Array 1 201601-204308 **** Predicted by CRISPRDetect 2.4 *** >NZ_UJDC01000004.1 Klebsiella pneumoniae strain EuSCAPE_LU014, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 201601 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 201660 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 201721 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 201782 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 201843 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 201904 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 201965 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 202026 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 202087 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 202148 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 202209 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 202270 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 202331 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 202392 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 202453 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 202514 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 202575 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 202636 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 202697 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 202758 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 202819 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 202880 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 202941 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 203002 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 203063 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 203124 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 203185 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 203246 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 203307 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 203368 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 203429 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 203490 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 203551 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 203612 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 203673 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 203734 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 203795 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 203856 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 203917 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 203978 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 204039 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 204100 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 204161 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 204222 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 204280 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 45 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //