Array 1 18231-16518 **** Predicted by CRISPRDetect 2.4 *** >NZ_ADVK01000030.1 Fusobacterium nucleatum subsp. nucleatum ATCC 23726 contig00035, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================================================================================= ================== 18230 30 76.7 109 ..AA....G...A.T...A..........G AAATAAAAAATTGTAAGAAATTAAAGTTTTTTATTTTTTAGTAAAAAAACTTACATTGACAAAAAGATATAAAAAAAGTATTATGTAGGAGTAGTTTTTTTAGCTAGCT AC [18207] 18089 30 100.0 37 .............................. GCAACAGCCCCTGCAACTGTTTCATCATTTTTGCTAA 18022 30 100.0 36 .............................. GGGCTAAAAGTGGAGACTTAAAAAAGTTAGCAAAAA 17956 30 100.0 35 .............................. CAATGTTTAGTACATTGTTAGGAAATAAAGATAGA 17891 30 100.0 36 .............................. AAGCTATTAAATGCTGGATAAGCCTTTATAGAATAA 17825 30 100.0 38 .............................. TCATAAATTATTGTTATTTCAGTTCTTCTTGCATTTTC 17757 30 100.0 37 .............................. GCTGTTAATATAACCACATCATCATGTAGTTCAGCTC 17690 30 100.0 36 .............................. GATGAAATTTTAAAGAAAATTTTATAAAATTTGCGA 17624 30 100.0 37 .............................. AATCAATGGATGGTTTTGGAAATATTCTGGCCATATG 17557 30 100.0 37 .............................. TTTATTGATTAAATCAAGCCATTCTTCAACAGCTTCA 17490 30 100.0 36 .............................. TATTTTTTATTTGAAGAAGATGGTATTACACCAAAT 17424 30 100.0 36 .............................. GGAGTTAAATACTTAGTTGGAGAAAAAGAAAATGTA 17358 30 100.0 38 .............................. CCATAATTTTTTGAATTTCATTATCTAATGGATAAATG 17290 30 100.0 38 .............................. TAAATATCATCTATACCATCATTGAATTTAATTACATC 17222 30 100.0 39 .............................. TATAGGTATCAGTATTTTTTTCTTTATCTAATAATTCTA 17153 30 100.0 36 .............................. AAGAAAGAGAGAAATATATCTTATCATGTTGCTGAA 17087 30 100.0 38 .............................. AACAAAGTCTATTCGAGTGTTTTACATTTAGGTGGAGA 17019 30 100.0 38 .............................. TAGGTATAGCTTTTTATAATGTTTCAATCTATTTCTAA 16951 30 100.0 37 .............................. GAAGAAAATTTTATATGGCAGTTAAATGTTTTGGTGA 16884 30 100.0 38 .............................. GTGAGTGTGAATAATTGGACTTATGAAAGATTTATAAA 16816 30 100.0 39 .............................. TGAAATTGTTTCTAAAATTGAAGCTGATGATCTTCATAT 16747 30 100.0 37 .............................. GGAAACATTTTGTGTGTAACAGTATTTCCAGAGTCCT 16680 30 100.0 36 .............................. TTTAATAAAAGTTTTCCTCCATAGCTTTGAATTGCA 16614 30 100.0 37 .............................. AAAGCAGCAAAGATAACAACAGAATCTCGTCCTGTTT 16547 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ============================================================================================================= ================== 25 30 98.9 40 ATTTATGTATTTCTATATTAGAATTTAAAT # Left flank : AACTTATTGTCCAAGAATTTGAAGATAGATTAAAACAAATAATAACTCATAAGGACTTAAATAGAAAAATATCTTATCAATATTTAGTGAGGCTAGAATGTTATAAACTTATTAAACATTTATTAGGTGAAAAGAAATATAAATCTTTTCAAATGTGGTGGTGATAAAATGTATGTAGTTGTAGTGTATGATATTTCATTGGATGAAAAAGGTAGTCGGAATTGGAGAAAAATTTTTGGAATTTGTAAAAGATATCTTCACCATATTCAAAATTCTGTCTTTGAAGGAGAATTATCAGAAGTTGATATTCAAAGATTAAAATATGAAGTTTCAAAATATATTAGAGATGATTTAGATTCTTTTATAATTTTTAAATCAAGAAATGAAAGATGGATGGAAAAAGAAATGCTAGGTTTACAAGAAGATAAAACTGATAATTTCTTATAAAATTTATTGTCTACCTCTGATAATGTAAAATTACTGAAAGATTGACAAAAGTT # Right flank : TGTACTGACCCCAAAAAGTCGGACAAATTTAATTTAACTTACTAATAAGGATTGACTTCTGTAAGAAGCAGGAGTTAATCCTTTTAATTTTTCTGTTACTTTTTCTTCCTCTATAAACCCTATGCTTATCTGAGTTCCCTCTATATCGCTTTCTTTTTTTCTATTCCATATTTTTTCAAGTCAATTTTTGCAATGCAACTATTTTCAAAATTTTTAAATTTTGTATATCCTATTGGATTTCCTGTAAGACAATTATAGGTTTTCTAAATCTGAAATATCTTTCTTTAATTCATCAGGAATTTTAGATGCATCTGTTACTCTATAGATTGCTTTATATTTTTTCTTTTTTAAATTACAATTTCTACAAGCAATAATTAAAACATTTCCAATGTAATTTCCTTTTTCCTCAGGAGTAGTTCTTAGTATAGAAGATGGAGCATAATTACTTGTATTTTCCTCTTTTTTTATTATTCTAAAAATGATTGATTTTTTGTTTCTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTATGTATTTCTATATTAGAATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:90.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //