Array 1 772007-773596 **** Predicted by CRISPRDetect 2.4 *** >NZ_CZAH01000001.1 Intestinibacter bartlettii strain 2789STDY5834879, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 772007 37 100.0 38 ..................................... TTAAAGATGCTGAAAGACAATGTGTAAATAGTATAATC 772082 37 100.0 39 ..................................... AACGTTCTTTGCTTGAAAGCTTCTGTAAGCCCACTACGC 772158 37 100.0 38 ..................................... TGATAGGTAAATTTCCAAAGAAATAAAATATTAATATC 772233 37 100.0 36 ..................................... GAAGAATATTGCATAGAAACAAGTTTAAGCGTTCGT 772306 37 100.0 36 ..................................... TAAAAATGGCGAGCTTTTTATGGATTACATAGATTA 772379 37 100.0 36 ..................................... GATTAGATTGTTATAATTTAAAAGCTGGCAAAATAA 772452 37 100.0 37 ..................................... ACTCTATTTTCATAGAGTTGTAATTATATAATTTACC 772526 37 100.0 38 ..................................... ATCAACACAAATATACTTATTCAGAGATAGCAAAAAAA 772601 37 100.0 37 ..................................... AAAGATAGCAATAATGTAGATGGTAGCTTGATAAGTG 772675 37 100.0 36 ..................................... AACGAAGATATAAACGAAAGGAATATAAATTGTGAA 772748 37 100.0 37 ..................................... AATCATTACCTACCAACTTACCATTTGAATTTTCATC 772822 37 100.0 36 ..................................... ATGCTTAAAAATCTAAGTGCTACAGATGAAAATGAT 772895 37 100.0 36 ..................................... AACTATGGAGCTCTAAAAGGAATGGCAGATGAATGT 772968 37 100.0 36 ..................................... GAAATAAGAAAGTTAAAAAGATTGTATAAAAAAGGT 773041 37 100.0 36 ..................................... GAAATAAGAAAGTTAAAAAGATTGTATAAAAAAGGT 773114 37 100.0 37 ..................................... AAAAGTGAATAATCTATGTCCTTACTTATATCTATAA 773188 37 100.0 36 ..................................... CTTTTAAGTCTGAAAGTAAGAGACTTAATTGTTTTT 773261 37 100.0 38 ..................................... GTAAATACCCTCCAATTAAAGTATCCCAATATGGAAAA 773336 37 100.0 38 ..................................... ATTAAGTCTGGATTTCCATATTCAATAGCTATAGTAGG 773411 37 100.0 38 ..................................... AGATTTTGTATAATTCAGAATCAGAAGGGGTGGTAACA 773486 37 100.0 37 ..................................... ACTCGAGTTTGCCATTTAGCACAGCTTCCTATTGCAT 773560 37 91.9 0 .................................G.TA | ========== ====== ====== ====== ===================================== ======================================= ================== 22 37 99.6 37 GTTAAAGAGTAAGTTCCATTAAAACAAGGATTAAAAC # Left flank : GTTAGCTTTAAATCAAAATAATATTAAAAAATATACAGCAGCAGATTTAATAGAAAAAGAAGAAATACTAAAAAGAGTACTTATAGGAAATATTTTGTCTTTTTCAAAAGGAATGGATTATACAGTTGACGAAACTATAAAAGTAAAGTTAGACTTAAATCAAATAGATGTTAAATTTAAACAAAAAGAAATGTTAGCTTTTATAGGAGAGTTTTTTATAAACTTTGAAATACCAGATAATTTTGCGATAGGTAAAGGAATATCGAGAGGATTTGGAACTGTAAAAAAGATATAAAATAGATTTTTAATAGTTTTGTTCCTACAAAATTATTGGAAACTTTGAACTTTGACAATTGAATGTATTGGAATTACTTGGTTTGAGGTAGATGTTAGTAAGCTAAAAAATGCAGTTTTTTTATAAAAAATCATTGTTTTGGAGTTAGATGAAAATAAAGTAATACCTCGGAAATCAGTAATTCCAATGGTTTTAGATTCTACGA # Right flank : AGTAAAAAATAAAAATATATTGAAATTTAAGAAGGAATTTGTCAGATACTAGCAGAAGTAATAAAATTAAGTAATATAAAAACTAAAGAAGGTGATATTAAGCTATGAAGCTAGTTGTTAATTCGGAAGGAGTATATTTGACTAAAGTAGGCGAATGTTTTTGTTTGAAAAAAGAGGGACAGAAACAAGAAATTGCTGCTAAGAAGGTTGAACAAATAATTATAACGACATCTACAGCTTTGTCTACTGATGCTATTGAGTTGGCTATTGAGAATAATATTGATATAGTGTTTTTAAAAAAGTATGGAAAACCTTTTGGAAGAGTGTGGCATTCTAAAGTTGGAAGCATAAGTACTATTAGAAAAAGACAGTTAAATTTAGATTCTAATAAAATGGGTACAATTTTAGTAAAAGAGTTTTTGACTCAAAAGATGACTAATCAAGTTGAATTTTTAAATGAATTATCTATGAATAGAAGAGATAATAGAAAAATTGAAATA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAGAGTAAGTTCCATTAAAACAAGGATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 140300-141158 **** Predicted by CRISPRDetect 2.4 *** >NZ_CZAH01000004.1 Intestinibacter bartlettii strain 2789STDY5834879, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 140300 29 72.4 6 ...A....A...A.C.AA..A..T..... AAAGGG C [140307] Deletion [140335] 140336 29 100.0 37 ............................. TAAGGATTTAATAACCCAACAATTGCCATAATAATCA 140402 29 100.0 37 ............................. GTATGTATGATTTTGAAAATCTTATATAACCTTTTTC 140468 29 100.0 37 ............................. ATATACAAGGCGCAGCAAAAAGAATAGAAGAAAAAGG 140534 29 100.0 38 ............................. TTAAAAAACTTTAGTAGTTTGGGTATAGAGTGTTATAG 140601 29 100.0 37 ............................. AATGGGTAGAAACTCAAAATAATGAAGGTGTTTTACC 140667 29 100.0 38 ............................. CAGGGTAACTTTTTATATTGTCCTACTACTGGATGTAA 140734 29 100.0 37 ............................. TATTTTGATATAATTTCTAACTATTCTTCATATTCTG 140800 29 100.0 37 ............................. ATAGCTTCATCCCAGTTTAGAATCTCTTTTACACTCT 140866 29 100.0 37 ............................. GAGGTTAAATATATTGAGAGGCTTTTAGAGTATAGAG 140932 29 100.0 36 ............................. TATAAAAGTTTATCTATAGTTGTATGCCCTGTTACA 140997 29 96.6 38 ................A............ AAAAATAGATTTAGAGTATTTAGAGATAGATTACAAGG 141064 29 96.6 37 ............................A TATTTTAGGTATAAGTGAAGATTTATTTTGGAATATA 141130 29 79.3 0 T...........GC.T........CG... | ========== ====== ====== ====== ============================= ====================================== ================== 14 29 96.1 35 GTTTTATATTAACTACGTGATATGTAAAT # Left flank : ATGCTAAAAATCATCTAAAATCTATTGAATTTGGATTTATGATTAGTAGTCTTACACCATACTGTTGTTGCAAGGATATGCTGACAAAATCTCAATATATCGTAGGTGGAATTATGCCAACTGTACTCTTAGGAATAGTTCCAGCAGTAATATCAATTTTCACAGGTTCATTATTTTGGTTTATTATGGGTGAACTAATGATTTTGGCAGGTGGTGGAGATTTGACGATTTTATTGAAATTATTGAGATATAAGAGTAAAAAAGAAGAAATCCTTTATATGGATCATCCGTATGAATGTGGATTGGTTGTATTTGAAAGAGAAAATAACAAAATTTAAAAATATTAATAGATTTGCAGTGAGTGATTTAAAAGAAGAACATATGTATAATTATTGGAAATACTGTGTTTGAAGGGTGTATTTTGGAATTAATAAAAAACACTACTTACACCTCACTGCAAAAATTATATTTATTAGGCAATTTGATTAGGCTATAATATT # Right flank : TTGGGCACATGATAGAGGAAAGATAAGATATGCTGAAGATTTTATATTATCTATATGACATAGGTAAAAAATATAATTGATAAGAAATTAAATTATATTTTTTAACAACTATATTTTATCTATGCAAAATATTAAAAATTATTTACTATAGGAAGCTAGACTAAGTTTCAAATCTTCTATAATATCCATTTTAAGATTTTCAGGTTCTATAACCTTAACATTACTGCCCATACTTAAAATCCAACTTTTAATTTCATTATAGCCCCTCATATTAGCCTCGAAAAGGATGTAATCATCAAAATCGGTTATTTTTTGATTATCTACCCAAATTTTTTCTTTTATTATGTACCTAAAATCATTTCGTATTTCTAAAATAACTTTAATTTCATTACCCTTATAAATACCAATACAATTTTTTATATAATTTTCACTTGAAAAATTTTCATCTATGGAATAGTTTTCTTCTAAAGTATTATATTCTTCAATTCTACAAATTTTAA # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:-0.17, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTACGTGATATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 151556-153886 **** Predicted by CRISPRDetect 2.4 *** >NZ_CZAH01000004.1 Intestinibacter bartlettii strain 2789STDY5834879, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 151556 29 100.0 37 ............................. TATAGCAAATATACTGAAAAGGGATGTAATATAACTT 151622 29 100.0 37 ............................. CTTTGAGATAATCGTTTATAAGGTTTCTTAACAGATA 151688 29 100.0 36 ............................. CTTATATATTTATCTTCTATAGCTTCTAGTTCTATT 151753 29 100.0 36 ............................. ATAGGCTTTTAAGCGCAGCTTCAAGGAGGTTTTTAA 151818 29 100.0 38 ............................. AGCGAATACTAAGAAGTGTTTTTTTTTATTTTTTCCTG 151885 29 100.0 36 ............................. TGTTTACGCCATCTACGAGAATGATATCCTTTAACA 151950 29 100.0 38 ............................. TTATACATTACTGTATATAGTAACTATCGGCTATTAAT 152017 29 100.0 36 ............................. TAATAGTGAATGTGTAAATAAAATAGCAGATACTAA 152082 29 100.0 39 ............................. TTTAGGAATTGCAATGATGATGCAACTCGTAAATCAAAA 152150 29 100.0 37 ............................. AACAAATGTGGGCACAACAACAAAGAAATAGAGGTAG 152216 29 100.0 37 ............................. GAACATGAAAAAGATAAACTGGTAAAGCATGCTAAAA 152282 29 100.0 37 ............................. CTTGGAGTTTCTCCACTTCCACCACTTCCTCCATTAG 152348 29 100.0 38 ............................. GAACGTGATAAGCTAAGAAAAAAATATAAGAAGGGAGG 152415 29 100.0 37 ............................. AAAATAAGGACATAGTAGGTATAATAATCCTCTATGT 152481 29 100.0 36 ............................. GTTTAATATTTTTAGCTTTTAAAATAATATCCGAAC 152546 29 100.0 37 ............................. GCACTTAGATATAATTTACCTTCTAATGTTACTGATT 152612 29 100.0 37 ............................. TACAAAGCCGGAAACACAACAGTCAATGGAATAACAG 152678 29 100.0 36 ............................. GATAAACTAAAGATAGAGTATAAAAACACGTTGATA 152743 29 100.0 36 ............................. AAGAGTATAAAAGCAATAGGAAGTGAATTTAGTTGC 152808 29 100.0 36 ............................. AATTGCAATGATTGTATGATACATTAGAAGCAAATA 152873 29 100.0 36 ............................. CAAATCTTGGACTGAATATATAAAATACAAAGGCTG 152938 29 100.0 36 ............................. TCTCTTATAGAAAAACCAACTTTTACTTCTGCTACT 153003 29 100.0 37 ............................. TATTACAAGAAAGGAATACCAGGAGGTGCACCTAATA 153069 29 100.0 37 ............................. TTTATATTAATAACTTCTTATTTCTTTTAATGCTAGT 153135 29 100.0 38 ............................. GATATATTTTAATAGAGGTATGATTTAATATACTTTAA 153202 29 100.0 36 ............................. GTACAAGATGTAGATTATACAGAAGAACCTATAGAA 153267 29 100.0 36 ............................. TATTTATCTCTAATTCTTCTATATTAAGTCGTAAAG 153332 29 100.0 37 ............................. ACTAATGTAACCGAAGTAGCAGATATGGTAGCAAAAC 153398 29 100.0 37 ............................. CTAGCTCTTAGTATGTCACTTACTGCTTCTACTTCTC 153464 29 100.0 36 ............................. TCAAATAAAGTTGTACTTAATAATGCTTTATTATTT 153529 29 100.0 38 ............................. TAATCTTTTTCTAATATTCTTAGAGAGTTTAGAGTATA 153596 29 100.0 37 ............................. TTTAAAGAGCAATATAAGGCTTGGAGCAAAGAACAAA 153662 29 100.0 36 ............................. CGATATGACGGTAATAGTAAAACCAGTTAAAGAACC 153727 29 93.1 35 ...........................TC TATATGACTTAGTAATATTAGATAAAGAATCAAGT 153791 29 100.0 37 ............................. ACAGTTGTAGTAGTTCCATCTACTGTACATTTTGTAG 153857 29 93.1 0 ...............C.......C..... | T [153884] ========== ====== ====== ====== ============================= ======================================= ================== 36 29 99.6 37 GTTTTATATTAACTATGTGATATGTAAAT # Left flank : AACATTTTATAGGTGATGAAAAATATAAAGTATTGAAAGCATGGTGGTAAAATGTTTGTTATTATTACATATGATATTGCAGAGGCTAAAATATTGAATAAAGTAAGGAAGACTTTAAAGAAATACTTAATTTGGACTCAAAATTCTGTATTTGAAGGAGAAATACTTCCAGGAAAATTACATAAATGTGTGAGTGAACTAGAAAATATTATAGATAATGAAGAGGATTCGATTTATATTTATGAGATAAAAAATAGTAAAAATATACAAAAAAATATATATGGAATTCATAAGAATTTTGATGATACATTTATATAAATTGCAGTGGGCGATTTTTTAATAAAAACACTTCCAAAGTATTGATATTACTTTGTTGGAGATAGTTTTATATAAAAACAAAAAAACACTACTTGACCTTCACTGCAAAATTCAATATATTGATATATTTTTTATTGCTATGATATAGTAATATCAAGGGATATAAAAAATTATTTTTTGGG # Right flank : TCAATTTATAAAATAAATACTATATATTAAAGGGAAATAAATATTATGACAATAGTAGATATGTTTTATTTAATATTAGTCATAATTGTTGCTATAGTGTGCTTGTTTTGTAAATTGAGTACAAACTTCTTTGTGAAAAGATTAAATAAAAAAGTATTCATTGTGAGTATTATTTTATTTTCAATTATTTTAATTATTGTTACATGTGCGTTAAAAATAGACTTTAGAAAATCATTATGGGATTATTAAAAAATAAATAAGTTTTTTACAAATATTGTATTATAATATTTTTAGAACACAGTATATATGTGAATCAAAAATAAGGGGGATAACACAATGATACTAGATATTAATAAAATTGAAGAAAAAGCATTGGCAAATTTTAAAGGTGGAGAAAAGGCATTAAATGCAAGAATGCATGTAGACGAAAATAATAAAATAATCTTCGGAAGATTAGAACCAGGGGCATCAATAGGTGAACATACTCATGAAACTAATAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGATATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-85.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //