Array 1 3077987-3073963 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011307.1 Intestinimonas butyriciproducens strain AF211 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================= ================== 3077986 33 100.0 36 ................................. CCACATGGGGCAGTGGTGGGCACGAGTCCATCGTGG 3077917 33 100.0 34 ................................. CAACAATGCCTGCTACAAGTACGACACTAATCGT 3077850 33 100.0 36 ................................. CGGTTTGCGATGCCTTTTGCATAGAACACCAAAATG 3077781 33 100.0 34 ................................. AAACAGTTCCTGGTTGATACGTTGGCTCTGGCTT 3077714 33 100.0 36 ................................. GTCAAACCTGGAGCTAGTCACTCCATCAGAAAGCGG 3077645 33 100.0 35 ................................. TCCGGATACCGTCCAGCACGTCATTGTCCGCCTTA 3077577 33 100.0 34 ................................. TACGAACGGGCTGTAATGATGCCTACAGTTCCAT 3077510 33 100.0 34 ................................. ATGAGCAGATTTGCCCAGTCCTCCGGGATCTTCT 3077443 33 100.0 33 ................................. ATCAAGCAGCACGCCCGCCAGCGTCCGGCCCTG 3077377 33 100.0 36 ................................. ATAAACAGCTTACCGGAGGTAAGGAGGGCTAAGCGA 3077308 33 100.0 35 ................................. TCCTGGAGAAGCAGATCAAAGCGATGAGCGTCACC 3077240 33 100.0 35 ................................. ATTCTTGACATTCCCCGTAATTGGTGGTAGTATTT 3077172 33 100.0 34 ................................. CCAAACTAATATGTGCTCCATTACGTAACCGGAT 3077105 33 100.0 35 ................................. CAGAGCATTGTCGATTGGTTGGCAGGCATTCCGGG 3077037 33 100.0 33 ................................. CCGATGGTCCACCCGAGTATGCTCCGCCGAATG 3076971 33 100.0 36 ................................. AAGCTAAATGCGGAAGATTACGAGTACCTGTATCGG 3076902 33 100.0 34 ................................. TGTGGTGCCTATGGACAAGGTCAAGTTCCGCAAC 3076835 33 100.0 34 ................................. GTGTACCTCTTCCGTGCCCCGCTTGGTGCTAGAC 3076768 33 100.0 35 ................................. GTCGATCTCGGTGGCGTAGTAACGGCTGACCTCCA 3076700 33 100.0 34 ................................. CCAAAAAAGTATAAGGCGGCGCTACCGGCAGACG 3076633 33 100.0 33 ................................. CACCCGAGAAGTGGCTTACCGTCAGATGGGTCA 3076567 33 100.0 34 ................................. CAGAAACACAATTTGGAGCCGAAGGTCACAGTGG 3076500 33 100.0 35 ................................. GTTCACCAGTTGCTCCCATGCAGCCTGAGGATACA 3076432 33 100.0 35 ................................. CCGGAACGGCCGGGAGGAACTTCGGTACATCGAGG 3076364 33 100.0 33 ................................. ACAACAAGTACGTCATGGTTGAGAAGCTGGCTG 3076298 33 100.0 33 ................................. CAGAAAGAGCAATGCGACACTAATGCTTGGTTG 3076232 33 100.0 38 ................................. CAATACTTGCACATCTTGTTGCGACTCTTTGCCAGTTC 3076161 33 100.0 39 ................................. CTTGCCAGAATTGCGGTTCAGTTCCTCTCTGGTGAACAC 3076089 33 100.0 33 ................................. CCGCGCTGAGCGCAACTGCGCCGGCACACAGAG 3076023 33 100.0 35 ................................. CAAGCGGGACAAGGCCGCACCGATGGCACGCCATG 3075955 33 100.0 34 ................................. TCGGAAATTATTCCGATGGTTGAATCCGCTTACG 3075888 33 100.0 34 ................................. TGGAAATTGGTAGCAGGCTGAACGAGGCAAAGGG 3075821 33 100.0 34 ................................. CAGAATCGGAGAGTCCGAAAAACGAATGGCAGAA 3075754 33 100.0 36 ................................. CACAGGGACAGGCTTGCCCGTGACTGCTCTTCCAGG 3075685 33 100.0 35 ................................. TGTCATTCAGGGGGAGGGTGATTACCGGCGTGGAG 3075617 33 100.0 33 ................................. AGAAAGGATTGATTTTATGGCTGAGTATACGAA 3075551 33 100.0 34 ................................. CACTTGTTACGCCCAGAAAACTCCATCCCGCATC 3075484 33 100.0 35 ................................. TGTCATTCAGGGGGAGGGTGATTACCGGCGTGGAG 3075416 33 100.0 33 ................................. AGAAAGGATTGATTTTATGGCTGAGTATACGAA 3075350 33 100.0 36 ................................. ATAATAATTTTCCTTTCCGGCCTTTCGGCCTGTCAC 3075281 33 100.0 34 ................................. GACTGCTACCGTCACACAGCAGCCACGCGGCACC 3075214 33 100.0 34 ................................. CTCAGATAGCTCTCCGTTACGCAGAGTATAATAT 3075147 33 100.0 35 ................................. GGGAATGGAGACTATGAATCTCTTTTTGATGAGGT 3075079 33 100.0 35 ................................. GGGTAGAGCTTCAGCTTCGGGATAGTCGAGCCCTA 3075011 33 100.0 34 ................................. TCTGTCCGGTTGTCTCCGAGTGATGAGGTGATGC 3074944 33 100.0 35 ................................. CTTTTTCCCAGTTAGCGACAGATTCTTTAGAAACG 3074876 33 100.0 35 ................................. AGATACCGGGACGTGGTCACGATCCCGTTAACCAC 3074808 33 100.0 35 ................................. ATTCCACATCGTTCCAGAGCGCGCAGACAAGCCTC 3074740 33 100.0 34 ................................. CACCGTCAGCTCCGTGTATTTTGGAGCGAGCTAA 3074673 33 100.0 35 ................................. ACCCAGTGGCCCAGGCCACGAGCCGTTCTGGCACG 3074605 33 100.0 33 ................................. CTTCACGTTGCCACCTGGGAAAAGTATCAGCGC 3074539 33 100.0 35 ................................. TTGCTGGCGGTGGCATCAAGGCTAGCTGTAGCATC 3074471 33 100.0 35 ................................. CTATACTGACTATCCCCCAAAGTTTGGGCGAAAAA 3074403 33 100.0 36 ................................. GACGTGTGGGTGGAATACACGGCCCCCAACGGGAAG 3074334 33 100.0 35 ................................. AGCGGCCGCCGGAGTCTGGCCGCCCGGGGTGTGGT 3074266 33 100.0 34 ................................. AACGAGGATGGAGAGTTGGAGGACAGGCGGCTCC 3074199 33 100.0 35 ................................. TGCGGGAGGGCGGAGACCCCAGAGAGGTCCTCTCC 3074131 33 100.0 35 ................................. AGGAGATTGGAGAAATCCTGCGGCTGGCCGGACTG 3074063 33 100.0 36 ................................. GTGAAGCGGATGACAGGCATCGACCGCCTCGAATGG 3073994 32 78.8 0 ...................-....A..CTCC.C | ========== ====== ====== ====== ================================= ======================================= ================== 60 33 99.6 35 GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT # Left flank : ACTTGGACGCTTACCCACCTTTTTTGTGGAAGTGATAGTATGCTGGTTTTAATCACCTATGATGTGAACACCGAGGACGCCGCTGGCCGCAAACGTCTGCGGCAAATCGCGAAGCAGTGCGTCAACTACGGACAGCGGGTGCAGAACTCTGTCTTTGAATGTCTGCTGGATGCGGCCCAGTGCCGCATGTTACAGGCAAAGCTGTGTAAGATCATGGACCCGGAAAAGGACAGTCTTCGTTTTTATTACTTGGGAAACCGCTATGAAAACAAGATCGAGCATTTTGGAGTAAAGGCATCCTACAACCCAGAAGATGTATTGATGCTTTAGGTGCGAAACGTAAGCGCGCAGAAAATCGCCGAGGTCTCGCACCAGATTTTGCAGTATTATCTGTAAGGAGGCAACCTTATTTTTCAAAATCGGATAAGAGTTAGAAGAGGATATTTGTAAGAATTGTCTATTTTTCACGAGAACAGATTGAATTTTTAGCTGTTTTTGCT # Right flank : TTTATACGGTCGCTCACATATGGATAAGACCGCTAAAAAATCCAATGAATCTTTCGTAACAGCATCCTATCCTACTTCTAACAAATTTCTAACAGAACGATAAAAATGAATATCCAACAGGCCCAATGGTTTCTGAGATTTTATTCCGCATGAAACCCGGAACTCCTTGTGCCACAGCGGTTTTATGGGGTATTACCAGAGACAGCCAAACACCCGTAGGAACATACCATGCCCCCTTCGAGTTCTGCTGTCTCCACCAGAAAAATCCATGGAGCCGCAAGGCTTTGGGGATTTTTCGTTTTTGGTTAATTTTTAAATGTGACATTTCTTTGTATCAAATGTGTTTCTTTTATGAATTTTAGCACTCCTATATTGACAGTGCTAAAACAGAGGACTATAGTAGAGCCGTACCAAGGGAAGGGGACCAGAAAAGGTCTTCTCTGCAGGGCAAAAAGGTAAGACAACGAATGGAGGAATGACTTGTGTTGCCCAGCATTTTC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCTCCACACGGAGGGCGTGGATAGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.80,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.42 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //