Array 1 1259328-1263562 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP019368.1 Fluviispira sanaruensis strain RF1110005 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1259328 28 100.0 32 ............................ TCAGTCTGAGGGGTTTTCTCTTCTAAGCCCTC 1259388 28 100.0 32 ............................ TATTTACAGACAAAACTTTTATGGCCGTTGGA 1259448 28 100.0 32 ............................ ACCACACCTTCTGTGATAACTGATACTAAATC 1259508 28 100.0 33 ............................ AAATTATAGCATGTGCGATGTGTTGAAGTAGTT 1259569 28 100.0 32 ............................ TTGGGAATGTGAAAAAAGGACAAAAAGATTGG 1259629 28 100.0 32 ............................ AATTTATCTGCATTGGCCCAATATCAAAATTT 1259689 28 100.0 32 ............................ GTAGGAACAGCCGCACTATTTGTTACTATAAT 1259749 28 100.0 32 ............................ ATTTTGGCCAATTCGCATTTGTCACTAATTTT 1259809 28 100.0 32 ............................ AAAAAATTGTAGGAAAAGATTTAGGAATATTC 1259869 28 100.0 32 ............................ TCGAACTCCCAACGCACAATTGTTTTTTGTGA 1259929 28 100.0 32 ............................ GAAACCGGAGGCGGGGGAGGTAGTGATTTATT 1259989 28 100.0 32 ............................ AAAATCGCCTCTCTCGTCTTGGTGTTTATTTT 1260049 28 100.0 32 ............................ AATATGGGACAATTAAGCTCAGGGATAAAACA 1260109 28 100.0 32 ............................ TTGCGATAAACTTAAATATGCAGAAATAAAAA 1260169 28 100.0 32 ............................ TCCCCAAATAGTGGATCTTGCAGGGGTAAGGA 1260229 28 100.0 32 ............................ TAGACATGTCAGCCTCATGTTTGCCCTTGCGT 1260289 28 100.0 32 ............................ AACATATAAAAGTACCTGACAATATTGCACTT 1260349 28 100.0 32 ............................ ATTACAGATTTAGCGAGAACTTCAAAATCTAA 1260409 28 100.0 32 ............................ CATACAGAATCAATTTGCATTTGCTCAGCTCC 1260469 28 100.0 32 ............................ AGTCTCATATGTTGACACTGCGGCAGTAGAAA 1260529 28 100.0 32 ............................ CACGAAATAATATTGCGATGGTTTGCCTTTGT 1260589 28 100.0 32 ............................ TCATTTTCACTCATAAATGCTCGAATAAATTA 1260649 28 100.0 32 ............................ AAGTAAATAAATTTGGATCCTTTTCAAAAGTA 1260709 28 100.0 32 ............................ AAATTACTACCGCCCACGAGGGGCGAGACAGA 1260769 28 100.0 32 ............................ TTCGGACAGGTGATCAATTAACATCTGACAAA 1260829 28 100.0 32 ............................ TGTAGGCGCTGATAATCCCGAAGATAAAAATA 1260889 28 100.0 33 ............................ CCCATCAAAAGATGGGAAAATGGATAAATCAAA 1260950 28 100.0 32 ............................ TGTTTTCATAGTCTTGATAATATTCTTTATTT 1261010 28 100.0 32 ............................ TCATTGAAAACTTACTATAACGTCAGGAGATT 1261070 28 100.0 32 ............................ AATCTTGGGGAGAACGGTTCTAACCCCAAACT 1261130 28 100.0 32 ............................ ATAATTCAATACTGCATGATTTCGTCTCTTCA 1261190 28 100.0 32 ............................ TACGGATGTAGGGAAACTTTAAAATTTAGGTT 1261250 28 100.0 32 ............................ TATAGGCCGCCACGGAAGCTCACAGGGTGGGT 1261310 28 100.0 32 ............................ TCCTTCATATCCAGAGTGTTTTGTAAAGAGCA 1261370 28 100.0 32 ............................ TTTAATCAATCCATTAGTACACACAAACCTAA 1261430 28 100.0 33 ............................ AATAAAAGCACGGAATAAACTTGAAATTGAAGC 1261491 28 100.0 32 ............................ TTAAAGAAGGGTAGTAGGGGTGTTGGTAGAGT 1261551 28 100.0 32 ............................ AAAAAGACGATTGTCAGAAATTGATATAGACG 1261611 28 100.0 32 ............................ TATGCACGTAGGGATGGTTCGTCTCCGCAATT 1261671 28 100.0 32 ............................ CAAGAATTCTGAGGGGGTTGCATGACGTTTAG 1261731 28 100.0 32 ............................ TAGAACAAAAGAACAAAGAAAAGAGTTAAAAG 1261791 28 100.0 32 ............................ TGAAACGAAAATTTAAGGAATGATAGAAGAGG 1261851 28 100.0 32 ............................ GAACTAGCATTTAGTCCTAATTATCCCACTAT 1261911 28 100.0 32 ............................ AATAAAGTCAAGCCCCGAGTCAAACTTTTTTA 1261971 28 100.0 33 ............................ CCACAACGCTCAAAATGGGATATTCCGAGTTTC 1262032 28 100.0 33 ............................ TATTTTATCCAAAGTCTATGCTACATACTACGA 1262093 28 100.0 32 ............................ TCGCTCTGTTTATATATTACCTCGCATCCGAG 1262153 28 100.0 32 ............................ ACTAACGTGTCATATAACATAAATAAACATAC 1262213 28 100.0 32 ............................ ATATCCTTTAATAATTAATCACAACAATACAC 1262273 28 100.0 32 ............................ GACTTCGTGAGTGTGGGCATAGTTATGTGTGT 1262333 28 100.0 32 ............................ TACTTCAATTTTTAGCTGGCTATTTATTAGCC 1262393 28 100.0 32 ............................ CAAGTGAACTATTAGAATTTTTCGAATAGTTC 1262453 28 100.0 32 ............................ TGCAGGTGCCGCGAAGGCTTGAGTAGATACTA 1262513 28 100.0 32 ............................ TTACTGACAATTTGCCTGTTTATACATTGAGT 1262573 28 100.0 32 ............................ GTTTTTAGGATTGCTTTGTTCACTATGAACTT 1262633 28 100.0 32 ............................ AAAGCAGACAACCTGAGAGTTGATCGCCTTGA 1262693 28 100.0 32 ............................ TCTACGCCCAAGCCCTGCCCATCTGTGCGGAT 1262753 28 100.0 32 ............................ TCTTCGGGTTCGTACATGTAACAATTTACTAA 1262813 28 100.0 32 ............................ AGAAGAAAACTTAATCGCTTTAGATCTAGGTA 1262873 28 100.0 32 ............................ AATTGAGTCATTATTTAGTTTAACTAAATCCC 1262933 28 100.0 32 ............................ CTTATAAAGCGGTCGGTATTGGCTCTGTTACA 1262993 28 100.0 32 ............................ TAAAATTCTTCAAATCGATGACCCTATACTAA 1263053 28 100.0 32 ............................ ATGTAGAATAGGAGCACCCATTTTTTTCATAT 1263113 28 100.0 32 ............................ ATCTTTAAAGTAATAAAAATTTGCTAATGATA 1263173 28 100.0 32 ............................ AAAAAAATAATCTTAATTTATTATTGATAATT 1263233 28 100.0 32 ............................ ATTAAGGTCACAAAAAACAATAATTAGATGGG 1263293 28 96.4 32 .............A.............. TACAAGAAGACCAATAGTAAAAAAAATAATTG 1263353 28 100.0 32 ............................ TTCGAAAAAATCTTTGTCTTGATATAATTGTT 1263413 28 100.0 32 ............................ AGTGCTTGCAAGATTAGCTCTTACATTAATTC 1263473 28 92.9 32 ...................TG....... ACTAGCAATGTCGAATTGGCTTCGTGCAATTA 1263533 28 85.7 0 ........T.A..T.............T | GT [1263549] ========== ====== ====== ====== ============================ ================================= ================== 71 28 99.6 32 GTTTCCCGCTGCACAAGCGGTTGAAAGA # Left flank : GTAACAAAGCAGTTTGCTTTAAGCGTACGCGTATGCACGAAAGATTGTCCGACGCCACTGTGCAGCGGAAATTAAGACGTTTTGAAAAACGTCTTAAAGATTCAGCAGCAACTTCTAAGCCGACTGCAGAAAACTATCGAGAATTTTTAGTGAATAAAAAAATGGCGCAAATAAATTCTGATATTGTACATGGAATTGAAACTAAGCCTAGCAATCAAAAAGATCAAAATGATAAAAAGCGTAGTAGAAATATTGTGCTTTATGTCCAGTCTTTAGCTGTAAACGAGTTTATTAATGAACAAACACGTTGGAATAGCTATGGGCTTGCCAAGGAAAATTCTCTCCAAGGCATTTCTCTGCAATAAAACCTTCCTTTTACATGTTATTTGATAACATAATATAATTACAAGGAAAAGTGTTGTTGAGAAAATTTGAAGGCTCATTGCTTGAAATTTCAAACTTTTCCTTTTATGACTAAGGTCTTGCAGCAAAAATTTGCT # Right flank : TTTGGATGCACTATCTTTTCAGTATATGAGAAAGAGGCTAGAGTTTTAATCACAATATCTATTTCAATTTCATTTTTTACTTTGCGAAAGATATTTTATAATTAAGGGTGATCTTAAAGCTTACAGAACAATCGCAAAAGAGAAATTGGACAAGATTATAAATATGCACAATCTGCGGACACTTGATTGACGTGCTAGCATCTTTTTGTGGATCAAAATGCTGTCAGTGTAGAAGGAATAAGAGAGAGCTATGGCAATTGTATAAGAATTTGATCACTTTTTTGATATGTAAATCTTCTATTATTTCACAAACAGCATGAACAATGTTTACTATGAGATTAAGAAAAAGGCTTGTGATTAAATTTCGGATAATTCTCAATGAATGGATATTATTTTTTAGTTTGTATTTTATTATTTTATCTTTTTGATATAAAAAAAATATTTTTTATATATTTTTATAATTATAAAAAAATATTGTAATAATTTGAGAATGTGATATT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCCGCTGCACAAGCGGTTGAAAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //