Array 1 249110-253037 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIUAK010000004.1 Klebsiella pneumoniae strain BD-7 4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 249110 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 249169 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 249230 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 249291 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 249352 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 249413 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 249474 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 249535 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 249596 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 249657 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 249718 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 249779 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 249840 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 249901 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 249962 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 250023 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 250084 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 250145 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 250206 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 250267 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 250328 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 250389 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 250450 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 250511 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 250572 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 250633 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 250694 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 250755 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 250816 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 250877 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 250938 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 250999 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 251060 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 251121 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 251182 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 251243 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 251304 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 251365 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 251426 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 251487 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 251548 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 251609 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 251670 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 251731 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 251792 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 251853 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 251914 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 251975 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 252036 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 252097 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 252158 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 252219 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 252280 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 252341 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 252402 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 252463 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 252524 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 252585 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 252646 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 252707 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 252768 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 252829 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 252890 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 252951 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 253009 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //