Array 1 2090811-2086361 **** Predicted by CRISPRDetect 2.4 *** >NZ_RDAV01000001.1 Klebsiella pneumoniae strain KLPN_M39 KLPN_39M_tig00000001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 2090810 29 100.0 32 ............................. CGATGCCGGATCCCGAGTTTATCCCCGCCGGT 2090749 29 100.0 32 ............................. ATATTAAAGGTTTTAATGCGATCTACCTTTAC 2090688 29 100.0 32 ............................. ACGGATCAGTAGTTACTGACGGATCGCCCCCA 2090627 29 100.0 32 ............................. CTGTGCGAGTTCGGCATGACACCGGCCAGCCG 2090566 29 100.0 32 ............................. GAGGGGGCCGAGGGAGCAGTGATCAGCAACGT 2090505 29 100.0 32 ............................. CCAAACACAGATTTTCGTAACGTTATCCGGGT 2090444 29 100.0 32 ............................. TTTTTTTTCGATCCCCTCCCCACCACTAAACG 2090383 29 100.0 32 ............................. CGCCGTTATCCAGAGCAAATGACTGAGTAACC 2090322 29 100.0 32 ............................. GCCAGAGCGGTGAAGCGCCAGCGCCGCGCCCG 2090261 29 100.0 32 ............................. TCGCTCACCCTGAGCCGCCAGACCGGCACGTG 2090200 29 100.0 32 ............................. GGCCCCAAAGGCGAAGAGGCACCGGCCTACGG 2090139 29 100.0 32 ............................. CAATGGTGATGGACTATGACCGATAGCAGCGT 2090078 29 100.0 32 ............................. CAATATATGGTGTGCTGACGGGCTGTAAAAAT 2090017 29 100.0 32 ............................. GATAATGACTGACAATATCTTACCCGCTACCG 2089956 29 100.0 32 ............................. GTATTGATAACCTTTAGGATTTATAGAAATGG 2089895 29 100.0 32 ............................. TGCTTCCAGCATTTCCGGTGCTGAGGCGATTA 2089834 29 100.0 33 ............................. TGGTGCCGCTGAAATTAGCGCCGCTTACCAGGC 2089772 29 100.0 32 ............................. CCCTGCGGTGCGCCAGTTCCCTTATTGGTGGC 2089711 29 100.0 32 ............................. GCGCAACTTAAACTGTGGGTCTTCTCTGGACA 2089650 29 100.0 32 ............................. ATCAACTGATTCGCTCAGCCTGGGAAGATGCA 2089589 29 100.0 32 ............................. AATCTGGCACTCGCTTCCGGTGATATTCTCTA 2089528 29 100.0 32 ............................. CAGAAAGTCACTTAGCATCGCCTTTCTCCTGT 2089467 29 100.0 32 ............................. TCCTATCAGACCAGGATTAACCCGCCTTTCCT 2089406 29 100.0 32 ............................. GAATTTCAGTCCAGAAATATTTATCCAGAGGA 2089345 29 100.0 32 ............................. CTGGTGGAGCGCGCAGAACTGTATTCGACAAC 2089284 29 100.0 32 ............................. GTGGCCTTTCATGACCGTTTCCGAGCATGGAC 2089223 29 100.0 32 ............................. CACAGTCTGTTTTCCAGAATGTGCATGGTGCA 2089162 29 100.0 32 ............................. TCATCCAGCAGGACAAAGCCAGAAAACTCTTC 2089101 29 100.0 32 ............................. CAACTCCGCAGCGCCTGGGAGGGGTTTCGGAT 2089040 29 100.0 32 ............................. CTGGTCCCTTTCTTGAATCCGCCGGATGCTGG 2088979 29 100.0 0 ............................. - Deletion [2088951] 2088950 29 82.8 32 ...CGTG.G.................... TACACAAAAACGTTTTACAGTTGCGCAGCGCT A [2088940] 2088888 29 100.0 32 ............................. TGCGCGGCAGAATCGTCGCCGTCCCGCCCGGT 2088827 29 100.0 32 ............................. CAGGTCATGATGAAGACCTATCCGCTGGCCGA 2088766 29 100.0 32 ............................. GGATTCACCTCGACCTGCTACGACGGACAGTA 2088705 29 100.0 32 ............................. GCGACGGCGTGGATAGTCGGGATTTCACGCTA 2088644 29 100.0 32 ............................. CCGGTTGACCGCACGGCGCCAGCGCGCCCCTT 2088583 29 100.0 32 ............................. GCCGGCAATTTCTCGTTGAGGGCGCAGTTCAG 2088522 29 100.0 32 ............................. TTGAACGATTCGGTTACCATCGCCTCCTGCGA 2088461 29 100.0 32 ............................. ACACCCGAGATTTACCTGTCAGCCAGCGGCGG 2088400 29 100.0 32 ............................. TAATGAATAGCAATTATCCATTTTTAGTAGGG 2088339 29 100.0 32 ............................. GCTGCGTTGCCGTATTTACTCGCAGCGGTGGT 2088278 29 100.0 32 ............................. CTGTCGGCCCGCCAGCGCTCAATAGGCGCTAC 2088217 29 100.0 32 ............................. TGTTAGCTGAGTGTCGCCGGCACCGATATATT 2088156 29 100.0 32 ............................. GGAAACCAGTTGCCGATATGCCCCGTAAACGC 2088095 29 100.0 32 ............................. AACTCATGACGGGCAAGCGGGTCGCCACCGTT 2088034 29 100.0 32 ............................. CGCTCTCTGGTATGTACTGCAACGTGCGATTC 2087973 29 100.0 32 ............................. GTAAATAACGATTATGCACTAGAGGAGTTGTC 2087912 29 100.0 32 ............................. TCATGCAGCAGATACAGAAAAAGGCTGGGCCG 2087851 29 96.6 32 ............................A TATGCAGGCCGCAATTGCCTGTAGCTGCTGCC 2087790 29 100.0 32 ............................. GGTGGAACCAATGTCGCCAAAGCAATCGGAGT 2087729 29 100.0 32 ............................. AACTGTCCGACGTGGTCGCCGGTCGTGATATG 2087668 29 100.0 32 ............................. GGGATAATCTCAGAGTGTAAGTCATTGTCACA 2087607 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 2087546 29 100.0 32 ............................. TTATTATATCTTCACGGTGAGGGAATGGTCCC 2087485 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 2087424 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 2087363 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 2087302 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 2087241 29 100.0 32 ............................. TGCTAACCGGCACGTTTACCCGGACGAACACC 2087180 29 100.0 32 ............................. CTGATCCCCTCCAACAACACGCCAGGCACAGC 2087119 29 100.0 32 ............................. CGGTTAGCAATCCCGGGCACGCTATGGATACC 2087058 29 100.0 32 ............................. CGGGGATCAAAAGTTGCCACACCGTCAAAATG 2086997 29 100.0 32 ............................. GGGCTGAATGGCGAAAATATTGGCGATCTGTT 2086936 29 100.0 32 ............................. TCGACGGTAACCCGTGGAGCAAACTGGAGCCG 2086875 29 100.0 32 ............................. GAGGCACTGGGTGAATTATATGTTGAGATTGA 2086814 29 100.0 32 ............................. CAGGAAAAGGCGATACAAAAGGCAGTGAGCGA 2086753 29 100.0 30 ............................. TGCGGCATCGCTCTTCATGACTGGCGATAT 2086694 29 96.6 32 .....T....................... AGCTACTGGCCGCCAGCCACTGGATGACGTTG G [2086690] 2086632 29 100.0 32 ............................. CCGTGAGCCGTGCTCCTCGGTCGCCATCCCCA 2086571 29 100.0 34 ............................. CGAACCAATAAGCGCCCCTTGCCGAGTGACTCCC 2086508 29 100.0 32 ............................. GGATTTCCATCTCCGGCGTCTGACTACGTTGA 2086447 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 2086389 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================== ================== 74 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGTGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGACCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //