Array 1 876-48 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTZA01000041.1 Enterococcus faecalis strain CVM N53761 N53761_S23_L001_R1_001_contig_41, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 875 36 100.0 30 .................................... CATGATGCCGATGCGCTTGCCTTCCGAATA 809 36 100.0 30 .................................... CAGCCAGTCGGAAAAACAAGGGTATATAAA 743 36 100.0 30 .................................... TAGAAGTGCCTAGGAAAAACAGACACATGA 677 36 100.0 30 .................................... TCTACTGCAGTTCCAATCACTGCTTTTGCA 611 36 100.0 30 .................................... CGGATCGCAAGACGGATCTTACTTTATCAA 545 36 100.0 30 .................................... ATTTAGCTGTAATAATTGAAAGCATCCATT 479 36 100.0 30 .................................... AAGCGGTCATTTTAGATAAACGTGCGCTTG 413 36 100.0 30 .................................... AGTGTTGACGAAATCAGCAAAGAAACGGAT 347 36 100.0 30 .................................... TGCATGACGATCCATTTGTAAATGGTCACA 281 36 100.0 30 .................................... GTATTGTTCATAAATACCGCTAGTATTGTA 215 36 100.0 30 .................................... GTCCACGAACTAGGAATTTCAATTTCGTCA 149 36 100.0 30 .................................... CCGTAGCGTCAAAAGAAAGTGAGGTTATTA 83 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 13 36 100.0 30 GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC # Left flank : GCGCCAGATTGGACTTGACTCAAACCTGTTCCGCTTCCGCCACCTTGGACATTAATAAATCTTCCCGGATTTTGGCTTTGATATTCCTCACTCGCTGTCTCTACTAATGGTTGTAAAGCTGATGAGCCTACCGCTGTGATGGATTCACCACGATCAATCCATTTTGCACATCCTGTTAAAGTAAGTATACTTGCCAAACCAATAAATAATAGCAATCTTTTTTTCATCGATTCATTATTCCTCCAATTAATTTCAATCTATTCTATTTTACCATTATATGTAGGACTTGAAAATTATAAGTTATCAATTTGTTGGTACAACTGAGAAAACTCTTAAATTAAATAACAAAAAGTATCTGAAAAAGCCAATTTGGCTGTTGCTTCAGATACAAATAATTATGCTAGAAAGATGACTATATTTAAACATTTAGTGGGGATGGCTTTTTTGAAAATTATTTGGGGTATAAAAGCGAGTTCGTACATCCAACCTACTTCCTTATT # Right flank : CAAATCACTATCTAATACTTTTGCACCCAAAGTTTTACTGATAAGAAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 144360-145117 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTZA01000005.1 Enterococcus faecalis strain CVM N53761 N53761_S23_L001_R1_001_contig_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 144360 36 100.0 30 .................................... ATCAGCAACGCTTTTCCATTCATCAGATTT 144426 36 100.0 30 .................................... CATTAAACAATACATCAATGGCATATGACA 144492 36 100.0 29 .................................... TTCGTGGATCGGTGAATACCCTTGATCAG 144557 36 100.0 30 .................................... TGTTTTAGCTAATTCCTCTGCGCGCCATTC 144623 36 100.0 29 .................................... AATTTTCTTTAATAACCGCATACGCTGAA 144688 36 100.0 30 .................................... CTTTTGCAGCAAGATTCGCTAATTCATCGT 144754 36 100.0 30 .................................... TTCTTGAATTCTTGGTATTTCAGTGCACCT 144820 36 100.0 30 .................................... TTGATCATCAATCTAGCGTTACTAACTACT 144886 36 100.0 30 .................................... ACAGGATTAGGAATAGAAATTTTCGTTAAA 144952 36 100.0 29 .................................... TAGGTCATTGCCAAAATATCCGCTTCATT 145017 36 100.0 30 .................................... ACGCTATTATGCTATTCTGCGTGGTTGCAT 145083 35 97.2 0 ...................................- | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 99.8 30 GTTTTTGTACTCTCAATAATTTCTTATCAGTAAAAC # Left flank : ATTCATTATATCTTTCAGCAGTTAAAGAAATTGGCTCAAGAAACAAAGCAGTTGAAGTTTTTTATTTTTAGTAATAGAAGCTTACCTTTACCGTATACGGAGGAAGATGTTGAGAAAACGATTTTGTTATATGATAAGTATCAGCAGTTGCCAGTTTTTGATGTTTTTCGTCAAAGTATCGAGCGACATTATCCAGATCAACTCTCTTGGACAAATCAACAACTAATTGATGCTTTTTATCGAGTCTGTCATTTTGTTGGTGATCAGTATACAAAAAATTATCTTTTACCTAAAGATATGATATTATTAAAATTGTTGAAGGAATTGTTAGATGACAATAGTGAGTGTGTCGAGACGTCAATGGAAAAGCTCACTGTATTGGAAGAACAATATTTTCGCGAACGATTATTGCGGAAAGAGTGAGTTTGGAATTTTAACCGTGTAAAGTTATATTTTTTATCAAAAGGATTATTAATGAGATTTCAAATTTTAAATTTGAG # Right flank : | # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAATAATTTCTTATCAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //