTTAAAAACTAAATACCTATTTGCCTTTTTACATACTATATTGATAGTATATTAGCTTCTA # Right flank : AAAGGAAATCGTAGATCGATCCTTGTTAAAATATTAGACAGTATCTACCTATAACAGATAAGTGCCCTATCGGGCGTTAATTTTGTTTTTTATGTTTATTACTGCAATTTTTTAAATTACTGTAAAAAATGCGAGGGATTTCTATAGGTTTTAAATCCTGTTGTTATTATTTTAAAAAATGTTTTTATGTTATGAATTTCCATAATCAACGAGCTTTCCTGTTTTTTCATCACGCACACACCATTGCAAACGGTGATCCTCGCCAAAATATTAGACAGTGCCCACCTCTATCATTTTTTCGTTTTGGTAATATTGTTGTTCATATTGCTGCGGTGATACCTAGCCATTGGCTGAATGACGGCGTATCCGATTATAATAGATTTCAATATATTCAAATAGTGCTTTATTAGCCTGCTTCCTCGTTTTGTAGTAACAGTCATGAATAATATGTGTTTTGAGTGTATGAAAAAAACTCTCAACAACCGCATTATCAAAGCAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGTAGTTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 126593-126205 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTET01000006.1 Gilliamella sp. Lep-s5 NODE_6_length_142018_cov_142.152544, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 126592 28 100.0 32 ............................ AAATGACGCCTGTTATTGGTTGGTTACTGATT 126532 28 100.0 32 ............................ ATTGATTGCCATTTGCTCGTGATTTCCACGAA 126472 28 100.0 32 ............................ AATGCACGACATCGAGGATTGGTCTGAAAAAA 126412 28 100.0 32 ............................ AACATCAACAAAAAATAAACCAAGTTCGTTCA 126352 28 100.0 32 ............................ TGCGAGCAAAACCGCCTTTTTAGTACCATAAA 126292 28 100.0 32 ............................ GACAGCGTCATAGATGAATTTGACACCAATAT 126232 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================ ================== 7 28 99.5 32 GTTTACCGCCGCATAGGCGGTTTAGAAA # Left flank : TTATTATTTAATGGTGGTTGCATTAGTTGGATTAGTGACAGGTTTAAAAATGAAAGAAACCGCCAATAAACCGCTTCGAGGCGCAACACCTGCCGCATCGGATCGCTCAGAAGCCAAAGAGATTTTATCGGATCACTTTGATTCAATAGAGCAAAAAGTGGAAGATATCCAACAACAGATCGATACCTTACAAAAACAGCGTCAAGATTTGGTCGATCAGCATCCTAAATTAGATTGATCTTTTATTTTTGGGTTTTGTATGTTTTGTTTTAAAACATACAAAACTAAAGTTTAATAAAATCAATACGCTACCTGAGTGTTCTTTAACGGTAAAATTAGCACATCATAAAAATAACCAAAACGCTGCCAACCCTTTTTTTTATTGATAAATTAAAACAAATAAAAACAAAGCATTATAGAATAGCTACAAAAAAGGGTTTTTGAAAACAGAAATCCTATTTGCCTTTTGCTAAACAAGGTTTATAGTATATCGGCTTCTA # Right flank : TTCAGGCATCATTATTTAACAGTATAACGTTCATTTCTGTATAACTGCTTATTGAGTCTTAACTCGCTAAACAAGGACGATGAATATGTGTAATTGTGGCACAATGTAAAAAACAAAAGAGTTTGACAGTTAACTGTGAAAAAATTATTTGCACATTAACTTACTATGATATTGTCGACGATACTGTGTTGGTGTTCGCTCTGTCTTTTTTTTAAAAATCCGACAAAAATAATTACTATCTTTAAACCCCGATGCTAGAGCAATTTCTTTTATATTTAGATCATAATCCTTTAATAGCGATTTTGCATATTCTAAGCGAATATGATTTAGATATTCATTTAGCCCTATTTTTCCCTCGCTTTGAAATAGATGTGATAAGTAATTGGGTGAAATGTAAAACATATTATGATGCGGCGTGTGATAATTATTGTTTAAATTAATTGATAATTAACCACGCCGTTGATTTCTATATTTGAAAGTGAATTACAACTTTACGGCTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACCGCCGCATAGGCGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: R [matched GTTTACTGCCGCATAGGCAGCTTAGAAA with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.50,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //