Array 1 8337-11530 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNDL01000027.1 Fervidobacterium changbaicum strain DSM 17883, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================ ================== 8337 29 100.0 42 ............................. TTCTCAATTCTGTCCTGCCTGAGTTTGTCACTCGGAATGTAT 8408 29 100.0 48 ............................. TTACGTTATTTTTCTTCCTGTCACCAAATTTTCTGGTATCTTGTCTTT 8485 29 100.0 41 ............................. TTGCACTTTTGTTGAGCTTATAGCTGGCTGGCCGTTGACAG 8555 29 100.0 40 ............................. TTTTTTTAAATATATTTATTATTTTTATTTTTTAAAATAA 8624 29 100.0 37 ............................. TCCATTCAACTTCACCCCCTTTCTATGATGTAAATAA 8690 29 100.0 35 ............................. TTCAAAGACTGAAGTTGTTGTTGAATTTCTTCAAT 8754 29 100.0 42 ............................. TCAAACCAAACCAAAAGCACCTTCTTCCAACGTCCCAATCAT 8825 29 100.0 39 ............................. TAAAGCCCTCCCTGCAATTAAAATAAATAGATTAAACTC 8893 29 100.0 39 ............................. TCTTTACGTTCACACTCTATCCCTCCTTTCCATTATACA 8961 29 100.0 41 ............................. TTTTCTATCATGGATATATAATTGGAACCACAATATTTTTT 9031 29 100.0 42 ............................. TATTTTGGTACTCCACGACTTCAAAGTTGCGTTTCCCATCAG 9102 29 100.0 41 ............................. TTCATACCGTCCTTGTAAAATCGTGTATGGTGCTATGTGAC 9172 29 100.0 44 ............................. TTTCCAGTATGCGAGGCTACCATCGGCATAGGAATTAAACCCTC 9245 29 100.0 43 ............................. TTCTAATTCATTGAGTGTGTTTTTTGCAAGGGTTTGTGCGTAT 9317 29 96.6 43 ..................G.......... TACTACCTTTGTAGCGATGTCGTCTTTGATTTCGAAAAATCTT 9389 29 100.0 36 ............................. TACATTCGGGGGTATGTTAACATACCATAGCGATGA 9454 29 100.0 44 ............................. TTTGCTTCTTGCCGTTTGATGTAGGTTGGGGTTTGTTTATATTC 9527 29 100.0 45 ............................. TTTTGGTACGTTCTCTCTTTCGTTCCCGCAGCGGTTGGTTATAAT 9601 29 100.0 39 ............................. TTTCCCGCAGCGGTTAGTTTAGTTACAATCTACGGTAGA 9669 29 100.0 45 ............................. TAAGAGCTTGGGGTCTTCCCACGGATAAACATGGAATATTCCACG 9743 29 100.0 43 ............................. TCATGGCTATATGGTTCCAAATAAAAATCTTCGACAATTTTTG 9815 29 100.0 33 ............................. TTTTTTTCAGTGTAACCGTTACCGCCTACCACT Deletion [9877] 9877 29 100.0 44 ............................. CGGTAGTTTTTGCTTAATCTTGTCTCGTAAACATACCATAAAAT 9950 29 100.0 42 ............................. CATTCTTCGTTTCCAGTTCGACACCTGCAAACTCAAAACTCC 10021 29 100.0 43 ............................. CCTTTAGGAATTTCACCGATTTTTTCGAGATACAGTCTTAAAG 10093 29 100.0 38 ............................. CATTGACCTTTTTATTCTTTGCGTTTTCTAACATCCAT 10160 29 100.0 42 ............................. CTGGTCTTTTATGAAGTCTGTGTGAATTAGTGGTCTCAATCC 10231 29 100.0 41 ............................. CTGTCAAGAGTATTTCTTTTAAAAACTTGCCTATTAACTTT 10301 29 100.0 40 ............................. CTTTTGGCACGATTAACAACAAAGCTGTCATCAATACTAT 10370 29 100.0 42 ............................. CTTTTCTTTTTCATTTTTTCACCCTCCGTTTCCTTTCATATT 10441 29 100.0 40 ............................. CTCGCCTGTTTTGATGTCATAAACTACATACTTATTTTCG 10510 29 100.0 44 ............................. CAACTCATAAGAGTCCAACGATTTAAACAGTTCCATTAGCTTCG 10583 29 100.0 42 ............................. CTAAGTGGACGGTTCGTAATATACAATCCCTTCTATTAGGTC 10654 29 100.0 44 ............................. CTCTTTATTTCAACCACTACTGGTTCATTATTCACTACTGCTAT 10727 29 100.0 38 ............................. CCTTCAACCGACAGGGGAAATAAAATTGCTCTTAATAA 10794 29 100.0 47 ............................. CACAAATAATTTGAACAACTTGTTCATCAATTTCTACAATGTCATAG 10870 29 100.0 41 ............................. CTTTCCTTGTCTACCTCTTCAGTAGACAAGGAATTTAAAAT 10940 29 100.0 38 ............................. CCTTTTACATACGTGTAGTCTCCATACGCTAACACTAT 11007 29 100.0 42 ............................. CAACCTTTACTAAAAGCTCATACCCTCTGTTCCATTCCATCC 11078 29 100.0 44 ............................. CTTTCTCCATTGTCTTTTCGGAATTCCAGTTCATAGAATTGTTC 11151 29 100.0 40 ............................. CAACCGCGCCAAGTTATCAACAAAAACCTTCGTATCAAAT 11220 29 100.0 42 ............................. CAAACACCTCGTCCCCTTTTTTAAAAACAACCCACTTCACAC 11291 29 100.0 44 ............................. CGTGCCTTCGCACGCTGACCGTGGATTAAATTCAACGGCAGCGT 11364 29 100.0 39 ............................. CTCGCCACTCAAACCTGTTTTTTCGAGCCTGCTCTATAT 11432 29 96.6 41 ....C........................ CTCTGAGCTTTCGTTCTGCCAGTTCGACCACCTATATATGT 11502 29 93.1 0 ...............G...........G. | ========== ====== ====== ====== ============================= ================================================ ================== 46 29 99.7 41 GTTTTAGAAGTGACTATGAGGGATGGAAA # Left flank : TAAAGAATTTGGAAAAACTAAAATTGTCTAAAATAAATTTTTATGCATTACATTGTATATTTATTATTAACATATAACTTTATATTGCATTTGTAAGATTGCATTTGTACTCAAATTCAAGAGTGTACTTACGCGAACGTTTATTCATTCGCTATAATAAATTGTTTTTTGTAACAGATTATAACTTCTATCATCATTTTTTATATAATAAAAACTTTTTAGTAATTTTAAATCAATACATACACAAAAGACAAAAAAAGAACACTCCCTCTTTTACTTCATACTGTGTTAACACATATTGGATATGCCTTAAAATACGATATGTTTGTAAAGATATTTGTAACTATTAAGTAAACAGGCAAAACTGTCTCTGTTTTCGAGCTCCTTGCTAAGAAACGAGGAAATCGAAAACACGCATAAATTGAAACTTTTCTATTGTTACGAATGTAACGTTGACTTGTAACAAAAAATATGATATAGTATTCATGCATATCTGACGA # Right flank : ATCTCAGAACATGAGATTTCTTAATGCAGCATAGCAAACCTACATTTCGGTTTGAGAAAATTCTTAAGCAGAACTGAACTCAATGATTAATATAGTGACAAGGTGTGCGCCTTTGGTACACACCTTTTTTTGTTTCTAAATTACAAGCAGCAGAGGGGAAAAGGTGTCGCAGAGATTTTTAGAGAAAATGTCCTGCTACAACTCGTACAATGTTTGGGATCGAGTAAGCTTGGAAATAGTTTAGTGATTCCTCAGGAAAAGCGTAGGAATAACAAGATTCAGTCAAATTTCAAAAATTCATTTCATCTTAGAAAGGTAAATGTGCTATAATGATATTGAAAATTACGAGTAATGTTTATTGTATCATTGCCCAACTTGTGGGAGATGATAACTGTGAGTTTCGTTACATTGTTGAGGAAAGATTTAAGGAAGTACATTGAATTCGTTCAGTCTGGGTTTATAACTCCTGGAGAAGTGTTGGCAGATTTCTCTCGTTTAGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTGACTATGAGGGATGGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 27736-31958 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNDL01000027.1 Fervidobacterium changbaicum strain DSM 17883, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================= ================== 27736 30 100.0 43 .............................. GATAAGTCTTGAAAGAGCGCTAACTTCACTCGCCATAAGCACA 27809 30 100.0 37 .............................. TGAAAAGACAAACAACCTACATACTCAAACTCTGAGA 27876 30 100.0 41 .............................. TCAAGGATATCCTGCCACTCTTTGTTTTTGTTATCCATACC 27947 30 100.0 39 .............................. GTAATACGTATATACGAATAAAAAAATACACGTTATAAA 28016 30 100.0 41 .............................. TTGGACTGTTAACATTCAGATTTATTAACGCTTTTTGCATA 28087 30 100.0 45 .............................. ATGATTTTGTCAACTTCTTCAGAACTGAGACCCAAAATCAATACG 28162 30 100.0 40 .............................. TTTTATCACGTGTATTTTTTCTTGTCAAGTCTTTTTTTCT 28232 30 100.0 33 .............................. TTTAGGATTGTAAGCAACACGATTGTTGAATAA 28295 30 100.0 41 .............................. GATGGCTATATGGTTCGAGGTAATAATCTTCGACTATTTTC 28366 30 100.0 44 .............................. GAAATGTATTACGTGTATTACGTGTGTAAAAAAAATAAAAACTT 28440 30 100.0 39 .............................. TTTTTCCATACCTTTATTCATCTTCTGCGCAACTACAAA 28509 30 100.0 42 .............................. CCGTCTATCACGAAAAACCTTCTCGCTGTTTTGGGTATCTCG 28581 30 100.0 36 .............................. TGTGTCTGCATCTGCCCATCCTGCACCCTCAAAAAT 28647 30 100.0 44 .............................. GCAAGTGTTATTGTCAATTCCGCATGTGCGGTCGCATCTCTTTT 28721 30 100.0 42 .............................. GCCTTACCATACCTTTCAACCCCTTTCTGATAAGTATTTTGT 28793 30 100.0 39 .............................. CCTTCTTGCTCTTACGGGTATCTCGCTTACATGCATTTT 28862 30 100.0 38 .............................. TCGAGTTTGCCAACAATAAAATCATATTGTGGATGAAC 28930 30 100.0 43 .............................. GGACAATAATCCCTCCGAACTCCTTGACTTTTTCAATTAAAGT 29003 30 100.0 41 .............................. TCTAAATACTCTAACACACGCTTATAAAACTTTTGTCGTTG 29074 30 100.0 41 .............................. ATATCCTGCAATTTGTAATAAAATTATCACCCCCAAATATA 29145 30 100.0 43 .............................. TAGAAATAACGTAAGTCATAGAAGATTTACCAATAGAACTTTG 29218 30 100.0 39 .............................. TGTAATATAGACCTCTGTACCTAAAATTTGTAAATTTGC 29287 30 100.0 42 .............................. TTTAGTATTGCCACTACCTCTACTACCTCCTACTACTACCCC 29359 30 100.0 40 .............................. TCTAGCATATATGCGTACAAAGCTGTTTGAAGGAGTGAGC 29429 30 100.0 33 .............................. TCTTAAATCCATTCGACCACCTCCTTTTGTCTC 29492 30 100.0 37 .............................. TAAAAGCAAGAGAAGGAAAATAAAAAAAGCAAAATCC 29559 30 100.0 40 .............................. TTAACAAACGCTTAGGCTTAAACAACTGCCTAAGCTCTAC 29629 30 100.0 36 .............................. TGTTTTTCATACCACAACATGAGCGACGTCTTATAT 29695 30 100.0 44 .............................. CTATAGTTTCAATCGGTAACATTTGTCCGTAACGTACTAACTTG 29769 30 100.0 41 .............................. CTGTAGCATGTACTCCACAGCTTGCTCGTCGTATTCGAAAT 29840 30 100.0 45 .............................. CAAAAATGTGACAGATTGACCTGTGCACAAGTCAATTAATTTTTT 29915 30 100.0 36 .............................. TTTTAAGCATTATCTTATTCCCAGGCACTGCAATAA 29981 30 100.0 36 .............................. TTTTATATCACTCTAACAAATACCCTTGTGGTATAT 30047 30 100.0 38 .............................. AAAACAACCACTAAACCTAAACCGTCACTCTGAAACCT 30115 30 100.0 38 .............................. CGTATTTGTTTTTGAGGTATTCAAATACACTTACTACA 30183 30 100.0 42 .............................. TATACCAAAAAGTCATCTTTTCCCGCACACTTAAACACAACC 30255 30 100.0 40 .............................. GTTGCCGTCCTCATCGAGTACCTGAACAGTGCCCTGGAAA 30325 30 100.0 41 .............................. CCCAAGAGAACCTAAACTTAAAATTATCTTTTTTTCTACCA 30396 30 100.0 39 .............................. TGAGACTGTCATACAAGTTGAGAAATTCATAGAACACTT 30465 30 100.0 40 .............................. GTACCCTGGGGTGAGGGTTATGTATTATGCCGTATTTATT 30535 30 100.0 42 .............................. CCAGGAACGTTTTCCCGCTCCCGGCTGGACCCCTTAAAATAG 30607 30 100.0 41 .............................. CTTCCAAATCGTATGTTACTTCGAACCATGTGTATACGTTG 30678 30 100.0 36 .............................. TTGATGAATAGTTCTGCTGTTTCAGTTGCTTTTGAG 30744 30 100.0 40 .............................. CATATTTACGAATGCTTTCAAAATCAAATTCAAAGTCTGC 30814 30 100.0 39 .............................. CAATCGTCACCGTGTTTTACTACTATGAAACTTTCGTCG 30883 30 100.0 40 .............................. TTCGAGGCACCAAAGATTCTATGGAAACGAACAACAACAA 30953 30 100.0 43 .............................. TGATAGCCTTGCCTGGGAAAAACAAAAAATTTTAAAAAAGGAG 31026 30 100.0 40 .............................. TTAAGAAATTCTAGTAATTTTGTAACTTTTTCAGGAGAAA 31096 30 100.0 41 .............................. TTGTAGCTTGTTCAGAGGAACCTTCAATCCAATTCCATGCA 31167 30 100.0 41 .............................. ACGTAATCGAGGAGTTTGTACTCGTCGAACAAATAATCTAA 31238 30 100.0 41 .............................. CCATCAACTTACCCAGCCGCATTGCGTCCGTTGGCTCTTCC 31309 30 100.0 38 .............................. CGGTAGACAAGAAGCCTAATATTACTTTTACTAATAAC 31377 30 100.0 40 .............................. CTTCAATCAACTCATTGACGTAGTGAACAACATTGTCTTC 31447 30 100.0 39 .............................. AAAGTAATCTCTTCGTCGTTCTGCGCAAAAACATAAACA 31516 30 96.7 39 .............................C AGATTTCCCCGTATGAGACTTCATTTTCCCAGTATGAAA 31585 30 96.7 42 .............................C CCAACCTTAATTCCCGTTACAATCTTCCGCACCATACCACTC 31657 30 96.7 40 .............................C AAGTTTGTGTCTGGGATGTTGTAATCACGCATCACCTCCT 31727 30 96.7 39 .............................C CTTTCGTTAGCATCGTTTGTTCTTCATCTAAATATACAT 31796 30 96.7 34 .............................C ACCGAGTTATCGACAATAAAAACTTTTAAAAACT 31860 30 96.7 39 .............................C CTGGATAAGGACCTGGTTATAGCCTTCAATAATAATTCG 31929 30 96.7 0 .............................T | ========== ====== ====== ====== ============================== ============================================= ================== 61 30 99.6 40 GTTTTAGAAGTGACTATGAGGGATGGAAAG # Left flank : TTCGTTTAAATAAAAGCAAATAACTCAAACAGGAAAACGCCAGTAGAGCAAACTGGCTTTTTTATTTTAGCATCATTCGTAATACATTTGTAATGTTTAATTGTGAGTCTCATTTGAAATATTTTATACACCAATAGCTATACGACTGTATGTAAAAACTATTATAAATAAAAGATGAAATTCAACACATCTAATCAAATACACGAAATGGAAACCTAATATAAATATTTATTTATACAAAAACAAAGATAAATACAACACATATTTTCACCGTGACTTCATATTTTATTAACACGAATCAAAGTAAATATAATTTGCGATGTTTTTAAAATACTGAATGTAACGAATATATTAACTCACAAAAAATTGCCGACTTTTGCCCCCTTTCCTGGAAGCATTGTTGAACCAACAAGCTGATAAATAAATACTTTCTGTTTGTTACGAATGTAACTTTCATTTTTAACAAAAATAGTGGTATAATATCTATGCATACCCTACGG # Right flank : TGCTTGCACGGTGACGCTGTGTTTTTGTTCTATTAAAGTAGGAAAGGCACTTCTCTCTGAAAGAGATGGAAATTTTCTCCGTTTGCCTCGAACCGTTGCAAGTACTCTATGTAGGTAGGAAAGGCACTTCTCTCTGAAAGAGATGGAAACGCGCAGGTCATATATCTGAAAACCTACACATTATCGGGGAATGTGGGAGTATGGCGTTCTGGCCGTACAGAGATATCGTAGCACTCAGCGGGCTGATTGCACTGGCTGAAAGTTACGGTGTGAAGTGTACGAATAAGGCTATAAGGTATTTGAAGAAGTTTAAAGATATTATCCCAATAGTAGAATTTGTGATTGATGAAGTAGTAAATGCTTTCCGTGAACCCAAGCTTTTGCTTGATACAGTGACTGATAAATACAACTATGAAATTCTTGCTTTGTTTGTCAGCACAGACGAAGAATTTGACGAAGCATATGAGAAGATACTTTATATTTGACTGAGATATTTAGAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTGACTATGAGGGATGGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //