Array 1 249337-253264 **** Predicted by CRISPRDetect 2.4 *** >NZ_UIWO01000002.1 Klebsiella pneumoniae strain EuSCAPE_PT069, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 249337 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 249396 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 249457 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 249518 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 249579 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 249640 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 249701 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 249762 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 249823 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 249884 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 249945 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 250006 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 250067 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 250128 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 250189 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 250250 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 250311 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 250372 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 250433 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 250494 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 250555 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 250616 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 250677 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 250738 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 250799 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 250860 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 250921 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 250982 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 251043 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 251104 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 251165 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 251226 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 251287 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 251348 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 251409 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 251470 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 251531 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 251592 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 251653 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 251714 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 251775 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 251836 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 251897 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 251958 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 252019 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 252080 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 252141 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 252202 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 252263 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 252324 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 252385 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 252446 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 252507 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 252568 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 252629 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 252690 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 252751 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 252812 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 252873 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 252934 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 252995 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 253056 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 253117 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 253178 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 253236 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //