Array 1 2131-61 **** Predicted by CRISPRDetect 2.4 *** >NZ_WHMA01000003.1 Halomonas sp. NO4 Seq3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2130 28 100.0 32 ............................ ACGACCTCGACCGGGACGTGCGGAGCGCCACC 2070 28 100.0 32 ............................ TTGTCCTCCATCCGGTCCAAGCGCTCGAGCTC 2010 28 100.0 32 ............................ TGGTCCTCCATCCGGTCCAAGCGCTCGAGCTC 1950 28 100.0 32 ............................ TCCTCGGCCTGGCATCGCTTCTCGGAAGCTCG 1890 28 100.0 32 ............................ AGGAACTCGTGGCCATCGGCCTCGGCTTCCTC 1830 28 100.0 32 ............................ ACTCGGTATCGGCGCGGTTCATGACAGCACCC 1770 28 100.0 32 ............................ TGCTGCGCCTTCACGGCAGCCTGACCGTGACC 1710 28 100.0 32 ............................ TCAGCGACGACACCGCCGCCGTCACTCTCGAC 1650 28 100.0 32 ............................ TGCAGGTCGCCTGCGTCAGAGGCATAGATCGT 1590 28 100.0 32 ............................ CGCTCGCTCTCCCGGGGCCGGTAGTAGTAGGC 1530 28 100.0 32 ............................ TCGGAGCAAGCGGTGGGTGTAGAGTGGCTGAC 1470 28 100.0 32 ............................ TGCGCAGTGGTGCCCTCCTGTGCGCGGGTCAC 1410 28 100.0 32 ............................ ATGATGACCTATACCTTTGACGCCGAGCAGGT 1350 28 100.0 32 ............................ ACGCTCAGCTCGTTGACCGCCTCGCACAGGGT 1290 28 100.0 32 ............................ CGCTCGCTCTCCCGGGGCCGGTAGTAGTAGGC 1230 28 100.0 32 ............................ TCGGAGCAAGCGGTGGGTGTAGAGTGGCTGAC 1170 28 100.0 32 ............................ ATGCCAAGGCCGAGTTCTGGCGCGACCTGCAG 1110 28 100.0 32 ............................ CAGCGCCGACGGTGCCATTCAGCCCGCGCTAG 1050 28 96.4 32 ..............T............. TGCTGGAAGTGCAGCGTGCCGCCGCGCAGTCG 990 28 100.0 32 ............................ TGCTTGGCCGAGTCGGCACTATGCGTCACGTT 930 28 100.0 32 ............................ TGGAAGACGCCCTGGCGTAACCACCAAGCGCC 870 28 100.0 32 ............................ AGCCGGCGCGCTGTGGATGGCGGTCATCAGGC 810 28 100.0 32 ............................ TGGACGACGATACCCTCTACCTCGTCCAGGGT 750 28 100.0 32 ............................ GACGAGATCGCCCGCATTCGCGCCAGGGGCGG 690 28 100.0 33 ............................ ATTCTGGTCGGCGAGCACGTCGTGCGGGTGCGT 629 28 100.0 32 ............................ GGCTACGAAAAGCTGGGACCGCCTGACGAGCT 569 28 100.0 32 ............................ ACTTCGACAACGGCAGCCAGATCACGGTGAGC 509 28 100.0 32 ............................ TGCTTGATCGCCTCCCAGTCGTATTGATCGCG 449 28 100.0 32 ............................ GCGAGCTGGGCATCCGCATTCCCAAGGCGCGC 389 28 100.0 32 ............................ ATGGGCGTGTCGAATTTCACCCGCTACATGGA 329 28 100.0 32 ............................ ATCGACGAGGGGCGACTGGTCTACGACTACGC 269 28 100.0 32 ............................ ACATGCGCCGCCAGGACGGCACGCTCCTGCTC 209 28 100.0 33 ............................ TCCTGGAGGCGGGCCCGCAGCACTGGGAACTCT 148 28 100.0 32 ............................ TCACAAATGCGTTCGAAGATGCGCTGTGCATC 88 28 96.4 0 ............C............... | ========== ====== ====== ====== ============================ ================================= ================== 35 28 99.8 32 GTTCGCTGCCGCACAGGCAGCTCAGAAA # Left flank : ATCTCGCCTATGGCCTGGCGGCGACTGCGACTTGGGTACTCGGCATTCCGCACGGGTTGGCGGTGCTGCATGGCAAGACACGCCGCGGCGGCCTGGTCTTCGATGTCGCCGATCTGGTCAAGGATTCCGTAATTCTGCCCCAGGCGTTTCTTTCCGCCATGCGAGGCGATGAGGAACAGGAATTCCGTCAGGCTTGCATCGAGCGGCTGACGCGAACCGAATCGCTCGACTTCATGATCGATACCTTGAAGGATGTGGCGGTCGAGCTGGGAGGGCCAGGAGCATGAATGTGCTGCTGGTTTCTCAGTGCAGCAAGAATGCACTCAGGGACACGCGTCGAATTCTCGACCAGTTCGCCGAACGACGAGGCGACCGCACTTGGCAAACGCCGATCACCCAGGCAGGCCTCGATACGCTTAGGAAGCTCTCTAAAAAGGGAGGCGCTGCTCTATCAAACCATTGCTCTTTAACAATCAGTCGCTTACCTTTGAATCGTTCTA # Right flank : ATCGGTGTCAATGGCCATCAGAAGTGACCCACCAGCGGTCAACAAAATTGACCCACCCGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //