Array 1 841117-844914 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011564.1 Halanaeroarchaeum sulfurireducens strain M27-SA2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 841117 30 100.0 35 .............................. ACCAACACCTGGACGTCCTGATTGAGTGGAAAAAT 841182 30 96.7 35 A............................. CCATGCCGGATTGTTCATTATCCACCACTGCCCTA G [841183] 841248 30 100.0 33 .............................. GTTCAACAGCGATGGAACGAAGGGACGCATCCG 841311 30 100.0 36 .............................. GGTTTCAGAAAATGGCTCCTATCTAGCTCAATGCGG 841377 30 100.0 37 .............................. ACGGTGCGTGCGGTCTGGAATGAGGTACTATTTGCAG 841444 30 96.7 36 ..............G............... AGCCCAAACATATCGAGGATGCATGAAAAATCGGCG 841510 30 100.0 36 .............................. GTCCGGTACGCGGATACCCGAGCAAAGAACCGGGCG 841576 30 100.0 42 .............................. CTGACGCACCTCGGGGATAAGGTCCCGGACGGTCGAAGCCGA 841648 30 100.0 36 .............................. AGGTGATCGTACTTGACCTCGTGTTCGTCGGAGCAG 841714 30 100.0 35 .............................. CTTTGATGACGTTCACGTACTCGTCGTTCTTGTCC 841779 30 100.0 35 .............................. ACGTCATCCGACCACGGGGACGCCTCGCGGTCCCC 841844 30 100.0 37 .............................. CGCGTTCTCACCCGTGCCAACCGCAAGATTTTTGGCG 841911 30 100.0 37 .............................. CAACTCTTGCTCCAACTCCAACTCTTGATCCAACCGC 841978 30 100.0 36 .............................. ACCACGCGTTAGCCTAACGGTCATAATGCCTGCAGG 842044 30 100.0 36 .............................. TCGGGGTACAGCCGCCTCAGCGCTGTCTCCGAGTAG 842110 30 100.0 37 .............................. GAGGACGAGGGAGAGACGTACAACTGCGGCGATTGTG 842177 30 100.0 36 .............................. GGCTGGCAAGCGCCCTACCAGGCCCAAGAGCGGTTC 842243 30 100.0 35 .............................. TTCACGCTCGCCGCCACCTGAGGAAATCTACGAAT 842308 30 100.0 37 .............................. CGCATTGTCTAGCATCCAGCAACAGCAGGCGGAGGAA 842375 30 100.0 36 .............................. ATACCAGATTATCAGGTTGTCAACGAAATCGGGCGC 842441 30 100.0 36 .............................. TGCGTCAGAACAGAAGGTCTACGATGGGTCGGTGTG 842507 30 100.0 37 .............................. CGACCCCGCACGACCACAATCTTACTTACTAACATGG 842574 30 100.0 35 .............................. GAGGGTGAGACGGTCGAGGTTCCGACGACCTTCGA 842639 30 100.0 36 .............................. CTTGAGCCGTTCCATCATCGGAATCACCCGAACCGC 842705 30 100.0 37 .............................. TTGGTCCCTTCGATCGTTCGCAACGTACTCGAACCTA 842772 30 100.0 36 .............................. CTGGTTTACGCCACCGTCGACGATCGGAGCATCCTC 842838 30 100.0 36 .............................. GGTCGGCGTCGTAGCCGAAGGCGATTATCTCCGTGC 842904 30 100.0 35 .............................. GGTCGCTTCGCGGGTCGTCGCTGACGGTCGTCGAC 842969 30 100.0 36 .............................. GCAGGGGGCGGAAACCTACCGCGAAAAGATTAGCGA 843035 30 100.0 39 .............................. GAAGCCGAGAGCGTCACGCCCGAAGCCGTCGTGGACGTG 843104 30 100.0 36 .............................. GTCAACGGGCACGATCGCGTAGCGGCCCGGCTCCGG 843170 30 100.0 37 .............................. ATCTATTTGCCTTTGTGAAACGGCGATTGCGGCCCCC 843237 30 96.7 37 .................A............ TTTCGGCACGGCTTCATCATCGTTGGCCTCCACCATT 843304 30 100.0 35 .............................. CCCCATGAGGCGGCGGCCACGCCAAGATTGAATCC 843369 30 100.0 37 .............................. AGTTCAGCCCAAACCGTTCAAGCATTGACTACACGCG 843436 30 100.0 36 .............................. TAACTTTTGAATCCGCTTGTCGTCGGCCATGGTCAC 843502 30 100.0 38 .............................. GAACGGCCAAGAGTGCAAAAGCGAGGGCGGGCAAACTG 843570 30 100.0 35 .............................. GGCTTGCCACGAATGCGGTGGTGAGGTTTTAGCGG 843635 30 100.0 37 .............................. CTGCAGCAAGCAGGTGTTGGCTTCGATGTTAAAGCGG 843702 30 100.0 37 .............................. GTCAGTCGGTCGCTGGTTGCCGTCGGACATTGCGTAT 843769 30 100.0 35 .............................. GAAATGACTGACGAACAACTCGCCCGCGACGACGA 843834 30 100.0 36 .............................. GCAATCAACTGGTGGTATCCCAATAAGCGAGCGTGG 843900 30 100.0 34 .............................. TTGGAGTGACGAAGGCCAAGACCCATTCGGCGGA 843964 30 100.0 38 .............................. CGCACCTGCGACCGCCGCTAGGGCGAGGATGGCGGTGT 844032 30 96.7 35 ...............C.............. GACGCATCGACATCCTGATCCGTGTTGTCGTCCGC 844097 30 100.0 38 .............................. GTATGAAATTTTACATCGCTGATTCGTCCGGTGATGTG 844165 30 100.0 35 .............................. TCCGTAAAACTGCACCGTAACGTTGATCGGCTCGG 844230 30 100.0 35 .............................. CTGAGACGCTTCACGGCCACCTTCACCCATTTAGA 844295 30 100.0 36 .............................. GCCAAGTCGGCGTGGTCCCCCGTCTCACCAACCGTC 844361 30 100.0 37 .............................. GCTGAAGGTTACGCTCAGGGAAAGGAGGATCATCATA 844428 30 100.0 36 .............................. TTGAGTCCATCCGCCGATGCATCGACTTCGTTATCG 844494 30 100.0 36 .............................. TGGATATGACCGTTACAGACGCCCGCGAGGTGCAAC 844560 30 100.0 34 .............................. GTGATTTCGATCTCCGAGTCGAGGGGGTCCTCGA 844624 30 100.0 34 .............................. AGCGAGCGCTACAACGTCAGCAAGACCTACGCGA 844688 30 100.0 34 .............................. TGGCCGGGCTGTTCGGGCGTGAATTGACCGACGA 844752 30 100.0 38 .............................. CCACGTGCGTCCGTGGTCATGTCCTTTCTTGGGCTATG 844820 30 100.0 35 .............................. ATCAATCAGGCGAAGCGAATTGCACCGAAAGGTGT 844885 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================== ================== 58 30 99.8 36 GTTCCAGACGGACCCTTGAGGGGTTGAAGC # Left flank : CGAGGAAACGATCGAACATCCGAACCTGAACCGGAAAGTGAGCTATCAGTATCTGCTTCGACTGGAGGCCTACAAACTCAAAAAGCATCTCTTGACCGGTGAAGCATACGAGCCGTTCGAACGGTGGTGGTGAGATGGTTTACGTTGTGGTCGTTTACGACGTTCAGGCCCATCGCACACAGAAATTTTTGAAATTCTTGCGGCAGTATCTCGTTCACGTTCAGAATTCCGTTTTCGAAGGAGAGGTAACTGAAGGGGACATAGAAGAAATCAAGCATCGACTCGAATCGATGCTTGAAGATGAGGAGTCGGTAATACTCTATCGGATGGCCTCAGAGAAATACGTTACTCGGACGGTGTACGGTACCGATCCAGCTGCGGATGACCAATTCTTGTAATTTGTTCATCGACCCCCGGGGTTTTGGCGGCTACTGCGGGTCGACGAAATAACTAAATGCTAACCGCGTATATTACGCGCTGTATGGCCGAAATCGGCCATG # Right flank : CGTCAAATGACGGACTTCAGTGCATCCAATCCTCGGTTTCAGATTTAGCTTGAAGATGTAAAGAATGACGCCGTGCGAAGCGATACACGATCCTCGTCATTCTATCCCAGATATGCTCCCAAACCCAACACCCCAGATCAGTACCTGGAGAGATCGGTATCCGCCGTGTGCGGACGTGGTCGATCGGGCGGTTGGGGATTTGGCGGATCGAGCCCCGAGGCGTCTTCGATTTCGCGCCACACGATTCCCGATTGCCGGATCGTGAAGAGCACCTCCTCGTCGTCTTTCTTCCGCATGATTCCGGCCAGCGACCAGCTGGGATTGTCTACCTCGATCGGGGATACATCCGACTCTGTGGTCGCATGGAGGTCGGGATCGAAATCCGGATTTGGCCGCACCACCTCCGGGTCGGGGTCGTCGTGTGCGCGTTCGCGCTCACGCGTGATCATCTCGTTCGCGCCGTTCGAGAAGCGCACAACTTGCGTGCCGGTCGCCCAGAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAGACGGACCCTTGAGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.50,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //