Array 1 34833-37482 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWEY01000148.1 Klebsiella pneumoniae strain CUS1 PROKKA_contig000148, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 34833 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 34894 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 34955 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 35016 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 35078 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 35139 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 35200 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 35261 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 35322 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 35383 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 35444 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 35505 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 35566 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 35627 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 35688 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 35749 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 35810 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 35871 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 35932 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 35993 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 36054 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 36115 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 36176 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 36237 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 36298 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 36359 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 36420 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 36481 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 36542 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 36603 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 36664 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 36725 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 36786 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 36847 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 36908 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 36969 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 37030 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 37091 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 37152 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 37213 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 37274 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 37335 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 37396 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 37454 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //