Array 1 11933-10131 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHOET010000005.1 Holdemanella biformis strain MSK.21.54 NODE_5_length_50636_cov_297.062, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 11932 36 100.0 29 .................................... ATTTATCACCATTCGTGATAAACAAGAAT 11867 36 100.0 30 .................................... CGTTTATGCGGAACGTTCAAGCAGAATGAA 11801 36 100.0 30 .................................... TTTTAGAAACGTTTAAAGGAACTAGTAATC 11735 36 100.0 29 .................................... AGAATTCGAAAAAGAGTTAAATGCATTTA 11670 36 100.0 29 .................................... ATCGGTAATAAAGACAAGCAACTCCCTCG 11605 36 100.0 29 .................................... GAAATCAGACATGTATGTTAGGTTTACTC 11540 36 100.0 29 .................................... AAGTTTTGTGGGAGAAGTTATCCAGGCAC 11475 36 100.0 29 .................................... AGCGGTATCCAGTGACAGCTTTTGAAACT 11410 36 100.0 30 .................................... ATCTCAAGTGCTGCACCAGAAGCAGATAGA 11344 36 100.0 29 .................................... CGAATGAACATTACAGTTATAAAGGACAC 11279 36 100.0 29 .................................... TGTTGTACCACGTTCTCACCTCCTTCGCG 11214 36 100.0 29 .................................... GTTTGACTCACTTAAACCAGGAGGATACA 11149 36 100.0 30 .................................... CCAATCGGTTGGGATGGTATAAGAAAAGCT 11083 36 100.0 29 .................................... GAAAATGTACAACGTTATGTTGTCGGCAG 11018 36 100.0 30 .................................... GTGATTCCATCATTAATATCACTTGCTACT 10952 36 100.0 30 .................................... CCGTATTTACGGGCCGTGCTTATGTTAGTA 10886 36 100.0 29 .................................... TACAAACCCTCAAGTCGTGGAAGTTCGTA 10821 36 100.0 30 .................................... AAGCATTCAAACAAGCGCTAAGCGATGTCG 10755 36 100.0 30 .................................... AATCACCAATAGATAACGGTATATCATATT 10689 36 100.0 29 .................................... AAACAGTAAAGGTATTAACACTGTCCCTT 10624 36 100.0 30 .................................... GTGATATTGCCGTGTGGGGTTCAAACATGG 10558 36 100.0 30 .................................... AGGAAATGGAAAGAATTAGAAGGGAAATAT 10492 36 100.0 29 .................................... TCGTTATCCTTCGTGGTTTCTGCAACACG 10427 36 100.0 29 .................................... AGAAATTGACGCAATGAATAACACTTTTT 10362 36 100.0 29 .................................... TCGTTATCCTTCGTGGTTTCTGCAACACG 10297 36 100.0 30 .................................... CATATATTCCACCATCATATGATGAATACA 10231 36 100.0 29 .................................... CTTTGCTTTCCTGAAGTACATATTGAGAC 10166 36 97.2 0 ...............T.................... | ========== ====== ====== ====== ==================================== ============================== ================== 28 36 99.9 29 GTTCTTGAGGATTGAATTTATTTGTATTATTTGAAC # Left flank : CTGATTTTAATATTTCTAAGTTTATATCAATGCTAGATATAAATGTAGATGATATTTCAGCAGATAAACAATACATTATGGTTTACAATTTGTTATTGTTTGTGAGTAGAAATCAATATAATGTTGTATATATTGATTTTCCAATTACACAAACCGTATTAAAATGGATGAAATCGTTTGATCAAGATAATATGATGTTTCTCTTGAATAATGATTATATGGTATGTGATTCTTATCAAGAATTAGAAAAATTTGCCATGTTGATTGTTTCTAATAAAGATTACATTGAAAAATATGAATATGATTTAAACCAATTTAATAACATTTCCTATATACAAAATCCTTATACTATGCTTCATAAGCAACAACAAACAGAAAAAAATATTCGATTAATGGAACAATTTGAAGATAAAAATACAACTTTTTATCTAACTTTTAATGATACATATACTCAAGATATACTGTAAATAAAGCACAATTATGCTATAATAAGGCCGACA # Right flank : TTCCTTTTGAATTAACTGGATACTTAGTGCGTTTTTGAGGATTAGACAATAAAAAGAAATATTGCTACTTCTTAGGTGTTACATTAACTACCACATACTCACATATACCCTCTGTTCTTATTGGAAAACCCCAGCCAACAAGGCCTGAACTTATGATTTTTTTAGTGCTTGAATGTTTCTTTGCCGTAATTACCCGCAAAATCGGGCTGTAAATGGTAAGAATAAGAGAGTGGAAACATTTGTCCGTTATGGGTATGTCCACTGAGTTGAAGGTCAACGTTGTTTTTAATGTTTTCTTTTGTTCCTTGTGGTTGATGGTCTAGGACGATGTTGTAGGTTTTGTTTGTAAGGTTGTAGTCCTTTGTTTTCTTTCGGTTTTTGTTTGTGTAGTCTTTTCTTTCAATAAGGATAATGTTATTTAAATGTACTTCTTGATCATTTAGAATGGTAATGTTGTTTTTTATGATTTCTTGATTAAGTTTATTTCTTGTGAATTTTGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTGAGGATTGAATTTATTTGTATTATTTGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //