Array 1 93355-96576 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMOW010000009.1 Flavonifractor plautii strain BSD2780061687_150420_C5 NODE_9_length_107479_cov_27.3712, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ========================================= ================== 93355 33 100.0 33 ................................. GACAAAGTTTGAACGGGATAATTTGCACCACCA 93421 33 100.0 34 ................................. TACTATGTATCCGTAGTTGTTGCGAATGATATGA 93488 33 100.0 35 ................................. GCTCTACTGCTCCTAATGGTGCGGCAGGTTCTCCC 93556 33 100.0 34 ................................. TTGTATACTGTGTTGATGGAGGAACTAAAGCAAG 93623 33 100.0 36 ................................. ATATGATTTTTCTGTTACAACCTCCGGCCTAGAAGG 93692 33 100.0 34 ................................. TGCTGGATATGATTGTGAATGGGTAACAAGAAAC 93759 33 100.0 34 ................................. CAAGCGTATCAACGTTAACCCTAAAATTTATCGT 93826 33 100.0 35 ................................. TGAAAAAATAGCGGCGGGACGATTGCCCCGCCGCA 93894 33 100.0 35 ................................. TGCGTAGCGCAGGCGGTAGTGGCGAGGTCGTACCG 93962 33 100.0 35 ................................. AGCATTCTCGCGGCCAGGAAGGGCCTGCGCCAGCA 94030 33 100.0 35 ................................. CAACAGTTTATGCAGCAGATGAAGGGCAAAGACCC 94098 33 100.0 33 ................................. ATTACCGCGAACCAGGAAGCCCAGACCGCCGAG 94164 33 100.0 33 ................................. CTGAGATTTCCGCTTATTCGGAAAAGGCTTGGC 94230 33 100.0 37 ................................. TTTACCGCTCTCCTTGAGGGTCATAACGCCGAAGCGG 94300 33 100.0 34 ................................. ATCTCCCGTCGCTCTGTGTATGCGCTCCCATCCT 94367 33 100.0 34 ................................. TCAACTAAATCGAATGGACTACATACCTTATGCG 94434 33 100.0 35 ................................. ACCGGGGCAGTAAGTACTTCATACATGGCGTCGTA 94502 33 100.0 34 ................................. CGCTCCCGCGCGGCGACCGTCTCGATGATCGCCA 94569 33 100.0 35 ................................. CTCTCCGCTATATTTGCTTGTGTAAGACCCGTCGC 94637 33 100.0 34 ................................. CCCCCTGTGGCAGAATAAGACGGTTGATGAAATT 94704 33 100.0 37 ................................. TATCAAATTCTTTTGTAGCTGGCGCAGATGTTATCCA 94774 33 100.0 33 ................................. ATCCACATACCTCCATGACCATACATAGAAATA 94840 33 100.0 35 ................................. CCCTCCACCACATCTATAGTATACCACAAGCGGCC 94908 33 100.0 34 ................................. CCCTTCTTCTTCACGGGGGGCTCGTCGTCGTCGT 94975 33 100.0 34 ................................. TTTTGTTGTAACACCTCTTGATAAGGAACGTTTT 95042 33 100.0 34 ................................. CCCTTCTTCTTCACGGGGGGCTCGTCGTCGTCGT 95109 33 100.0 41 ................................. GCCCCCTGGCGTTCATGCGCCGTTTCCGTCTCTGTGCGTCC 95183 33 100.0 34 ................................. CATGATAGCGTTAGCGAAATTACGGGCAGCGATA 95250 33 100.0 35 ................................. CAGGGCCAAGAACTCATAAAAATCAAGCTCCATAT 95318 33 100.0 34 ................................. TGTGTCATAGCCTGAACGTCATAGCCATAGCGCT 95385 33 100.0 35 ................................. GGGAGCTGGGTATACTTGTCGGCAAGATGCCAGAC 95453 33 100.0 36 ................................. ATCAAGAGACCCTGGCCTAACAATAGCACCAGAGCC 95522 33 100.0 34 ................................. AGAAACTTTATGAGAAGGATGCAAGAGGAGGTAC 95589 33 100.0 34 ................................. TACACTGAATGGGCAAGCAACGCAAAGGCTTGGG 95656 33 97.0 34 ................................C ATGTTTGTGACCTCCTTTACTGTACTTATAGTAT 95723 33 97.0 36 ................................C TGGAGGGCAGCTGTATCACCAGCGTTGAAACGGTCC 95792 33 97.0 34 ................................C ATAATGAGCGCGTAGGCACGGAAGGGGAGCGCAT 95859 33 97.0 37 ................................C TTCATCACATACCGGGCAACGTAAGCACAGGTTTCCC 95929 33 97.0 37 ................................C ATAAAAGGCATAGGTGAAATCATCAAAGCCTATCTCG 95999 33 97.0 34 ................................C GGCAACGGCCAGGATGGCTTTGCGCTCCTCCTCG 96066 33 97.0 35 ................................C AGGTGAAGACATCCATGGTTGCCCGTCTGCAAACT 96134 33 100.0 36 ................................. AGTAGCTCGTCAGCCTCCAGGCGCTTGTCGTTGCTC 96203 33 100.0 35 ................................. TGGATCTGGAAGGCCATACGAAGCTGATTGATAGT 96271 33 100.0 35 ................................. GAGGATAGCTGCGCCTCCCCCGGCGTGCGGGGCGA 96339 33 100.0 35 ................................. GGCATTGAGACGGGGGCCAACAGCTTCGGCTACCT 96407 33 93.9 38 ............A.........G.......... AGTGAGAAATACGACATCACCAAGCATCCCCGGTATAA 96478 33 93.9 34 ............A............G....... CAGCGGCTGGACCGCGGCCACATGGAGTATGTCT 96545 32 84.8 0 .....C......A...............-..CC | ========== ====== ====== ====== ================================= ========================================= ================== 48 33 99.0 35 GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Left flank : GGACGCCTATCCGCCCTTTTTGTGGAAGTGAGGCCATTATGCTGGTTTTGATTACCTACGATGTCAATACGGCGGATGCCGCCGGGCGCAAACGCCTGCGGCAGATCGCCAGGCAGTGCGTCAACTACGGCCAGCGGGTTCAGAACTCCGTCTTTGAGTGTAAGCTGGATCCAGCCCAGTACAAGCTGCTTCAAGCCAAGCTGTGCGCAATCATGGACCCCGAACGGGACAGTCTCCGCTTTTATTCCCTGGGAAATCGCTATGAGCAGAAGATCGAGCACTTTGGCTGTAAGCAGACCTACCTTCCAGACGAACCTTTGATTTTGTAGCGTGCGAAGTCCAAGATGACACGCCTTCTCCGGCCGGTTCGCACCCAAAAAGCATAAAGGAAAGCTTAATGGAGCATAGGCGCGTTTGTTTTTGTATGCTCAGCCTTCTTCCCCTTGTGCAAATAAGCAAATTGAGCCAAGCAAACTCCCTGCTCTTTGGTAAAGTTTGCT # Right flank : CCGTCTTACAGAGGCGCCTGAGCCGTTTACAGGAGCCACCGCATAGGGGCGCGGGTTGATTCAGATTTTTCACCCCGCGCCTCTATTGTTTGCGCTTCTTTTCGTTGACTGGTCTAGTAGGGAATGATATAATAGGATGATTATGACAAAAACTATGGTGGGAAGATTGTATTATGTGGATTTCAACTGACTGGAAGGACTATGAACTGCTGGACTGCGGCGGCGGCGAGCGGCTGGAGCGCTGGGGCAAGTATCTGTTGGTGCGGCCCGATCCTCAGGCCATCTGGCGTCCGGAGGGGCGGCATCCCGGATGGCGGAGGCACGACGCCCGGTACCAGCGCTCCTCCACCGGAGGGGGCCAGTGGGTCAAGAAGGAACTGCCCCAGCGCTGGACATTGGGCTACAAGGGGCTGACTCTCAACATCAAGCCCATGAACTTCAAGCATACCGGCGTCTTTCCAGAGCAGGCGGCCAACTGGGACTTCGCCATGGAGCGCATC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTCTCGCGGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.20,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //