Array 1 47417-48768 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSKI01000015.1 Klebsiella pneumoniae strain AM28-14AC AM28-14AC.Scaf15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 47417 29 100.0 32 ............................. GTCATTTGGTTTTCCTGGCGGTGTGCAATTTA 47478 29 100.0 32 ............................. GACTATGACCGATAGCAGCGTTTTGCCCCCTA 47539 29 100.0 32 ............................. CTGATCTGGCCGGACTTTATCGCCTACAACCC 47600 29 100.0 32 ............................. GTGGCGATATCGGCAACCAGATCGTCTATCTG 47661 29 100.0 32 ............................. CACACCCTGGCGAAATACACCCGCCGCGGGAA 47722 29 100.0 32 ............................. TTGAGTTCGGGTCACGCCGCCGGGGTTGAGAG 47783 29 100.0 32 ............................. GCTGGATTACATGGTGTAGAAACTATTGAGCT 47844 29 100.0 32 ............................. CCTCTAAGGTCATTTGGGGTTACATCCTCAAT 47905 29 100.0 32 ............................. GCCTTTTCCGTTTTGCCGAAGAGTGTTGCGAA 47966 29 100.0 32 ............................. GATTATGCAAAACGACTTAGAGCCATAAGAAA 48027 29 100.0 32 ............................. TTTTCGGAATTACTGCGAGCGAGAGAGTGTCG 48088 29 100.0 32 ............................. GCTGCGTTGCCGTATTTACTCGCAGCGGCGGC 48149 29 100.0 32 ............................. ACCGATAGCAGCAGCATATTGCCCCCTAACGC 48210 29 100.0 32 ............................. GTTCGAGCAGCAATTGCGTGATCACCCGGATC 48271 29 100.0 33 ............................. CGCCGGTCAGTGGTCAGGCAGGAAAAAAGCAGC 48333 29 100.0 32 ............................. CTCGAAAACGAACAGCCCGTAAACCATCATCA 48394 29 100.0 32 ............................. GCTATGGGAGTTAATGACATGGAACAGAAATT 48455 29 100.0 32 ............................. TCGTAAAAGTCGGCGACGTCACCCTCTGCCAG 48516 29 69.0 12 .................AACTT.TCG.A. GTTGGTGAAATT Deletion [48557] 48557 29 100.0 32 ............................. GCTCTTCTTCCTCCGCGAGTTCTGCATACGTG 48618 29 100.0 32 ............................. GATTCTAATTGACGTTGTAATAATCGTGTGTG 48679 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 48740 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 23 29 97.6 31 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCGGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //