Array 1 1531845-1530902 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018192.1 Granulibacter bethesdensis strain NIH6.1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1531844 29 100.0 32 ............................. CAGAGGCGCTTTTCGACACCGGACCGGAGAAT 1531783 29 100.0 32 ............................. ATTCATCTCCATTATCTGATATGCGGTTATAA 1531722 29 100.0 32 ............................. AATACCTGTCGTGGCTGGCCTCGCATAGCCAG 1531661 29 100.0 32 ............................. GGAAGGTAAGTCTAACTGCTGTATGTCGGAAA 1531600 29 100.0 32 ............................. GACATGCTGCGCTGGCAGCTGACATCCCGGGC 1531539 29 100.0 32 ............................. GGACGATCGATATGGCCGATATCCTCGATCTG 1531478 29 100.0 32 ............................. TCAGGGAACGTGGGGAACGATTGTGCAGCGAC 1531417 29 100.0 32 ............................. ATTTTCCGACATCGCGGAAATCGATCCTGTTT 1531356 29 100.0 32 ............................. ATGCGCTTGGTGGCGATGCTGCGGCTCTACTG 1531295 29 100.0 32 ............................. ACTGAAGCGTACAACGCTGGTGGCACGGTGCG 1531234 29 100.0 32 ............................. GGACGGGCATCCCAGAACATCATGCAGATTCT 1531173 29 100.0 32 ............................. TTGCTTCACTCGGTTCCCACTCCCACATCGGC 1531112 29 100.0 32 ............................. CGCTCGATGCGGTGAGGGTCTTCGATGCGGTG 1531051 29 100.0 32 ............................. GGGCCAGCGTCAGGGACAGCGTCTGGGCCAGC 1530990 29 100.0 32 ............................. CAGTCAGTCAGCCGATGCCGACCTTAATCGCC 1530929 28 86.2 0 .....T.......T......-...T.... | ========== ====== ====== ====== ============================= ================================ ================== 16 29 99.1 32 GTGTTCCCCGCCTGCGCGGGGATGAACCG # Left flank : TCGGACGGGACTTCTTGGACGTATTATTCCCGCGATTGAGGAAGTTCTTTCCGCTGCGGACCTTCCCCGTCCCGAGTCCCCACTCGAGGCTGCCCTACCCGCTTTTGACGAAGAACAGTCTGGCGATGAGGGCCATCGCGGATGATGGTTGTGGTTGTCACCAATGTGCCGCCACGCCTGCGCGGCAGACTTGCTGCATGGCTGGTTGAAGTGAGGGCCGGTGTGTATGTTGGCAACTATTCGGCTCGGACGCGTGAAATGATCTGGCGCCAGGTGACGGAAGGTCTGGAAACAGGCGACGCCGTCATGGTGTGGAAGGCATCAACGGATCAGGGATATGACTTCCTCACTTGTGGTCGCAACCGCCGCATGCCGGTTGATTTTGATGGGCTGAAGCTTGTAACTTTCCTTCCCGAAAAGTCGGCTTAAAAACCTCTTTTTCTGTCGGTAAGATCTTTGACAATGTAAAAACAATTTTGAATCAATAATTTACACGAAGA # Right flank : AACAGCCTATAGTCATATTGGGACGACCCGGAACCACGGTGTATCAAGGGCTGCAAGGTGGTGTGTCCGGGAGGGTTCAATTGGGAAAGCGTGCGGTTATCTATCGCCGTTTTCCACGGTCGATCAGGCCTGCGAGCGGCAAAAGGACGCGCTGAAGCAGTTTGCTGAACGCGTAGGCTATGAAGTGTAAGGCATCTTCATGGAGACAGGCTATGGCGTCCGGCTGGATCGAGTGGAGCGTTGAAAGGCGATCAGCCACGCCCGTGAAATTGATGCCATTCTGGTGAAGGAGCTATATCGCTGGGGACGTTCGATCTGCATGATTGATTTCTTTTTGCTGAGCGAGCGCCGGATGGTGTGGATCGCGCAGCATTTTCCCGTGGCTCATGGTTTCCCCGCCTTGATGACCGCCGGGGCGTCAGCAGTATTGTCTACGTCATCAAACATGGCTTGCAATGGAAGGATGCGCCAAGCATCATGCTGCTCAGCAAAGGTTAGAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCCTGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCCTGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1541871-1540743 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018192.1 Granulibacter bethesdensis strain NIH6.1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1541870 28 100.0 33 ............................ CATCCCCGGCGGTCGCGTCGGCATTATTGGCAG 1541809 28 100.0 34 ............................ GCGCCAGCGCCATGATTCTGCGGGCAATCAAACG 1541747 28 100.0 33 ............................ ATACGCTGAAAATCCTCGGCATTCGCGCTTTTG 1541686 28 100.0 33 ............................ CGTAGGAGCGATCTACGCCGCCCCTTTGTGCTC 1541625 28 100.0 33 ............................ TCCACTCGTCGCCTACCTGCGGCTCTATTGCCG 1541564 28 100.0 33 ............................ CGGATATTATTGTTTCGGCTGTGGGGCGAAGGG 1541503 28 100.0 33 ............................ CTGCAACCCCGCGCCCTCCGCCAGACGCGACAG 1541442 28 100.0 33 ............................ CCGCGCGGCGCTGGGATTGCTGGGCGGCAGCGC 1541381 28 100.0 33 ............................ GCGCTGGCTGCGCCGTATCCATCTCGCCGGGAT 1541320 28 100.0 33 ............................ TCGTGTGCGCGCTCCGTCGTACCACGCGATGGC 1541259 28 100.0 33 ............................ TGGGGTGCACCCCAAATTGCATGGGATGAGGCG 1541198 28 100.0 33 ............................ TGTGGTCCCGATTTCCAGAGGCTGTGGAAGGGC 1541137 28 100.0 33 ............................ AAATGGGGCCGCTGTAATACGGCCGCCATTTGA 1541076 28 100.0 33 ............................ CCAGTTCGGAACCAGTTCCCCACCAGTTCGGAA 1541015 28 100.0 33 ............................ CTGAGTCCGCCTCAGAATTCAGAGCCGCATTAG 1540954 28 100.0 33 ............................ CTGTGGGACGAATGGACCCGGGTATCCGATGCG 1540893 28 100.0 33 ............................ TCTTACCAGTCCTGGTTTCGGCGCATCCGGAGG 1540832 28 96.4 33 ..........................T. GTGCCGACACGATCCGCCAATGCCTGCTGGCTG 1540771 28 100.0 0 ............................ | T [1540745] ========== ====== ====== ====== ============================ ================================== ================== 19 28 99.8 33 GGTTCCCCCGCGTATGCGGGGATAGTCC # Left flank : TTGATGCCGCAGCCTGCCCGCTGGAACGGGCTGACATGGAACTGGTTGAGGTGGCGAGGGCCGTCATGCGGCAGCATTATCGCCCATTATGGCATACGGTGGCGGCTGCTTTGCGGGATGCCAATGGCCGTATATGGACTGGCCTTCATCTTGGCGCGACGGTGGGGCGTTTGCAGATTTGCGCAGAAGCGATTGCATTGGGCCGGGCCAAGCTGGAAGGGGCGGCTGACATCGAAACGGTAGTTGCCGTCCGTCATCCCAAACAGGATGAAACCGATCAGCATATTGCCGTTGTCTCCCCTTGCGGTGCATGCCGGGAGATGTTTGCGGATTTTGCCCCTTCCACCATGGTCATTGTTTCGGGGGAGCAGGGATTGATCAAGGTGCCGCTTTCCCTCCTCCTCCCCCTTCCTTATCGGCGCTGAAAAAGGCGGCTTGCATTTTTTTTAAAGTATGGAAAATGGAGATTGATCTTTGAAATCAATAACATAAGGTCTAGA # Right flank : GAAAATCGAATATGGTCAGCCCGACCTGAGCATGCGGCGCCAGACGGCGGGAAAATAGTTGATCAGCTCTCGGAGAAAGGTCTGCTTTCCAAGCTTCGCTCAGGACGGAGCAATTATTAATATCAACGCACCTTTAGTCCGCCTCCTTCTCGAAGTGGAGGGTGGTGCATGATCTGTTTTTAGACCGTATGGCATTTTACGTATGAACCATGTTGAGATTTAAGAAGCTGTCTCCTGGATTGCCGAAGCACCTTTTAATCCAGTGCCTGTGATAGTTTCGTAATTTTTACCTATCCATGAGATTAAACATCTCCGGACAGTTAAGTTGATGGAGCTGCGCAATGCAGTGGAAAAACTGGCCGGGTAAAAGCTCGGCCACTCCGGATGGTCCTGAACATCCGGCAGCCTTTCATATGCTTGATGTTGCTGCGGTGGCGGAAAGGCTGATTGAGCCATTCGGCATGGCACCTCCCCTTCGCGATGCGCTGGTTGTGCTGGCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCGCGTATGCGGGGATAGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 3 1844015-1842278 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018192.1 Granulibacter bethesdensis strain NIH6.1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1844014 28 100.0 33 ............................ CCGCCCTGCGCGGATCAACGCGGCTTGCTCGGC 1843953 28 100.0 33 ............................ TCACCGTGACGGAACACCGGTCTCGCTCAGCGA 1843892 28 100.0 33 ............................ CTCAGATTGTGTAGACCAATCAGATTTATGCGT 1843831 28 100.0 33 ............................ CTTGGCACTTTTAGGTCCCGCCTTGATCCGGTT 1843770 28 100.0 33 ............................ CGTTGACAGGACGGCCCATTGACTGGACTCCGG 1843709 28 100.0 33 ............................ TGGCTTCACTGCGGCGGGCGGAGCGACGGTCAT 1843648 28 100.0 33 ............................ CCACGGATTGTCTTGCCAGCCGACTTTGATAAC 1843587 28 100.0 33 ............................ CGGCGTTTCAACAAGCTGTGGTTCAACAGGCTG 1843526 28 100.0 33 ............................ GCCATCTGGCTGATCCCAAGGCGATACGGCTGT 1843465 28 100.0 33 ............................ CTTATTGATTTAACTGGCGTTTTTTAACATCTC 1843404 28 100.0 33 ............................ TGTCAGAAATAACGGATAGAAAATCACCGCCAT 1843343 28 100.0 33 ............................ GCACAGTCGGGACAAGCGAAAAGCCTCTGATTG 1843282 28 100.0 33 ............................ ACGCCCGGGCCTGTCCCGTGTCCCGCTGGTGCG 1843221 28 100.0 33 ............................ CGATATCCGCCTCGCGCCGCTCTGTGCCGTGGC 1843160 28 100.0 33 ............................ TATTGGCCAGCCGATCCATGTGCCCGCGGTGAA 1843099 28 100.0 33 ............................ CGTTGGTCGCGGTTCGGAGTCTCAGTTCAGTAT 1843038 28 100.0 33 ............................ CCCAGCGGCCCTTTGTGGCCGCCGGAACTCGCA 1842977 28 100.0 33 ............................ CGCGGCCAGCATCCTAGAGGCCGAGGGTCTCCC 1842916 28 100.0 33 ............................ CGCAGGGGCTGAAGAGGGGATCACCCATTGGGC 1842855 28 100.0 33 ............................ GTCCTGCGGAAATCGCCAAGGAACAGCAATCGC 1842794 28 100.0 33 ............................ TTTTGTGTTCATTGCTGTTTGCGACCAGAGCAA 1842733 28 100.0 33 ............................ CGGCGCGTATATTCCGTCTTTGCTCCCCACGCC 1842672 28 100.0 33 ............................ GCCGCCCTGTGCGGCATTGGCGTTGTCCATCAT 1842611 28 100.0 33 ............................ CTAGGCAGCACTGTCACGAGCTTTCATCCCTGC 1842550 28 100.0 33 ............................ CCGCCGAGGCCAGCCAGGTGATGGAATCGCCGG 1842489 28 100.0 33 ............................ CCACAAAGGCCGCGGGAAATCAGCGCTACCGTA 1842428 28 100.0 33 ............................ TGTATTGCAGACAAGCACTCGCGGAATTCTAAG 1842367 28 96.4 33 ............T............... CTACCCACAGAAAAACACCAAGGACCGCCGCTT 1842306 28 89.3 0 .............GG...........T. | A [1842284] ========== ====== ====== ====== ============================ ================================= ================== 29 28 99.5 33 GGTTCCTCCGCGCACGCGGAGATAGACC # Left flank : GAACTGCTGCGTCCGGCCTGATGTTTGAAGAGAAATCCCTTTTCGGTCTGGCTTTCAAGATATCAGGCTGTTGTCGGCAATGAGAGGGAAAGGTCTTTCTGCACAAAATCGATTGTGATGTCAGGATAATAGAACGGATTATTTAATATATCCTTGCACAGCCTGCGCTTCATGCAGTTCGTCCGGGCGTTGCTCCATCAATGATTGCCAAGCATGTTCTGGATGTTTCGCTGAGGGCTGTAGCATATGGAGAGCCCAGTCTTCTCATGCCCCTTTTAAATCCTGCACCTGTTGCACAAGACGATCATACGCGTCTTTAATTCTGCATGAAGAAGTGTGAGAGAGGCAGGGTTGGTATATCTCCTGGCCTGGTTCTGTTCCGATTGTGATGCTCCGAAGGAAATCATTGGTGCCGGTGGAGCACTGGTTCAGAGAAATTAATTTCTGAAACATAACGTTCTTTGAGATTGTTAATAAGTATCAATGTGTTGTAGGCAAGA # Right flank : TTCCGCATCGTATCGATCGCTACTCCCCTTCCGGGGCTGTGCAAACAGCCCCCCGGCCTGATACACCCGGGTGCATGGATGCACGCCCGCTCGATCAGGTAACGGATCAGTCGCCACCCCCACACTCTCCACTAAAGCGGAGAGGTAAAGGCGCGCGGAAGATCAACGTGGAGTTGGAGCCGACTGCCCTCGCTATGATGGGGCGGCTGTGGCGGGAGCATATCGCGCATCACCGTGTTCGCATGCTGGTGGTGATCCTGCTGACGGCACTGATGGCGGGCAGCACGGCGCTGTATCCAGTAGTGATCCAGCATGCAATCGACCTGTTCAACGCCCGTGACCGGCGCATTCTGTATCAGATTCCGGTACTGGTGCTGATCGTCACCGCCCTCAAGGGCGCGGCGATGTATGGGCAGACTGTCTCCATGCAGCAACTGGTGCTGATCGTCATCAGGGAGTTGCAGGAGCGCATGTTCAGCCACCTCGCCCATGCCGATCTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCTCCGCGCACGCGGAGATAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.00,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA // Array 4 1927031-1929132 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018192.1 Granulibacter bethesdensis strain NIH6.1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1927031 28 100.0 33 ............................ CGCTATTGCTCAAATATTGCGTATCCCACGGTG 1927092 28 100.0 33 ............................ TGTCACCATGACAGAGCTGTCAGCCCCGCCAGC 1927153 28 100.0 33 ............................ CGCCGGTCACGCGGCGGAGGCTATCTATGCCGC 1927214 28 100.0 33 ............................ CGGGATCAGAATCTCACCACCCACGATGCGGGT 1927275 28 100.0 33 ............................ CGGTTATTGATCGTGTGGAGTGTCATGTGAGCG 1927336 28 100.0 33 ............................ TATTGCGTATCCCACGGTGTATATTTTAGTCGG 1927397 28 100.0 33 ............................ TTCAGACGCCCGCTTACTCTGCGATAGATCGCC 1927458 28 100.0 33 ............................ TCTCCGTAGAGAGCCAGAATCCGTCCGGCGTCG 1927519 28 100.0 33 ............................ TCAGGATCAGCCTGCCGCAAGACCCGGGCCAGG 1927580 28 100.0 33 ............................ CCCTGACTTCGCGGGCATCGGAAGCCGGTTTTT 1927641 28 100.0 33 ............................ CTGGGTCAAAAAATGCGCTTGCAGGCACATCTA 1927702 28 100.0 33 ............................ GTGCTCGGCATGGGCAAGCTCGGTGCGCGGGAA 1927763 28 100.0 33 ............................ TTTGTCACTTACGGTGACACATATTCTGTACCG 1927824 28 100.0 33 ............................ CGCTACAGCGTCGTCCTCTGACAGAGATGACAG 1927885 28 100.0 33 ............................ CTGGTCATTCAGGGCGCGGAACTCGGCAGCCAG 1927946 28 100.0 33 ............................ TTCCGCCGCCTGATCACGCGTGCCATTTCTCTG 1928007 28 100.0 33 ............................ CGGTGGTCAATAGGCGATCGCGCGTTACGTCGG 1928068 28 100.0 33 ............................ CCACTTGGTTACGTTGGGGGGTCCATCCTTGGA 1928129 28 100.0 33 ............................ TGCCAGAAAGCATCGCAGATGCTGCCAATCCGC 1928190 28 100.0 33 ............................ CGGGCATCACAGAGAGGGTCACCTAGAAAATGA 1928251 28 100.0 33 ............................ TGGGCGTCGCAGGAAAATGCCTCCCATACCGAC 1928312 28 100.0 33 ............................ CAATAGGTGGGATCGTATTGATGCAGACACACG 1928373 28 100.0 33 ............................ CACCGGAATGGCGCGCTACCTCCGGACCGCGTC 1928434 28 100.0 33 ............................ TACGATCCCACCCTATTTGCGCAGTCTATATCG 1928495 28 100.0 33 ............................ CGCTTCAGAGCGACTTTATGACGCCTTCCCAGT 1928556 28 100.0 33 ............................ CATGCTCAAACAGAACTGGGACACGGTTAAATG 1928617 28 100.0 33 ............................ GTGAGCTGGCCGCCGTCATTACGTCTCTCACAC 1928678 28 100.0 33 ............................ CCCACCCATCGACATCAACCCATTGCCCATTAG 1928739 28 100.0 33 ............................ CGGCATGATGAGCACCGTGCAGACCCGTGTAGA 1928800 28 100.0 33 ............................ CAAAGCATGATCGTGAAGGCGGCGTCCCATTCG 1928861 28 100.0 33 ............................ CGAAACGGGGGCATAAGTGGTTGACTTTTTTGA 1928922 28 100.0 33 ............................ TGCGTCACGTATGTAGGAAATATTCGCTATCCG 1928983 28 100.0 33 ............................ CCTCGTGCACTGCCCAGCTAACTACTGCAGCCA 1929044 28 100.0 33 ............................ TCGCTCTTCTTTTTTGCAATCGTGGATGGCGCA 1929105 28 92.9 0 ..........................TT | ========== ====== ====== ====== ============================ ================================= ================== 35 28 99.8 33 GGTTCCTCCGCGTGCGCGGAGATAGACC # Left flank : TGGCCATGAAAATATCGAACGTCTCACCCGACGCCAGACTGGACGCGTTCTGGCAGAGCGCTCCGTCATTCCAAAAATGATCGAGCGACTGAAACAGCTTTTCGAAAAAGAAACGGAGGCCATCCCCTTTCTCGAGGATGATGAATGATGCCGGCCACTCTGGTCATTACAAAAGATGTGGAAGCACGATATCGTGGCTATCTGACCTCGATCATGCTGGAGCTTTCTGCTGGCGTTTATCTGTCTCCGCAACTATCCTCGGCGGTGCGTGAGCGCACCTGGGCGGTCCTGTCGGAATGGCATTCCGAACTGCGCCGTGGTGCCATCGTGCTGGCATGGCCCGATGCCAAATCCCCCGGAGGCATGGCAATCCGCACCCTTGGCGACGCCCCCAAGGAGATTATCGATGCCGACGGGGTGCTGCTTGTTCGGAAAAGTTAAGCTTTGAAACATACCGTTCTTTAATATTGTCAATCAATATCAATGTGTTATAGGTAAGA # Right flank : TCTCGGCAATGTCTGCGAGATGGCGGAGAGGGTGGGATTCGAACCCACGGTACCCTTTAGGGGCACAACGGTTTTCGAGACCGTCACCTTCGGCCACTCGGTCACCTCTCCGTTCGGGGTCTCTTAGAGCAGGCGAAAGCCCGCGCCAAGAGGCTGTAGCAGAAAGATGCCCCCTTACGTTCCTGCCCAGTTCCGTCCGGCCCGAGTCCGAATCGAAGCCACGGTAAGCGAGGGGCTCTCTACCCGCTGAGCAAACAGCTCCTCCGGGCTGCCAGCACGGCAGATATGCCATGAAAATGGGAGCCATGCCGTAAGGAATGTTTGACTTGTGACGTGTGACCGGTATAACCCGCGCCTCTCGGCCGCCGTGCCCCCCGCTTGTTGGGGCGTTCGGAGGCCGCTCGGCGTTGACGGGATGGCTCCGTCGTCGCGGAGCCAGCATTTGGGACCAGAAGCGATGTTCGCAGTTATCCGCACTGGCGGAAAGCAATACCGTGTTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCTCCGCGTGCGCGGAGATAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.60,-10.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //