Array 1 1471-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_NHOZ01000119.1 Halorubrum ezzemoulense strain Ga36 contig0102, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1470 30 100.0 35 .............................. GGCGGCCCGCAGGGCCGGGTCAACAAGCCCCCGGA 1405 30 100.0 36 .............................. GGGCACTTGCCCCGTCGAGATCGCCTCGTCGAGTTC 1339 30 100.0 35 .............................. GACTTCCGGCCACGCACATAGTACAACGTTGCGTT 1274 30 100.0 36 .............................. TGGACGTACAGGTCGTACAAGCGTCCATCGACCGGA 1208 30 100.0 35 .............................. AACGCTGGCGCCGTCCTGCTCGAAACGACCGGCGT 1143 30 100.0 35 .............................. GGGATCCGCGCGCTCCCGTGTGACTACCCGGAGAC 1078 30 100.0 35 .............................. TCACGCCATAGGCGGCGGCGCGGGGGCGTCACTCG 1013 30 100.0 37 .............................. GACATGGTCGTAGCACGACCAGCCGGGTTAGAGCGCA 946 30 100.0 36 .............................. AACGGGACCGACATCGAGGGGGTTGGATCGCTCAGT 880 30 100.0 36 .............................. GACACGGCTGACAACGCGTACAACCCCGGAGACGTT 814 30 100.0 35 .............................. TTCTCACGTCATAGCCGGCGGTCGGCGGCGGCGCC 749 30 100.0 34 .............................. GTTGCGCCGGTGCGACTGCTCCGCGGGGAGGCGG 685 30 100.0 34 .............................. GGACAATACTGCTGCGGGAACCTCCCGATGCGGG 621 30 100.0 35 .............................. GCCTTACAGACACGCTCCAACTCGGCGAACACGTC 556 30 100.0 35 .............................. TCGGTGCGTTTATCGTCGTCGCGCTGGCGCGCGCC 491 30 100.0 35 .............................. AGGCCGATGCGATCGCCAGCGACGGCCATGTACTC 426 30 100.0 36 .............................. CGACTCGCACCGACTCGCACCGACTCACGCCGCCGA 360 30 100.0 37 .............................. GCGTACCAAGAAGCCGCCGACGAACTCCAGCACAACC 293 30 100.0 35 .............................. AGGTCGACCGGGAGCGTCACGTTCGACGCGTCGAT 228 30 100.0 35 .............................. CAGATATGCGTAGCGACACCTCCCCACGTGTCGTG 163 30 100.0 37 .............................. CCAGAACTCTCCTACCTCGCGGTCCGGCCAGCGCGGA 96 30 100.0 36 .............................. CGGGCACGCACCCGGGACGCGACGCCGACCGACGCG 30 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 23 30 100.0 36 GTTTCAGACGTACCCTCGTGGGGTTGAAGC # Left flank : ACACTCGAACGAACAGTCGAGCATCCGACGCTGAACCGGAAGGTGAGCTATCAGTATCTGCTTCGCTTGGAGGTATACAAGCTCAAAAAGCACTTGTTAACCGGCGAATCCTATGATTCGTTCAAGCGGTGGTGGTAGATGTACGTCATCGTCGTCTACGACATGGAGGCTGACAGGACCCACCTGATGCTGAAGCTCTGTCGCCGATATCTTGTTCATGTTCAGAACTCAGTACTGGAAGGGGAAATCTCGGAGGGAGATCTAGCGACACTGAAGGGGGAGATTGAAGATCTCCTTCAGGAGGGAGAGTCAGTCATGGTCTACGAACTCTCTTCGGACCGGCTATTGAACCGTACCGTGTACGGGGACGACCCGACCGAAGATAGTCGGTTCCTCTAGCTGATGTCGACCCCCAGGGGGTTTGGGGGGGATTGCGGGTCGACGGAAATGATGAAGTGTATTCCACTGGTAGAGGTGATATGGTGGGCAAAATCACCATG # Right flank : C # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGTACCCTCGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.60,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 23578-23222 **** Predicted by CRISPRDetect 2.4 *** >NZ_NHOZ01000085.1 Halorubrum ezzemoulense strain Ga36 contig0072, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 23577 30 100.0 36 .............................. GACCCGCACGTCGACGACGCCGAGGATGTCGACCCC 23511 30 100.0 34 .............................. AAGCCGCTGCTCGTCGTCGTGCGTGAACTCGGTG 23447 30 100.0 35 .............................. TACCGTAATCGCCCGGGAGCGACGGGTGTGTCTGT 23382 30 100.0 36 .............................. AAGATACGGGGCCTGTGCCGTCGCTATCGCCACGTA 23316 30 100.0 35 .............................. AAGGCGACGGCGCGGACGCACGCGGATGGGAACCC 23251 30 86.7 0 .......G..A.....T.....A....... | ========== ====== ====== ====== ============================== ==================================== ================== 6 30 97.8 35 GTTTCAGACGTACCCTCGTGGGGTTGAAGC # Left flank : CTCGTGGGGTTGAAGCGCCGCTCACGACCGACAGCGGCGACGTGCTACTAT # Right flank : GAGCCCGTCGCTCGGAGCTCGACGTCCGTATCCGCGGGTTTCAGACGAACCCTACATATCGAGATAGGGGCCGTAAGCCCGAAACGTGGGACGGTAGCTGATTATCATAAACATTGAATTTCAGTACCAGATTTAAATGCTTAGCAGATAGCAATTTTGTATGGCTGGAGTTCAAGCAATCTTGCTTGCTATCTGCTTCCCAGTTCTTGCGATAGGACTCCACGAACTGACCCACCTAGCAGTCGCCCGGATTGCCTGCCCGCTTTCGATTGAACAGACCTCGTGGGTCCCGTTCCGACTTCGCCTTGATTTTGAGAGACTGCCGGCAAAATCCACACTCCGGATGATTGCACTTGCTCCTCTATTTGTCGGCGGCGTGGCTGCTGCCATCGCTCTTCAAGTTGGAATTTGGCAACAGATTAAAATCGCTGATCCGTACTATCTCCATCATCTTATGATAGCGTACTGGTTCCTCTATATTATTCCCAGCCCTGCAGATA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGTACCCTCGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.60,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //