Array 1 22433-22706 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOLP01000019.1 Levilactobacillus andaensis strain 866-3 contig19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 22433 29 96.6 32 ............................C ATCTTGGCCGACTTATCGTAAGCTGTCGCCCA 22494 29 100.0 32 ............................. GTAATGGTTGTTAGCGTCAACGGGCTTGTTGA 22555 29 100.0 32 ............................. TTTACTCGTTCCTTTGGGGGATACATAGGGGA 22616 29 100.0 32 ............................. CGCGTCCAGGTGCTTAGCTTGCAGGCGTCCAG 22677 29 82.8 0 ............A.........A..GAA. | A [22699] ========== ====== ====== ====== ============================= ================================ ================== 5 29 95.9 32 GTATTCCCCGTGTATACGGGGGTGATCCT # Left flank : CAGGAGCGTTACCCACGTTACAGGTTTCGGATTACCGGATTTGGTCACCCAGATAATGCTCTGCATCAAGCCATGTGGCAGGGGATGACGCACCCAGCCGATAATTAGCTGGTCGAACGCCTTGATCCAAGGTTGCTGTAAAGCGACTCCGAATAAGTCAATGAGAAATAAGATGCCCGCGGCCCAAGTGAAGCGCCAGCGGGTTTTTGAAATGGTCGTCAAAGGTTGACCTCCTATATGATTATAATAATTTTAGTATAGCACAGTGTTTTAGTAGGGCTGAAATTGATTTTGGAAAATAATCTAGCGTGAGTCAAAGTCGTTTATCGATGAGCCAATTATCTGGCTATTTTAGTAGTTTAGGGGGCAATCTAACTCTTGTTTTTTTGGCGAATAATTGGTTGTTACTGGTGGGGTGTTCAGGTATGCTTAAAGTACAAAGTGAATGAATTAGCCGATTTTGGAAAATTAGAATGCCGGTATGTCAACGATTCTTTAGT # Right flank : TCCTATACCATTGCGTACTGATAGTATCTCTATTTCTCAATTCCCCGAATTATTCTCTAAGAAGTCGGCGTGACCCTTGCTTTTCCCTAGGGGGTTTGCTAAGATGAAAACAATCTGATTAGACAAAGACGTTGATGAGAAGTAGTAGTTCAACGGGGTATTCAGCAAGCGGATGGTCGCTGTGAATCCGTTATCCCGTGGAACGAACTTGTCTCTGAGTCTTCTCCGCTGCAAAGTGGGCGTTTGGCGACGTTATCAGCCGGAATGAGCCTCGGTACAAGACCGGGGAAATGTAGGTGGTACCGCGCTAACACGCCCTGCAGAAGTCGTTTTATGGACTTCTGGGGGCTTTTTTTATGGCTTGGCGTTGAAAATGAGAAAGGGAGCGAAAATTTTGGCATACAAACACCAAATTATTGAGCACAAGTGGCAACATTACTGGCGGGTCAACGAAACGTTCAAGACCCCTGACACTTCCAGTAAACCAAAGTATTACGTGA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGTGTATACGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.60,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 192970-190294 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOLP01000003.1 Levilactobacillus andaensis strain 866-3 contig3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 192969 36 100.0 30 .................................... CCCGTCCTTGTTGACGTAACTACCGGTTTG 192903 36 100.0 30 .................................... GGACGAATCCTTTTACTGGTATGACTAAAG 192837 36 100.0 30 .................................... ATTGAAAAAGGTAACTACAACAAGGTGTTA 192771 36 100.0 30 .................................... GCTATGACGTGCAGACAGTGAGAGACTTGT 192705 36 100.0 30 .................................... TTCATGTCACAGGCTTGTGACAGTTACTAT 192639 36 100.0 30 .................................... TTGTCGAACTAAGACCCTATGAGCATAGCC 192573 36 100.0 30 .................................... ATGCGTCGCAGAACACCCTTGGTTTTACCC 192507 36 100.0 30 .................................... CGAAGACCAAGGCGGGGGGCACAACCTGGT 192441 36 100.0 30 .................................... GCATTGGGTCTCTGGGGGCACCCTTGGCAC 192375 36 100.0 30 .................................... GCCGCCTTGATTGAAGCGAATCGTTTGTTT 192309 36 100.0 30 .................................... GATGCCCTGGCAATTCTGGTTGTGGTGTTT 192243 36 100.0 30 .................................... ACAAGCTAGTGCACATCGACGATGACATCC 192177 36 100.0 30 .................................... CGGCGGAAAGCTGTTTAGCCTTAGTTTCGG 192111 36 100.0 30 .................................... GCTAAAGGCGTCATCGACTGTAACAGGGTG 192045 36 100.0 30 .................................... TTTCTTTCTAGATGGGCAGCCATTCCGATT 191979 36 100.0 30 .................................... CCGCCGATGATGCCATCAAACTGGCTGTTT 191913 36 100.0 30 .................................... GTCAGTAACATTTCGATTGTCGTTGTTTTT 191847 36 100.0 30 .................................... TGACACTTACGATTATTGGCAAGTCGTTCA 191781 36 100.0 30 .................................... GCTACGCCAACGATTGGAAGCTCAAGCACC 191715 36 100.0 30 .................................... CCGATGTAGAAAAGGCTCCTGACGTAGAAC 191649 36 100.0 30 .................................... ATGGTCACGGTGGATAACGTGGACCAGTAC 191583 36 100.0 30 .................................... TAACTCACGGCTTTACCCTGGTTATCGTAC 191517 36 100.0 30 .................................... ATGGATGGTCTACCGGTTACGGGGATGGCA 191451 36 100.0 30 .................................... AACAGCGAATTCAAAATTGCAATTCCTGGT 191385 36 100.0 30 .................................... TAGCAATTAGAAAGTTGTGATAGATTCTAA 191319 36 100.0 30 .................................... AAAACTACGTGCCGCGCGCATGAACCTATT 191253 36 100.0 30 .................................... GCACTAGCGGCGGGTTCGCTCGCAACGAAA 191187 36 100.0 30 .................................... CCTTCACAATGGATGGCACGCCATCCCCGA 191121 36 100.0 30 .................................... TTTCGGATAAGCTATTATCCCTTGTCAAAC 191055 36 100.0 30 .................................... TCGCTTCCCGGCTGACTTACCAACAATTTT 190989 36 100.0 30 .................................... CGACGCCGGCTGGTGGGAACATCTTTAAGC 190923 36 100.0 30 .................................... CATATCGTTGTGCCATAAGGCATCCCCCTT 190857 36 100.0 30 .................................... TACTATAGTGTTCCTGGTGTCCAAACGCCG 190791 36 100.0 30 .................................... ATGGTTGGTCAATCGGCTACGGTAACGGCT 190725 36 100.0 30 .................................... TCGGCATTTATCACATCCCCGCACGCTTTG 190659 36 100.0 30 .................................... TCACCGAGACCGCGCCGTCTTACTTTCTCA 190593 36 100.0 30 .................................... GCGACATCGTTTTTGCCGGTCCCAAGACCC 190527 36 100.0 30 .................................... AAACGTTGGAACGTAAAGCTAAGGGCGACG 190461 36 100.0 30 .................................... CCGACGAACTGGAACGTCGCATTAAAAAAT 190395 36 100.0 30 .................................... GGATAGGGGCGTCCGACGACTGCATAGTAA 190329 36 97.2 0 ..............................G..... | ========== ====== ====== ====== ==================================== ============================== ================== 41 36 99.9 30 GCTTTAGATTAGTAGCAAATCAATAAGGTCAAGAGC # Left flank : ACGCTGGATTTGAATGCACTTTTCCAAAGAAAGCTACAAGCGAGGCTAATAGCATTGTTGGCAGATGAACAGGTCGTTCAAATGGCAGATGATTTAAGGGAATTATTATCACAACTGCTGACCGACAGTTATTTGATGGATGTTCCATTGGAGCTACCAGAGATACCGGAATTGGCTAAACTAGTTAAATTTAGCAATATCCAATTAACAGCGGATTTGAATGACGATTCTTATGCTATAATTGAGACACTAGTCAAAGTTCTCCTAGAGTTAAATGATCATAAATTAATTGCATTGACCAATGTTAGCCATTATCTCAGTAGCGACCAACTCCAACTGTTGGTGAGATTTATGGCGAATGTTGATTTACCACTTCTTCTAATCGAATTTTCACCTACTAAGCGAACGTCATATTTCAAAGGATGTGACTATCGCTTCATCGATAGCGATTTTGTTCTGTGGTAGAAAAATCGTTATGAGATATTAGTGTGAAAACATCG # Right flank : AGAGTGCACCTTTATGATTCGCGGGTGCCAGCTTTAGATTTAGAAGTGAACCAATAGGGAATAGGGTCAAGTTACCAAGTAGCGTTCCACTGTCTCGATATAGATTCTTAACTTGTCAGTAAGCATATCTTTCCCAAATATTAATAATCAAAAAAAGAAGACGATTATTCCTAAATCAAAAACATTAGGAATAAATCGTCTTCTTTTAACATCGCCACAAACCTAGCCACAATAAGGAACAGGCTTGCTGTAATAATACCCTTGCGTTGTTTGTGCATTGTATTGCTGGGCGAGCTTCACATCGTCTTGATCTTCGATTCCTTCAATGGTGAAGCCGAGTTGATACATGTCCGCAATTTTTCGCCAGCTATTGAGGCTACCAATCAGATCGGCTTGCCGGTGTTGCAGGCGGAAATTTTGCATGGCGAACTTAATGTTGTCCATGAAGGGCAGGACATCTTGAATCGCTGGACTCCAAGCGTTGTCGGTGCCAACGTCGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGATTAGTAGCAAATCAATAAGGTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 1 197926-196738 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOLP01000005.1 Levilactobacillus andaensis strain 866-3 contig5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 197925 29 96.6 32 ............................C CGTAAAGTTGATAATTTACAGTTGTCTGTTGC 197864 29 100.0 32 ............................. TGTTCGTTAGCGACACCGTTTTCTAGTGCGTT 197803 29 100.0 32 ............................. TGTTGAAAATTTGTTCTTGATAGAATTAAAAG 197742 29 100.0 32 ............................. ACAGGGCAGATGTTCACTCGCGCTTGGAATTA 197681 29 100.0 32 ............................. ATACGGCTACCCCAACCAAAGATACGTCTTTT 197620 29 100.0 32 ............................. ATCAATGGTGCCAACGGGTCCCAACAACTGTT 197559 29 100.0 32 ............................. AACCCCCTGAACTTCTGACTTGAGTCGCTTAG 197498 29 96.6 32 ............................C AACGACACGGTCACACAAGTTTTGCGAAAAAA 197437 29 100.0 32 ............................. GTACGAGTCAACGAGCGTGCCAACATCGACAG 197376 29 100.0 32 ............................. ATGTGTTTTATCAGAACTCTTGAAGGTCGAAT 197315 29 96.6 32 ............................C GGTGGTGTCATAATGGGCAAGCTCTTCCAATA 197254 29 96.6 32 ............................C AATAATAAGAATGTAAAGAATGATAAGAAAGA 197193 29 93.1 32 ........................G...C GATCTGACGGGATGGACGGCTGGCGGATCAGG 197132 29 96.6 32 ............................C AAGGTTGTCGGCGTCCACACGCGTACACAGAT 197071 29 96.6 32 ............................C AGGCTGAGTTGGATGCACGGATGGCTAAGCTG 197010 29 100.0 32 ............................. GATCTTTGATTCAACCGCACAAACCGGTGGTT 196949 29 96.6 32 ............................C TCAGCGATTTTTGCGTAGATGTCACCGTGTGG 196888 29 100.0 32 ............................. GTTAGTTAGATTGACGAACAGTGACGGCTGCC 196827 29 96.6 32 .......................A..... ACGTAGTCAAATTTTGTTTCCGGCTTGAAAGT 196766 29 93.1 0 ..G.......................T.. | ========== ====== ====== ====== ============================= ================================ ================== 20 29 97.9 32 GTATTCCCCGTGTATACGGGGGTGATCCT # Left flank : GTCAAAGATACGATCCTCTCGATTGGCGCGGTTAAACGGGACCAAGAGGACAAGATTGTACAGTTTGATCAACTGATTCAAGGGGTACAGAATGTTCCTGCGAAAATAACGGAGCTTACTGGTATTACCGCTGAAATGTTGGACAAGCAAGGCGTTAGTTTAGCTGATGGGCTACAAGCTTTACAAGAATTTGTCGCGGACGCGCCCGTTGTTGGTTACAATTTACACTTTGACGAAGGTTTCTTACTAGCCGCTTTTAGAAAAATTGGGCAGTCTAGATTGTCGAATCGGCTAATTGATTTGATGCCATTGGTAAAGAAGTCGAATAAGTTTTTGGACAATTACAGGTTGGAAACAGTTTTAGCGGATTATGAGATTGAGAACTTACATCCGCATCATGCATTATCTGATGCTCAAGCAACTTTCGAGTTGGCGAGCAAGTTAAAGGAAAAAGGGTTTTTTTGAAAAATAGGATCCCGGTGTGACGGCGTTTCTTTAGT # Right flank : CACCCGGATGGGACGTCACCAAGCATTGGAGACATTAAGACACTTTCTTCAGGAAGATGTAAGGGTGTAACACAGACACTAACTATTGGAAATAACGGTAGTATCTATTCGTATACGGGGTGCTCGTCTAAAATACCGAGTAGTAATCTAATTAACAAACTTATTAAAGCAGAGCAAAACGTGGGCTATTCCATTGGTGACACCATAGATATGCCATATACTAGATTTGGAAAAGAATATGGTTTTAAAGTTAAGAGGTTTTAGCAATGAACTGCTCAGAAATACAAAAGATACAGAAAGAGTGTCCACTTCCTATTGGTGTACGAGATGAAACTCCGTTTGTTAAAGTGACAGAACGGGTTACACCTGAGGAGGGTGCCCGAGAGATAGCTGACATTTTGGGTATTCCTTATGAACAGGCTCTTGCTGAAATCCAGTCCGATATAAAATCAGGAAAAATTAAACGATAAATTGATTGCACTCCTCAGCGAGTGTTTTTT # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.80, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGTGTATACGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.90,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 209211-207849 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOLP01000005.1 Levilactobacillus andaensis strain 866-3 contig5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 209210 29 96.6 32 ............................T AAATGACTGGCTTCAGCAACTGTCGCCGGATA 209149 29 96.6 32 ............................T AGTTCTGGCATCTGTGGCCTGGCAGCGGTTAA 209088 29 100.0 32 ............................. TGGTTGGGCAAGGTGGAGGTCAAGCGGTTGGA 209027 29 100.0 32 ............................. GACTAAGCGATTCTCATCTACCTGGAAGTCAG 208966 29 100.0 32 ............................. TTAGAACTGGCTAAGAAATTGATTTCCTTGGC 208905 29 100.0 32 ............................. GATACCGCGCAAGGCAAGGCCGAACCAGAAGG 208844 29 100.0 32 ............................. ACTTTTTATGACAAGGATAGCCACGCCACCAT 208783 29 96.6 32 ............................T AACAAGACCCGCTGGTCCACGTGGTTTACAGC 208722 29 100.0 32 ............................. GACCGGCCGTTGGTAACGATATCGACACCATT 208661 29 100.0 32 ............................. ATTTTGTCGTAATCCAGTGTCTCAATCATCGT 208600 29 96.6 32 ............................T TAGCAAGAAGGGCAGCAATTACACAATCTCAT 208539 29 96.6 32 ............................T ATATCCACTATTGTTGGCAATCTTTACAGCAA 208478 29 96.6 32 ............................T GCTAGACAGTGTGCTTACGTCAAGTGTGCTTG 208417 29 96.6 32 ............................A TTTCGGCCGGATGCCGTGGGATACCGCCGTAT 208356 29 100.0 32 ............................. AACAATCCCAACGTCAGCTTCCAGATGGTCGG 208295 29 96.6 32 ............................T AGACAATCTCCGGCTTGCCTTCGTTGCATTTA 208234 29 100.0 32 ............................. GAGCTTATCTCACAGACGTTGGCTGATAGTGA 208173 29 93.1 32 ...................A........T CAGGCTCTTAACACGAAGCCACAGAAGATGAG 208112 29 100.0 33 ............................. CTCTCCCGATGGCAGTTGCTGCGGCTTGTCACG 208050 29 93.1 32 ..................T.........T AATTAAGTCCCGCAATCCATGATCAGACTCGT 207989 29 75.9 22 T.C.....T............T..GA.A. CATACTTGTGATATAATCGTGT Deletion [207939] 207938 29 69.0 32 A.G......ACAAG.GT............ AGTGAGGGTGAACTTTATTTTATAGAGTGAAA 207877 29 65.5 0 A.......TAC.G..GT.........TTT | ========== ====== ====== ====== ============================= ================================= ================== 23 29 94.3 32 GTATTCCCCGTGTATACGGGGGTGATCCC # Left flank : TATCTCTAGGCAAGACGTCTTACAAATATTGTTATATCAAGGGATTGGTGACTACTAAGCCTTGTTGAACTATATGGAAATTAACTAGAAGTTTGGGCGTTGATTTGAAAAAGTAAAATAACCTTTGACAAACGCATAAATATCGTGTATAGTTACTTATCAGAGTTTAAGAGATGCTAATAACGTGATTCAGAGAGATTGGTTAGCAAGCCGGAGTTTCTTAGATTTTAAAATGGTCCGCCCGTTCAGAGGAACGGGGGGCCATTTTTTATGCCTTTTTTGGGTTCTGAGTAATAATGCTGATTTAACTGATATTAGTCGTAATGAGGATGGCTGATAAACTGAAATGTTTTGAGTCCATTGTTACGGAAATCTTCGCTATTGTTTTGGTGATAGGGTAATTGTTAATCATACATTGCTGAGGTATGCTAGAGAAGCAAGTTAAAGGAAAAAGGCACTTTTGGAAAAATAGAATGCTGATGTGACGGCGTTTGTTTAGT # Right flank : TTTAACTTGGTAGTACGGACCTTTTCATTTCAGAAATTGAGGCCTTTCTAGCAACGTTGCAGAGATATTTAGAGTAAAAACAAAATATGCCTACATATCACAAGCAATAGTGGTATTATAGGCTTGTAGAAATAAAATATAACAGTGATAGTGAACTTTATTTTATTATCCAGAGCAAATAGTGACTTTATATGTAACAATTCGTCCCAAAGATGGTTTAAAACCATTATTTATGAGAGGGGGAAGAAACGTTTGGTCCAAAGTAGGGCTCTTATTTGTGGAGAAAACCGAATTTTGAAAGATTCATTTTAAATATAAAATGAACACGCTTACAATTGAGACTTTATCTCAGCTTTACTTGTAAGCTACCACAAATGGTTTTATGTGTTTATTGTGTTGACGTAAAACGCTTCAAATTGTATCTTAAGAATAATGACAAGATATGTAGCTTTACAAACAGCTTAGTGAGAACGGAGCCATATAGCGTTAAATCAAGGAAA # Questionable array : NO Score: 5.59 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:-0.02, 8:1, 9:0.65, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGTGTATACGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.90,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [27-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 137310-138069 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOLP01000007.1 Levilactobacillus andaensis strain 866-3 contig7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 137310 28 100.0 33 ............................ TGAAGCTGACTTGGAAGAAATCAACCGGGCTTC 137371 28 100.0 33 ............................ CTGAGCATAGGAGGAAAAAACATGAGTGACAAA 137432 28 100.0 33 ............................ CACGTCATCCCCACCGCCATTGACGACCCAGTA 137493 28 100.0 33 ............................ TCGTGAAGGTTGGCAAATGCGTATTCCTTACCA 137554 28 100.0 33 ............................ CAAGTTGGAAAGCCTTTTGATAGCCAGGCCAAA 137615 28 100.0 33 ............................ TGGAGCGCATAGGCTTCCAAGTGAACTTGAACT 137676 28 100.0 33 ............................ CTTTCACCCGATTAAGTGGTTTAAAAAGACCAT 137737 28 100.0 33 ............................ TCATAGCCACCACCTCCCCATCCGTGTTTGTTT 137798 28 100.0 33 ............................ TTATGCTTGGGGATTCCTTGGTTCTATCTGTTG 137859 28 100.0 33 ............................ TTTCATTTTCCGCATCATGCGATACCCGTGGAG 137920 28 100.0 33 ............................ CTATCAGTTTGGCATGAATCTTCCCTTTGATGA 137981 28 100.0 33 ............................ TATCTATCTGACTCATCTTTCTTTGTCGCCGAA 138042 28 85.7 0 .........A...........TA...T. | ========== ====== ====== ====== ============================ ================================= ================== 13 28 98.9 33 GTGTTCCCCGTGTATACGGGGGTGATCC # Left flank : CGGGAACCCTCAAGGCGGACCAACGCATGGGCCAAGGCAATTACGCGCTGGCAGGTCACTATATGACCACCAAGCGGCTCCTATTTTCCCCACTAAAAGGGGTTCGCAAAGGAGATAGCGTGTACCTGACAGATAAGCGGCAGGTGTATCGCTACCGGGTCACGCGGGTCCAAGTGATCGACCGGCATAAAGTCGACGTCATCGACGATGTTCCCGGCAAAAAGCTGGTGACGCTGATCACGTGTAACTCGGCTAGGCGGGGCGAGCCCAAACGGCTGGTGGTGCAAGGTGAGTTGCAGTCGGTGAAGGCGGCTAAAGTGGGAATAAAAAGTTAGATGATACAATAAAGGCCCGGCATTTGCTGGGCCTTTATTGTGCAGCTTTTTTAGGTGCTAGGTTGGTTGTTAACATGAGATTGCTGATGTATGCTTTAGAAGCAAGCTAATGAAATTCACGTGTTTTGGAAATTAGGAATGCCGGCGTAGTGGGATTTGTTTAGT # Right flank : CAAAAAAATTTTCCACCATCCCAAGCCCTACCCATTGACTGTAACGTAACGTCATAGCTTACTATGAACGTTACATGAGGTCGAAAGGCAGGTGCTTTTTAGATGCAACAGGAATCGTTATTCTCAGGTCAGCCGCAAAATACGCCGTTGGCTAGTCGCGTGCGACCAAAGGATCTGGACCAGTTTGTCGGGCAGCAGCACTTGCTCGGAACCGGGAAGATTCTTCGAGAAATCATTGAAAATGACCAAGTCTCGTCGATGATTTTCTGGGGCCCACCGGGTGTCGGTAAGACGACCTTGGCGGAGATTATTGCGCGCAAGACCCAGTCGAGTTTTTTGAGTTTTAGTGCGGTTGATAGCAGTATCAGTAAAATTAAAAAGATTATGAAACAGGCGGAGTTGGACCGTGAGATTGGTCAGCGGACGATGGTGTTTGTCGACGAAATTCACCGCTTTAACAAAGCCCAGCAGGATGCGTTTCTGCCGTACGTCGAGCGCGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGTATACGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.60,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //