Array 1 95157-92562 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABFLN010000030.1 Gemella haemolysans isolate Gemella_haemolysans_BgEED14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 95156 35 83.3 29 TA...A-.T...C....................... AATCAATAACTTAGCGTCTCTTAACTTAT A [95144] 95091 36 100.0 30 .................................... GGGCGTTCCCCAGCTTTCTTATAGGATATC 95025 36 100.0 30 .................................... TCAAGTTCTGGCATAGGTCCATACCACATG 94959 36 100.0 30 .................................... ATTATCTGTGTGGGGGTTACAGACAAAACG 94893 36 100.0 30 .................................... TTATATTGTGGTATTTGCATCCAGTAAATA 94827 36 100.0 29 .................................... AATTGTTCTTCTCTTAATCTCTCATATTT 94762 36 100.0 30 .................................... ATACATCTTTAAAACAGCTTCTGACAATAC 94696 36 100.0 30 .................................... CCTAATTGACTTTCAACCCAAGTTTTAAGT 94630 36 100.0 30 .................................... TTCGCATTGACTGAATTAAGTCTTTCACGA 94564 36 100.0 30 .................................... AATCAGACACACTACTTTTACTAGCTCCAA 94498 36 97.2 29 A................................... AGCTAATAAGGTATTAAACTTTATTGCTC 94433 36 100.0 30 .................................... ACATAAGGTTCAATTCTTACACCATAATAT 94367 36 97.2 30 .....A.............................. TTAGTCATTGCTATTCCTCCATTAAATATC 94301 36 100.0 30 .................................... TATGACAAGTAGGACAATTAATTAGACCAC 94235 36 100.0 29 .................................... GTTACATGATTAATATCGTCTAATGAAAA 94170 36 100.0 29 .................................... AATATGTTTATTTACTTCATCTACTATGA 94105 36 100.0 30 .................................... GATGTGTCTAATCAGTTTAAGTACTATGAT 94039 36 100.0 29 .................................... TTCAGTTCAATACATTTGAAAATATATTG 93974 36 100.0 30 .................................... TAAAAGCAACTCATTTATATAGCTATATTC 93908 36 100.0 30 .................................... TTAGTGTATTCACTTTCTGTAAACTTCCTA 93842 36 100.0 30 .................................... TCATTGCCTTTATTTACCTTATTAGCAAAC 93776 36 100.0 29 .................................... CAGTAGACGATAACGAAGTAGTAGAAGAA 93711 36 100.0 29 .................................... AAGAAAGGTTGTTCTTCAGCAAAATGTTT 93646 36 100.0 29 .................................... TAACGCTTTTAAACGTTCCTTAATAGGTG 93581 36 100.0 29 .................................... GGGAGATTGGGAGCTTGTAAGAGAAGTTA 93516 36 100.0 29 .................................... TATTTTCCATTAGTTTGTTCAACGGATGC 93451 36 100.0 30 .................................... GACTATGTTCTTCATCATTTCCATGGATAA 93385 36 100.0 30 .................................... TGTCCTCATAATATTTTATAATATCAATTA 93319 36 100.0 30 .................................... TAATGGACACAACTTATACAGCTGGGCATC 93253 36 100.0 30 .................................... TTAATATCGAGTGTAATTTTATTGTTTTCT 93187 36 100.0 30 .................................... ATTTCAATAAAGTTTTGTTTTGGCAGGTCA 93121 36 100.0 30 .................................... TTAGCGTTAATAGTCTTAGGATCTAACACG 93055 36 100.0 29 .................................... GCGGTCTTTACTATTTCTTACTTGTTTAC 92990 36 100.0 29 .................................... GTCGAAATATACCGCAAAACATAACAGCG 92925 36 100.0 29 .................................... CGAACTCCTGTATTGAATAACTCATTTGT 92860 36 100.0 30 .................................... TTACGTTCGACAACAAGTCCGTTATCCAGT 92794 36 100.0 30 .................................... GGAATAGTAATTCCAAATTGTTCATCATTG 92728 36 100.0 30 .................................... TTTCTTTCGTTTATTTTAAATGGTATCGTA 92662 36 100.0 29 .................................... TATAGGCTTCAAATAAATCTTCAAAGCTG 92597 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 40 36 99.4 30 GTTTAGTAGAATTCAAAATTTACATATCTCTCAAAC # Left flank : TACTTCTATGAAAGCTGGAGTAGATGTCGTAAGTAGTTTCGATGACTTCGATTATAAAACATTAGTATTAGGAAGCATGTTCGAACTTGGACCAAATGAAGTTAACTATCACGGTGAAGTTGGTGAATATATCTCTAACAATACTAACGATATAGATTTAGTAATTAGCGTTGGAGATCTAGCTGAAAACATTACTAAACAAATTAAAAATGACAAAATAAAAACACTACACTTCCCTACTACTGCTGAAGTTAGTGAATATTTAAAAAATAACAAACACAAAAACGAAGTTATCCTATTTAAAGCAAGTCGTTCAATGAAATTAGAAACGATTATTGAAGAAATAGCGAAGTAAAACAGAATATTAACAAGCGTTTACGTTTATTGAGATTAACGTGAACGCTTTTTTTATGAATCTTCTTTTTTAGTTACCTAGGTTTATGTAAACAAAAATAAGATTATCGATCAAATAACACTCAATGTTATCTCATCAATAATCT # Right flank : CTCAAATCGAGATTTGGAGTGAAAATTTTGAATTTGGGTATAAAAAAATGGACCGACACCGATCCAGCCAAAAGGCAATTTAGATAAAATCTTTATTTGAACTTGAATGTAAATTTTGAATCTATTTATATTATACAATTATTTTCGCAAAAATGCAATACTATATTTCTCAATTGTCTCTATCAAAAATATAAACTTTTTCTATATAATTTTCATCAGATATATTATCAAATTGTTGATATTCTATATTTATAATACTAATTTTATTGACACATACTTCTTTATATATTTCTCTTACCTCTTCATCTGTAAAAACGTTATGAAGTCCCACTATAAAGATAATAGTTATTCCGCATAATTGAACAAGCACTTTCAAGAATTTAATGAATTTTTCTAAAATATCATCTTCTTCTACATGTATTCGAAAATCACCTAATTTCAATAGTGAATTTATGTCTATTTCTTTACCTTGTTCAACTTCAAATGGACTGTTAAATATT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAGTAGAATTCAAAATTTACATATCTCTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA //