Array 1 93180-90573 **** Predicted by CRISPRDetect 2.4 *** >NZ_AKVJ01000007.1 Pelosinus fermentans B4 ctg16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 93179 32 100.0 35 ................................ AGCGGAAGCAACTTACCAAATAACGGAGACACAGC 93112 32 100.0 35 ................................ TTGGGATAGTAACGTCTCTAGAAGCTCCGCTTTAC 93045 32 100.0 34 ................................ ATTTAGACATCTAAGTGGCAGCTATTTATTAAAG 92979 32 100.0 35 ................................ CGAATATCTTTGTCTGCCACTGCTAATGCTAAGGC 92912 32 100.0 35 ................................ TATAGTAACTCCGTTTGTTGTCTCTGAGCTTCCTG 92845 32 100.0 36 ................................ CATATTATGGGGAGCCTTGAATTTCTTTTGCATAGC 92777 32 100.0 33 ................................ GCTCCGCTGTTTGATCCTGTGTCATTCGAGCTG 92712 32 100.0 34 ................................ TATGATTGGCGCTAACTCGGAGGCTTGGTATGCT 92646 32 100.0 33 ................................ AAATAGCCAGTATACAGTCCGTTATCAGACGTA 92581 32 100.0 34 ................................ ATCTGTAAAGCTACCGTTGTCATGGAGTGTCGTA 92515 32 100.0 34 ................................ TAAGTCCTCTCATGCCAATACCAATATGCCTGAG 92449 32 100.0 34 ................................ TAGAGCTAGACATTGTTCTATCAAACATTTCTTT 92383 32 100.0 35 ................................ AATTCACCAGTGCCGGCTTCAGCATCATTAACTTC 92316 32 100.0 36 ................................ ATCGTCTATGAAATCAAACAACGTAGGTGTATCAAT 92248 32 100.0 33 ................................ TGTCTGATGTGTTGACCATGCGTTATTTCTTAG 92183 32 100.0 32 ................................ TTATTGTTTTGGCTAACACCGTTGGCGTATTG 92119 32 100.0 33 ................................ TGTTCACCAGTTAACTGGTCTATGTATTCTTCG 92054 32 100.0 36 ................................ ATCATCTGCATTGTCAATAAATGCAGTTTCAACCAG 91986 32 100.0 33 ................................ ATTAGAAGTTGCTTTTTGGATAGCTTTGCAACT 91921 32 100.0 34 ................................ CCTTAGTAATTGCCAAGGTGACGGTGTGAGCTTC 91855 32 100.0 33 ................................ ACAGAAGAAGAAAAGGAAATGCTTGAAAACTGG 91790 32 100.0 33 ................................ TCAAATCTGCACCTCTAAAGATATAAGTCTTGC 91725 32 100.0 34 ................................ AATGTCACATGAGTAACCTCTATAATTCGCCATT 91659 32 100.0 34 ................................ ATTGTTCGTCACTCCGTTTACCTATGATACACAT 91593 32 100.0 34 ................................ CATTTTGATCATTTATTAGGGGCTAAACCCCATT 91527 32 100.0 35 ................................ TTATTAACTCTGTAGCCAACCATATTTGTTTTACC 91460 32 100.0 34 ................................ TGCCAAAAACGAGCCGAATTGCTGGCAGGTGAAC 91394 32 100.0 35 ................................ TCACCAAGACTAGCTTTGCCAATAGCCTGTATACT 91327 32 100.0 32 ................................ ACGTATTTGAAATTCAAGGTTTAGACCACCAA 91263 32 100.0 33 ................................ CAACTGAGTTGATGCTGTTTTTAAGTCCTGTTT 91198 32 100.0 32 ................................ ACGTATCTTAAAGCGATTGAAGCTCTACTACG 91134 32 100.0 33 ................................ AATTAAACAATATTTTATAGAGCGATTTATTAA 91069 32 100.0 33 ................................ AGATCTTCGGCAGCCAGTATAAAAGAGGAGTTG 91004 32 100.0 35 ................................ ATAGGTTTTATTTGTGACTACATCCATTCGTGCAA 90937 32 100.0 34 ................................ ATAATTAAAGATAATGAAAAACCTGAGCATAAGC 90871 32 100.0 35 ................................ ATGTAAAACTTGTTAGGGGTTACATTTCCTTTATT 90804 32 100.0 34 ................................ CCCATTGTAAGGTATTTCCTTGTGCCACTTTTCT 90738 32 100.0 35 ................................ GGATTATGGACCAATATGAAAGTTAACTATCAATC 90671 32 100.0 35 ................................ CGTTTTTCGGGTTTCAACATCAACCCTCTGGTAGA 90604 32 90.6 0 ......................A...CA.... | ========== ====== ====== ====== ================================ ==================================== ================== 40 32 99.8 34 GTCACGCCTTGCGTAGGCGTGTGGATTGAAAC # Left flank : TTTAGAAGATTATCCGCCATTTTTCTGGAAATGAGGGTTTGGCAATGATGGTATTAATTACTTATGATGTAAGTGTGACCACCGATTCGGGAAAGAAACGTCTTCGCAGAGTAGCGAAACAATGTGTAAATTATGGTCAACGTGTTCAAAACTCAGTTTTTGAATGTTTACTTGACCCAGCGCAGTTTGCAGAGTTAAAGCATCGCTTGGAAAGCATAATCAATCATGAGACGGATAGCCTGCGATATTATTTCTTAGGAAGCAACTGGAAAAATCGCGTAGAGCATGTGGGTGCGAAATCAGGATATGATCCAGAAGGAGTTCTGATGATCTAATGCGAACCCTAAGTGCTCATCGTTTTCCTGGGGCATTCGCAGTCTAGAAGGTACAAGCCTTCTTGATGTTTATATAAGGAAAATCTTTTTAAAAATCGATATAATTTTCTAGTTCGCGAAATCATGTGTTTTGACCCATGGTTTTCTTATATCCCACAATTGCCA # Right flank : TGAGGTGGAATCTCATCCTATCTCCGAATGCTTGGTGTTTATCCAAAGCAGTTGGAGTTATAGAAGAAGAAATGGGAACATACTGTATGGAATGATTAAAGAGGCAAAGAGGAGCTTTGTGAGTACCATTATATTGCCGAGGGAGAAGTCTTAAAAATAAAAGATACATTATGTGTCAAAGAACAAAAAACTTACAAAGTTGAGGGATCATAATGATATTTGTAAAACATACCCCTAATCATGCAGGTGTGGCTATATATGGTGATTGTTTAGATTTTGAGGAACTTTATGGTGCACTGCATGATGTTGTTGGTAAGGAGAATCAATATGTTGCCTACCAAGGTGTTCGTATAAGAGTGTTAGGGTTCTGCTATGAGCTGCGCCATGCTTTAATGGGGAATCGGGAATTTGAATTTGTTGAGAATGGTATGGATGAGAATCGGATGAAAGAGTTAGCAATGATTACTCCTAAGAAAAATATATATATAGGCACTCATATT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGCCTTGCGTAGGCGTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA // Array 2 106546-104919 **** Predicted by CRISPRDetect 2.4 *** >NZ_AKVJ01000007.1 Pelosinus fermentans B4 ctg16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 106545 33 100.0 34 ................................. GTGTGTCTTGGGTAAATCGAAATAAACTGTATTC 106478 33 100.0 33 ................................. CACGGTGCAGGAGTAGCTTTGTCTACCCTGTCC 106412 33 100.0 33 ................................. AGCAACTTAGCCTTAACAGTAAAAGGCACATAT 106346 33 100.0 32 ................................. TGCTAAAGGGGGTTAGTGATTGCCTAAACAAT 106281 33 100.0 33 ................................. TATGATTGGTAAACAGAATGTATCAGCTACTAA 106215 33 100.0 34 ................................. TTTAACTCGGCAATCTGCTTTGCTACTGAATCAA 106148 33 100.0 33 ................................. GATCACCTCTTTGTATCTGCCACAAGTACAATT 106082 33 100.0 33 ................................. AGCAAGCTCACTATTTGTAAACTGATCCAGCTT 106016 33 100.0 34 ................................. ATTCTTCCAACACCAAACCCGACTAATTTATTTC 105949 33 100.0 33 ................................. TCATTGGCAGGTATCATTAACGAATAGTCGCCA 105883 33 100.0 34 ................................. TCTTTGTGACGCTACATCGGCGAGTACTCCAACA 105816 33 100.0 33 ................................. TACTGTCGTTACTAGCCTAGTTTCTTTGGCTGG 105750 33 100.0 35 ................................. CATCTTTTTACTTAACCAGCTAAACATCCTCAACA 105682 33 100.0 33 ................................. ATCATCAGCGGGTTTACTACGCTCCCAAATAAA 105616 33 100.0 36 ................................. AATCACGGTTACATGTGTCATTTTGCGTTGCTTAAC 105547 33 100.0 33 ................................. ATCGTCTGGGTTATCAGTGCTTTGGCAGCAATC 105481 33 100.0 35 ................................. AATCGTTATCCATTAAAGAGCAAATATTGGATGAT 105413 33 100.0 33 ................................. CATTATGCTTGTCCCTCCTGTTTCACGCCTTGT 105347 33 100.0 33 ................................. GCAGTACTGCGTGACACAGATTGCCCAGCGGTA 105281 33 100.0 33 ................................. AATGACGTTATCGCTGTTTGTAAAGGTTTAACT 105215 33 100.0 36 ................................. CGGTAGTTATGGCTACTGGATTTATCGCGTAGTCTC 105146 33 100.0 32 ................................. TTGACGATGGACCGCAAATAAAACATTATTTC 105081 33 100.0 33 ................................. TTTGACCACTTAGCCGCCTTTAGTTTCATGGTG 105015 32 97.0 33 ...............-................. GCTTTCATGATAGCCGCAATCATTGGACTCTGA 104950 32 87.9 0 ...............-.....A.........CT | ========== ====== ====== ====== ================================= ==================================== ================== 25 33 99.4 34 GTCACGCCTTGCGTATGGCGTGTGGATTGAAAC # Left flank : ACAGGTTCACTTTCCTAAAGTTCAACTTGAAAAAGGTACAGCAGCCTATGTGCTTCATCGTTCGACGGAAAAAGTAGGACAATTCTTCTTTTATGAAAAATACCAGGATCAGCAAGCGTTAGATTATCATGGGTCTACGCCTTACTTAAAAGAATTATTCAGCAGTATTGCTGATCTGCTTCTCGAAAAACCAGAAGTTAAACTATATGAAGAAGTGGCAGCCATTTCCCGATAAGTAACGTAGAATAGTGAAAAGTTCCTGCAAAGTAATGTTCTTTGCAGGAACTTTGTCTTTTAATGGGAAATAATGAGGTAATATGGGAAAGTCTCCTAATGCGAACCCTAAGTGCTCATCATTTTTGTAGGAGATTCGCAAACCAGATATAAGAAGGCGTTTGACCACTTCTTATATCAAAATTCTCTATTTAAATAAAGCACATTTCGGGGTTCGCAAAATCATAGGATTCAACCCAGGTAGTTATTGCATCTCACAATCGCCA # Right flank : CAATCAATAGCACATTGTTATTGAGATCTGAAAATAGGTAAAAAAAGAACCTTCAGTGTAAACTGAAAGGCTCCTATATTTAGTCATAATGTCCTCTGCATTGTACGATTTCAATGACTTCATCCTCAACCTTATAGATGAGTCGATGTTCAGTGGTAATTCTTCTGCTCCAGTAGCCACTCAAATCATTTTTAAGGGGCTCGGGTTTTCCTATCCCTTCATTGTAGTTACGGTCAATATCCTTAAGGAGTTCATTGATCTTCTTAAGAACCTTTTTATCAGTAGACTGCCAGTAAAGGTAATCATCCCATGCGTTATCCGAGAAAATCTTATTCATCCTCTATAAGTTCCCTGATTTTACCTTTACCAGCCTTTAATTGGGCAATGGACTCCAGAAGTCTGTCATAGGTCTTCTTATTGCTTCTGATATAAAGATTTTCCATAAGATTGTTATACTCATCCTCTGAGATCATAACGACATTTCCACCTTGTTTGCGGGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGCCTTGCGTATGGCGTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : NA //