Array 1 7317-6449 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZHJ01000016.1 Gilliamella apicola strain GillExp13 Gilliamella_apicola_GillExp13_contig112, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 7316 28 100.0 32 ............................ GAATGGTTTAATTGATTTGTGGGGTCAAAATT 7256 28 100.0 32 ............................ CATCGTTAACAAAGGTAAATACGGTATTACCT 7196 28 100.0 32 ............................ GCCTCAAGCGTCCAGTTCGAACTGGCGCACTT 7136 28 100.0 32 ............................ ATATTACGCCTCCTAAAAAGTACAATTACATA 7076 28 100.0 32 ............................ GTGAGCATTTTTTCGGGTTAAAACTTTAGAAA 7016 28 100.0 32 ............................ TCTGAAATTTCTGATAAACTGCCGAGCATTTC 6956 28 100.0 32 ............................ CACTTTTGAATAAATGCTTTGCGCTTGAGTTA 6896 28 100.0 32 ............................ ATTATAAGCCTTAGCTCTTCCGAGCTCTTTCG 6836 28 100.0 32 ............................ AAAACTCAAAAACAGCAGGACTTTTATCGTCC 6776 28 100.0 32 ............................ CGACACGCTCAAATCAATTGACGGTATGCCGA 6716 28 100.0 32 ............................ TGTATCGTGGTTCCCTTTGTTACCATTGCATT 6656 28 100.0 32 ............................ ACAACGCCCAGTAAGCGTGCTGAGGTTTATTA 6596 28 100.0 32 ............................ GTCGGAATTAAAAGGTCGAACAATTAAATTGA 6536 28 100.0 32 ............................ AATATGTTTCTGAATGTCCCTCGCCTGGCTAG 6476 28 75.0 0 .C.......T.......T.CCA..T... | ========== ====== ====== ====== ============================ ================================ ================== 15 28 98.3 32 GTTTACCGCCGAGTAGGCGGTTTAGAAA # Left flank : GCATCCAATAGCTCTTCTGAAAGCCCATCGGTTTTATAATTATGAAATTGATAGCTTACATGATGATCATCAAGCCAAGTAAAAGCTTTTTTCATCGTGTTGCAGTTTTTGATACCGTAGATGATATACATAGTAGGTGATCCAACATTGAAAATAATAGCAAAGATTATAACAGTTATCGGCTTGAAGCGGCAAACTAAAGCGATTTATTTGTATTAATTCATATTAATACTCATATTTAATCTTAGTTGTTAAAGCCAAATGGTTATTAGTGAAAGTTTGAAAATTTTAAATAATTTGGATGGTGAGTTAAGAAATGAATTTTTGAACAGATAATTTCACTCATTTTGAAAAGATCAAACTTGTGCTAACCCTTTTTTTTAATAATAAATAAAATAGAATAAAAACAACACACTAAAAAAGTTCTAAAAAAAGGGTTTTTAAAAGCAAAAATCCTATTTGTCTTTTGCGAAACAAGATTTATAGTATATCGGATTCTA # Right flank : TTAAAAAAGCCCTCAGACGAGAGCAATAGATGTCTACTGACAGAATAGCTGGCTATGGTTATTAGCTGTGTTCAAAAATTTTATAGAACACTTAAGCTAGTCATTAATAATCCATTATCAATAACATAAAATAAATATTAATCAATCAATTACAATATTTTTCAACAAAGTAACGCATAATTCGATTATCGGCGGTTAGTTCGGGGTGAAATGAGCAAACCAAAATATTATCTTGCTGTGCCATCACACAATGATTATCAATAAAAGCTAGCTGATTGACTTGCTCACCGGCTTTGGCTATATAAGGCGCACGAATAAATACTGCTGGAATTTGCTCACCAATATTTGGTATCTCTAACATTGTTTCAAAGCTGTTAATTTGCCGACCAAAACCATTGCGTTCAACGCAAATATCCATCAAATCTAATAATTCGACCTCGTTATGAGTTGTCGTTTTGCCACAGAGCACTAGTCCAGCACAAGTACCTAAGATTCCTTTT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACCGCCGAGTAGGCGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.20,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 13235-12366 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZHJ01000151.1 Gilliamella apicola strain GillExp13 Gilliamella_apicola_GillExp13_contig88, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 13234 29 96.6 31 ............................T TTTTGGGATGCTAACATTAAATCTAAATCGC 13174 29 100.0 31 ............................. TGATCGTGTAGAATTTTTTCAAACATTTTTT 13114 29 96.6 31 ............................C GATTCATCCACACCGGCAGCTTGATTTTTAA 13054 29 100.0 31 ............................. ACTTAACCCAATATTTTCGCATACAGGCTTC 12994 29 96.6 31 ............................T TTTCGGTTGGTCGATTTTCTTTTCTAAGCCG 12934 29 96.6 31 ............................G GTAAAGTGTCATCATCATGCGCACGCGCATC 12874 29 100.0 31 ............................. ACTACAACGCCGCCACGCGGCTGGCTAAAAT 12814 29 100.0 31 ............................. CACTCTCGCCGGTAGCTTTTGATAACATATT 12754 29 100.0 31 ............................. TCCTCCGATGAAGTTTAATGCGGTAACAATT 12694 29 100.0 31 ............................. TTAGCAGCAAAAGACGTTGCTTTCATTGCTA 12634 29 100.0 31 ............................. AAGTGTAGGACCAATTAATCCTGTTGGGTTT 12574 29 96.6 31 ............................C GCAATCCCGAAAAAAAAACCTGCTAAAAACA 12514 29 96.6 31 ............................T ATTTGGTTTGGGATTAATGATTGAACCTCAA 12454 29 100.0 31 ............................. TCTGTACCAGCGAGCCGATCGCTTCGTTCAA 12394 29 82.8 0 .......................TTTT.T | ========== ====== ====== ====== ============================= =============================== ================== 15 29 97.5 31 GTTCACCGCTGCATAAGCGGTTTAGAAAA # Left flank : TAAGATACCACGTTATCAAGATTTGCCAGCTAGTAAATTTGACAAAGCTATAGAGTGGTTGGGCGGTGTAAGTATGAGAAACTTTAAATCGATTAACATTGATAATCTAAAGCGTCAGTACAACTACTTAGCAACAATACAAGAATATTATTATAAGGTATTCGATTTATATAATGATGCGCTTTCCGATTTTCTAAATAAAAATAGCCCTGCTTTACATTATAGCTTTTCAACCGCGTTAAATAAGATTCAAGTAAATATTGGTTTATCACTTAATTTTATTCGCAGTGAAATAGATATTGGCTCAAAATCAAAAATAATAAACTTTGCGGCGGATATTGATTATCTAAGCTAAAAGTAGAAACACTACAACCCTTTTTTTAACTTGCTTTATAATTCATTGAAAAATATAGATTAATTTAAGCACTAGAAAAAAGGGTTATTTTGTGAAAATTGGTTAAATTTTAGTTAAAACAAAAGGCTATGTTTGATATAATCTA # Right flank : TGCACTTGGTTAATAAATTTCATACTATTAATCAAAATTACTTATAGGAGAATAGAGTGAAGAAACTTATATTAATTGGTTTATTTGGCTTGGTTTTAACCGCTTGTAGCACTGTGAAATATAATTATGTAGCTGAAACAAAACAAATAAGCTATCCCGATTTGAATGTTGTTACAAAAACCTTTATTGGCGACGATATGGTTAGACAGGGCACAGTAGCGTCAAGGGATGTTATTTATTTTCCTCAAACTACAGTTGTTAGCAGAGGGGTGGATTTTACTATTCATGCCGGAGAATACCCTAAAGTAGGTGAAGATCAAAAGTATCTATTTTTTGGTTTAAATGAGTTAAATTCTGGAGTAACAGTGGGTAAATCAACCTTTGCTGATTTACCTGTAGGGATTAGAACTAATAAAAAAGATAATGACCTATGCATTGTTACTGTTAGTGGTGGCTCTTTATGTAACAGTAATTCTTCATTTTCGTACCAAAAGAAAAAT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCTGCATAAGCGGTTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACCGCCGCATAGGCGGCTTAGAAAT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.70,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 15614-15045 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZHJ01000151.1 Gilliamella apicola strain GillExp13 Gilliamella_apicola_GillExp13_contig88, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 15613 29 100.0 31 ............................. CTGCGCATTTATCCTATTTTGCTCATACTGA 15553 29 96.6 31 ............................T CATGCAGATCACCAACATCACTAACATGCTT 15493 29 100.0 31 ............................. AGGCTTGCACGAGTGTACCCTTCTGGCTATT 15433 29 96.6 31 ............................T GACATTTTTGATTTGTCTGAACTTTCATCTG 15373 29 100.0 31 ............................. AGTTTCCGCGTGCGATACTTAATTTTTCGTT 15313 29 96.6 31 ............................T AATACAATTAACGCCGAACAACAACAGCAAA 15253 29 100.0 30 ............................. TTCAAGGTAAACAAGGCGATTGTGAATACA 15194 29 82.8 30 CG.......T.....A............G TGATTGCAAAATAATACGTTGTGCCATCAC C [15189] 15134 29 82.8 31 CG.......T.T...A............. ATTACTGATCTGTCGCGTTGAAACTCCGGAA C [15130] 15073 29 79.3 0 G..........AG.....A.C.......T | ========== ====== ====== ====== ============================= =============================== ================== 10 29 93.5 31 AATTACCGCCGCATAGGCGGTTTAGAAAA # Left flank : ACATTAATATTTCGTTTACTGAAGAATATAAAATTGAAAATGAGAAATTACATGTATTTGATGAGGAAAATAATAACTGGAAAGAAAGTGATGTAATTGATGAATATTCATGGAAACGTAAATCACATGAACAAGAAGATGTTAATTACATCTCTACAAACTCAATCAAAAAAGAATCACAAAATAAATTTACTATAACAGAAGAACATATAGCAACCCATAAAAATAATTATAAGACAAAAGTAGTAGCAACTTGCACAAGAATGAAATAGGTATCAATTATGTGGTTATTGTACGGTATTGCAATAATTAGTCAGAAAGTATATTGATTTTATCAAAGATTTTCTGGCGTTTTTTCAGCCTACTCAACAACCCTTTTTTTAACTTGCTTTATAATTCATTGAAAAATATAGATTAATTTAAGCACTAGAAAAAAGGGTTATTTTCGAAAAAATGGCTAAAATTTAGTTAAAACAAAAGGCTATGTTTGATATAATCTA # Right flank : GGTAAAGAAATTGCCATTCACATTAGCAAGGGTTCACCGCCGAGTAGGCGGTTTTTTATTGCTCTTAGTTAATAAATTTCATACTATTACCCAAAAACTAAGGAGAATGGTATGAAAAGAATTTTACTAATTAGTCTAGTTAGCCTAGCTTTATTTGGCTGTGAAGAAAAAAAAGTAACTGAGGAAATGCTTATTGGGGACTGGGAGTGTGGCGCAACCGAACAAAGAGCAAAATGGAAGAATGGGGTATTTCAAAACTATTCAACAACAATTGACTACGGAAAATCATTAGTTACATATTTCAAAGAAGATGACAATCTTTTTGTAAAAATCCCAACTAGTAAAGAAAAAATACCACAGGATTTCAAAAAATTGAACGAAAGTTACGAAGATTCTTTGGGTGACAGGAAAATAGTCGGATCCACCAAACTTGAATATATATCAGATAATGAGTTTAAACTTACTTCTGAGTCCACTAGAACGCAAGATAAACAAGAGGG # Questionable array : NO Score: 5.63 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATTACCGCCGCATAGGCGGTTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACCGCCGCATAGGCGGCTTAGAAAT with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.20,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 61748-62675 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZHJ01000028.1 Gilliamella apicola strain GillExp13 Gilliamella_apicola_GillExp13_contig123, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 61748 28 100.0 32 ............................ AGTTAAGAAAGAGCGTAAATATGCGAGAGCAG 61808 28 100.0 32 ............................ TCATATTATCAAATGCTCAAGAATGACAAAAC 61868 28 100.0 32 ............................ TTTTTTGCTCGAGCCTTTCATTAAGTGCTTAC 61928 28 100.0 32 ............................ GGTTGATAGTCCTATCTTTACTTTAAGTAACA 61988 28 100.0 32 ............................ AACCGCATCTGCAAATTTTTCATTAAGCTCAC 62048 28 100.0 32 ............................ AACCGCGCGGCAAATTAAAAGCAGTTTCAATA 62108 28 100.0 32 ............................ AATCCACTTCCCTGAAGAGATGAGCCTATTAT 62168 28 100.0 32 ............................ TATTGCCTGACAATTCAAATGTTACATTTAAA 62228 28 100.0 32 ............................ AACCAAGTTCTGCTGCAATATCTGATTTACTA 62288 28 100.0 32 ............................ GTCTTCTAACGTTTTGCCGTGCGATAAATACC 62348 28 100.0 32 ............................ AGATCCCGGTTTGATACGCACCGACGGAATTC 62408 28 100.0 32 ............................ GTTGCATTTTAGCCACCCTTGCGGCGGTGTTG 62468 28 100.0 32 ............................ ATCTGTGCTTAGTTTTGTGTAAATGTTTGTAT 62528 28 100.0 32 ............................ GTTAGCATCAGCAAACGAAAGCCCCAGCTCTT 62588 28 100.0 32 ............................ TCGTATGTCAGGTGGCGCAACAGCTTCCTATG 62648 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 16 28 100.0 32 CTTCAATGCCGTATAGGCAGTTTAGAAA # Left flank : AAAGCAGATATACAGCAAAAATCATCGATAAGTGATTATGCTTTATTGATGCCTATCACAACAGTACCGGCAACGATAAAAGGCTATTTGCATTTGAGTCGTGTTAATCCTAAAGGTCAGAGTGCGTTAAGACGTGCCGAAAAAAGATTAACAGCACAAGGTAAATGGACACCTGAAGTGAAAAATAAAATGGTTGAAAAATGGGGAAGCGTTCATTTGCAATACCCACATCTTCATTTGAATAGTAAAAGTACAGGACAAAGATTTATTTTGTGGTTAAAACAAGAAAAATGCCCAGAGCCAGTGCAAGGCACATTTAATAGCTATGGATTAAGCCAAACAGCCACTGTTCCTGATTTTTAAATCATTAACCCTTTTTTTGGGGATAATTTTAACATATTGATTATTATTGATATTAAAATAGACTCAAAAAAAGGGTAAAAATTGGGAAAAGTGCAGTATGCTCTTTTACAATAAGGCACTATTGAGATAAAATTCTA # Right flank : AAGAGTGTTTCTAGTTTTTATTAACTGAAACACTTCATTATTAGTATTATAAAGTAACTATTCTGCGCCAATTTGCGTGCTCATTTTTATCTCTCGATTATCGGTGATTTCTAAATTTGACAATACCACTAATTGAGGAAAGTTAGGCCTTAGAAATTGTGAAAGCATAGGTCTTAATGCATGGTTCACTAATAACACTGGTGGTGCACCGATAGCTTCTTGTTGATGAATGGCTTGTTTAATTTGCTCGACAATGTGTTCGGCTAGCCCTGGTTCAACATTGCTGGTATTTTGGAGTGCTTGTAATAACAAACGTTCTAAATTGATATTTAATCCTATTACATTGATTGGCTCAGATCCAGGAAACCATTGTTGTGTGATGACTCTTCCTAAAGCAATTCTTACCATACTTAGTAGCTGATAAGCATCATTTTGGGTTGGTGCGTACTCACAGATGGTTTCAATAATGGTACGCATATCACGGATTGACACTTTTTCAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCAATGCCGTATAGGCAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched CTTCACTGCCGTATAGGCAGCTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.70,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 7091-7599 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZHJ01000077.1 Gilliamella apicola strain GillExp13 Gilliamella_apicola_GillExp13_contig20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 7091 29 100.0 31 ............................. TTTAAATAGTGATAGACATCATCTAAATCCT 7151 29 100.0 31 ............................. TGTTATCCGCCTTGATTTTTTAAAATTAAAT 7211 29 100.0 31 ............................. AGACTTACCCGCTAGCAAATTTGATAAGGCT 7271 29 100.0 31 ............................. AGACTTACCCGCTAGCAAATTTGATAAGGCT 7331 29 100.0 31 ............................. CCCCACAATCGAAAACGCTGGAGCAAGCCCC 7391 29 96.6 31 ............................C GATACAATTAATCCAATTGCTGGTAAAAATG 7451 29 96.6 31 ............................T TAGCTCTTCCGAGCTCTTTCGTAAACATATC 7511 29 100.0 31 ............................. AGCATCCCCCCATCAATTGATTGTTTTATTA 7571 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= =============================== ================== 9 29 99.2 31 GTTTACCGTCGCATAGGCGGTCTTTTATA # Left flank : CTTATTATTTAATGGTTGTGGCATTAGTGGGTTTACTTACAGGCATAAAAATGATAGAAACTGCAAACCGCCCACTCCGCGGAGCAACGCCCGCAGCATCAGACAAGTCAGAGGCAAAAGAAATATTATCGGATCACTTTGACTCAATAGAACAAAGAGTCGAAGATATAGAACAGCAGATCGAAACATTACAACAACAGCGTCAGAATTTAGTCGATCAGCATCCTAAGTTAGATTGATCTTGTTATTTTTTAGGTTTTGTATGTTTTATTTAACATATAAAACCTTAATTAAATAAAATCAATATGCTATCTGAGTAATTTTTAGCGATAAAATTAATCCATTATAGAAATAGCTAAAACGCTGCCAACCCTTTTTTTTATTAATAAATTAAAGTAAATAAAAACAAAGCATTATAAAATAGTTACAAAAAAGGTTTTTTGAAAACAGAAATCCTATTTGCCTTTTGCTAGGCAAGGTTTATAGTATGTTGGTTTCTA # Right flank : ATAAAAAATAGAAATTTTTGTATAACTGTTTGATTTTAATAAAAAATAAAGAGTTAAACAAAATCAATGCTATATTTAAATAATTTTGTGGGAGAAATACATCTTATAACATGGTAAGGTTTATATGTTCATTTTTCATGACGCTTAGAATGTGCCAATAACTAAGTGAGGTTAGTGTGTCAAACAAAGATATTTGCAAGTTTGTACTTTGTTTGGAACATAAATTTGAACATCAAAGCAAAGTTAAGATAGCTTTGTCGAGGTGAGAACCATGGGGAATGAGGATATAAATTGAGCACATTTTGCAGCTAAAGCGTCGGTTGTTAGGTAACTCACTAATTCCTTGGTTTAGAAGTTATCACCAATATTTATTATTTCCACAAAAGTTAAGACTTACAAAACCTAACACTATATGCTAATTAAAAAATTGCATAAAAAAAACTAGTCAAGTTTTTTTAAAATGGTTATACTTTAACTCTCTAAAGGAATAGATTATTAAA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACCGTCGCATAGGCGGTCTTTTATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //