Array 1 113185-108273 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBFD010000007.1 Geobacter anodireducens strain PheS2 Geo-1_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 113184 29 100.0 32 ............................. GTTGGAACGGTTGGGTACCGTGGACACCAGCG 113123 29 100.0 32 ............................. ATGGTCGGGAAAAACTTTTTCATATGTCACCT 113062 29 100.0 32 ............................. TATTTGATCGACGTGGATTCTGTTGACGGGTA 113001 29 100.0 32 ............................. CCGGGCAGCGGTTCATGTCAACGGTCCACATG 112940 29 100.0 32 ............................. CGCTTGCCCTTCACTACCTTGTAATACGGCTC 112879 29 100.0 32 ............................. AACTTGCCCGGCTGCTGACACTTGGCGGCATT 112818 29 100.0 31 ............................. GGCACTTGATTCTTAACGAGTCATCCCAGAC 112758 29 100.0 32 ............................. TGAGCGTCATGGCGCGGGAGTTCGGCGAATTG 112697 29 100.0 32 ............................. CACCATGTCCCGCTTCTTCTTGATCTGCTCCA 112636 29 100.0 33 ............................. TTCCGCTCCGAGCTGGCCCGTGCCGCAGTGTGG 112574 29 100.0 32 ............................. TGCTCTCCGGGCTCTCCGGTCTGGTGAATTTC 112513 29 100.0 32 ............................. CACCACCGGAGCCCCAGGAGGGGCCAGAGTCG 112452 29 100.0 32 ............................. CAGTAACCGCAGCCCTGAATGTGATCGACGCA 112391 29 100.0 32 ............................. GGTGACACCGGTGGCAGGGGTCTGCCCGCCGG 112330 29 100.0 32 ............................. GTCCGATCGCAGGCGCGGCAGTAGGTGCGCTC 112269 29 100.0 32 ............................. GTTTGCCATAACTACACCTCCTCGGCCTTTTC 112208 29 100.0 32 ............................. AAGGTAAGAACGGTCAGCCCGATGTGCTGCGG 112147 29 100.0 32 ............................. CTCACTCAATGACCTGGTACTGCCCGGTATAT 112086 29 100.0 32 ............................. TCGTCATATAACTTCGACTTGGCGATTTTCCA 112025 29 100.0 32 ............................. GCCATGCAGTCGCAGGAAATCAAGGCGATAGT 111964 29 100.0 31 ............................. TACAGGATGTGACCATGCTCGGATGGCTTGC 111904 29 100.0 32 ............................. ATTTTTTCGACAGGCGACAGGCCCTTTTTAAT 111843 29 100.0 32 ............................. GATAACGCTTGAGCGTCAGCGGCTTGACCGCT 111782 29 100.0 32 ............................. CATCTTTTTGAATTAGGGACCGATAAGGGGAG 111721 29 100.0 32 ............................. CAGGGAGGAGAATACTTTTACCCGGCGGTGAA 111660 29 100.0 32 ............................. GCAATATAAAATCCCCCGGACAAACCGGACAC 111599 29 100.0 32 ............................. AGGCATCAGGTTCCACGACTTACAGCGCCTCG 111538 29 100.0 32 ............................. CTCGGATGCAGAACTTTAAGGAAGTGGTGGGA 111477 29 100.0 32 ............................. GCCATAGCGCAACAGAACATTACCATTGCCAC 111416 29 100.0 32 ............................. TTCTCCTCCACGGCATCCATCATGATGCCGGA 111355 29 100.0 32 ............................. GCCCGATCAATCAGAGGGTCAAAGAGATCGTC 111294 29 100.0 32 ............................. GACGAGATCGCGCTCCTGAAGGTGCTTGCGGA 111233 29 100.0 32 ............................. AACTGGCATGAAAGAAGGGAAGGGCATGACCA 111172 29 100.0 32 ............................. GGCATGGAATGCCCCCAAGAGAACCATTTCAA 111111 29 100.0 32 ............................. CTCTACGACGATATCAACGGCGGGAAGCTCCA 111050 29 100.0 32 ............................. ACCAAAATCAGGAGCATCGACGATGCGCAATA 110989 29 100.0 32 ............................. GCGAGGCACCCAGTCCGGGAGGACAAACCCAC 110928 29 100.0 32 ............................. GTTCCAAAATCCCTTCCGCCGTTACTTGACAA 110867 29 100.0 32 ............................. GCAGTTATACCCGTATGGGTCCGCCTTTGCCC 110806 29 100.0 32 ............................. GTACGGCAGAGGTTGACTGTTACTGCATCAAG 110745 29 100.0 32 ............................. GCGTTTTGACCAACACTGACGGGTTATACATC 110684 29 100.0 32 ............................. GAGATGCTCGGTCAGGAGGTAGCGGCCCCGTC 110623 29 100.0 32 ............................. CGCCCTGAGATCGGTTTGGACGATTACCGTCT 110562 29 100.0 32 ............................. GGGGCTCGTTCTCCATGATCTGAGCCAGGCGA 110501 29 100.0 32 ............................. GGGATGAACGCTGAGCTCCGGGAGCAGAACCG 110440 29 100.0 32 ............................. AACGGGTTTGATTTTGAGACAGACTTCTAGGC 110379 29 100.0 32 ............................. GCCATCCAGGGTGCCCCCATCATTAAACTCAA 110318 29 100.0 32 ............................. ACCAAAATCAGGAGCATCGACGATGCGCAATA 110257 29 100.0 32 ............................. CGGTGGGGGTTGCCAGGGATGTATGGGATTAT 110196 29 100.0 32 ............................. GTGCGGTGCGGGAACTGCCGATTGCTGACGGG 110135 29 100.0 32 ............................. CCGCCCAGATCGGCCAGGCCGAAGAGGCCGTC 110074 29 100.0 32 ............................. GCGATGGGCATTACCTGGATGACGCGGAAGGA 110013 29 100.0 32 ............................. CGACGCTGCCGAGGTTCAGGCTATCCACATTC 109952 29 100.0 32 ............................. AAGTTGCAGTGGCCGTAGTGGAGGGAAACCGG 109891 29 100.0 32 ............................. TCGGGTAGTAGGTCGGCTATCCGGTTTTTGCT 109830 29 100.0 32 ............................. TCGAACGGCGTCTGATTCTTGAAGCTCGCCGC 109769 29 100.0 32 ............................. GTGATTTCCTGGTACGACCACAAGTGCAAGGC 109708 29 100.0 32 ............................. TCGTCACCCGAGGAGAGTCCTCGCGTGCCGAG 109647 29 100.0 32 ............................. GGTGGTACCTGCCGTGGCGATAGGCGCCCGCA 109586 29 100.0 34 ............................. CCGTCGTACCGCAGGTATGCCGGGAGATCGCCGT 109523 29 100.0 34 ............................. AAAATTGTTCTGCTCACCCAAGGCGGGCGGCAGT 109460 29 100.0 32 ............................. TTCCGCTCCGAGCTGGCCCGTGCCGCAGTGTG 109399 29 100.0 32 ............................. GGAGTAGTCACTTCTGGTCTGGCTGCTGGCCT 109338 29 100.0 32 ............................. TTTGGTTGTGCACTAGAAAACGCGCGTGCGTA 109277 29 100.0 32 ............................. TTGGAAGAAGCGATCAACGGCTTGAACACAGC 109216 29 100.0 32 ............................. ATAGGACTGTGGCCAATGAACTTGCGCAGTGC 109155 29 100.0 32 ............................. GTCTACAACCTCGCCACCTACGCCATCCTCAA 109094 29 100.0 32 ............................. CCGGGCGACGACATCACCCTGGCCCTGGAAGG 109033 29 100.0 32 ............................. GCGGCGTCGGCATAGGCGTAAGGGCTGGCGGC 108972 29 100.0 32 ............................. CATCAGGTCCCTCACCTCTGCCAAATCAGGCG 108911 29 100.0 32 ............................. GAATTCGGGGACTTGCTGACTGAGATCGGTCT 108850 29 100.0 32 ............................. AATGTTGCATTTGTCGGCTACGGCCTGGACGA 108789 29 100.0 32 ............................. GCAATTGGCTATTATTGCGGACGGAATCGCTA 108728 29 100.0 32 ............................. CGGCTGGTATTGACGCAGGGCGGGGTAACGTT 108667 29 100.0 32 ............................. GAACAGGAGGCATTCCGCACTGCTGTCTACCG 108606 29 100.0 32 ............................. CCGCTCGGGGATAACGTCCCCGTGCGGTTGCC 108545 29 100.0 32 ............................. CTGGCGGTTGTGGTAGCGCGATCATGGACGGA 108484 29 100.0 32 ............................. CTCGCCCCGCACGATAAGCCGTTTTATGCGAC 108423 29 100.0 32 ............................. GAGTGGCTAAAGGGTGACACAAAAAAACCGTT 108362 29 100.0 32 ............................. TTTGCCAGCCACTTATAGTCGTTGGTCTTGGT 108301 29 75.9 0 ............CAT.........CGGA. | ========== ====== ====== ====== ============================= ================================== ================== 81 29 99.7 32 GTGTTCCCCGCATGCGCGGGGATGAACCG # Left flank : AAATTCTGCACCGGATTATTCCCACTATCGAACAGGTACTTGCGGCCGGTGGCATGGCGGTGCCCACGCCGCCGCCCGAATCGGTCGAAGCCGCAATTCCGAACAAGGAGGGGATCGGCGATGCTGGTCATCGTGGTTGAGAATGCGCCGCCGAGGCTGCGCGGCCGGCTGGCTCTCTGGCTGCTTGAAGTGCGGGCCGGAGTCTACGTGGGCAAAGTCTCGCGTCGGGTGCGGGAGATGATCTGGAATACCATCGTGCAGGGGATTGACGACGGTAACGCCGTCATGGCTTGGAGTACCAACACAGAGTCGGGTTTCGACTTCCTAACCCTCGGCGCCAATCGGCGAATTCCTGTGGAGATGGATGGAATCAAGCTGGTGTCATTCCTGCCGGAGAATGGAGCGCAGCAGGCTGCAGAACCATGACGAATCCGGTGAGAAAAGTTGGTAGGTTTGAGCTGTTTGGAAATCGCATGTGAATTCAATGAAGTAGAGGAAGT # Right flank : TTCTAGGGCTTGTGTCCACAGGTCGGAGGGATGGCTTGGAGCCTGACGATGCATGTCTGCTTCTGGTGGCTCCATTCATTTCTGCAACGTGTAGTTACGGTGGCGCTCTTTGGAAACAAGAAGACGGCCCCCAGCATCGGGAGCCGTCTTCTTGTTGTTCAAGTCCGCGCGTCTACGGACGAGTTGTCGCTTCCTACCTGATCGTCAGGTTGTTGACGACGAGCGCGCCGTTGGTGATGGTGAGGACCCCTTGCAGGGTCGTCATGCCGGTGCTGGTGCCGAAGAGCGCATCGTACCCGCCGCGGAACGTTATGGTGCCGGTCTTGTTGAGGTTGACTGCAGGTTCGGTGAACAGGATCCCGAAGGCCTGGATGGTGTTGCCCGATGCTGCTGCAGTGAAGGCAGCCGCCAGGGTCGGATAGTAGATGGTGTTGATCCGGACCGGGTTGGTGGCTGCCGCGACGCCGGTGCCGCTCAGGTTGATGTTCGGCACGGGGGAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCATGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //