Array 1 136660-138702 **** Predicted by CRISPRDetect 2.4 ***
>NZ_SWCM01000008.1 Desulfopila sp. IMCC35006 NODE_8_length_262111_cov_106.739992, whole genome shotgun sequence Array_Orientation: Forward
Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion
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136660 29 100.0 32 ............................. GACGGTAATTTCCAGTGCTAGAATTAACACCC
136721 29 100.0 32 ............................. TGTATCCGGTAGATCCTAATTGCACGACGACC
136782 29 100.0 32 ............................. AGAGTGGTCAGGAACCTGCTGCGGTGAGTGGC
136843 29 100.0 32 ............................. AAGAACGGATCAGCAGGAGTGAATAGAAACCC
136904 29 100.0 32 ............................. GCCACCAACGCAATGGATCTCATTAAGAAGAA
136965 29 100.0 32 ............................. AGCAGGATATCCAGATTGGATTCTGTTTAAAC
137026 29 100.0 32 ............................. TCAATCCTTCAGCGCGTCCTTCATCCGCTCCC
137087 29 100.0 32 ............................. GCCATCTGCCAGAAGCCGAACCCGACATTGCA
137148 29 100.0 32 ............................. TCAGGGATAACCGAAGTAACAGCGCCTGACGG
137209 29 100.0 32 ............................. ATAATGGGAAGGGCTGATGTTGATAAAGATTG
137270 29 100.0 32 ............................. GAAACTCAAGCTGCCACATCCCAAATGACACA
137331 29 100.0 33 ............................. TTCAGCGGTTATTACGTGCCGACCACGCTTACC
137393 29 100.0 32 ............................. GCACCTGATGATAGAACTTTACAAATTGAGAA
137454 29 100.0 32 ............................. CCAGTTAAATAAAGAGCAGGGGGCAATCTTGA
137515 29 100.0 32 ............................. AAAAGCCTCTTTTCCTATAGTGTCCATCTTCT
137576 29 100.0 32 ............................. GCCGCGCTCAAGAAAACAGGGTTTACGGTGCA
137637 29 100.0 32 ............................. TGCCACAAACTAGACCCGACGCAGGATCTTTG
137698 29 100.0 32 ............................. CTCAGACAATAGTTTTCGGTATTTTATAAACC
137759 29 100.0 32 ............................. GCGGCTCGATTAGCCCTGGCTCTTGGTCAGCG
137820 29 100.0 32 ............................. TAGTACCAGGCAACGGTACTACATAAAATGGA
137881 29 100.0 32 ............................. ATCACACCAGGCCGTAAGGGCTGCATTGTCGG
137942 29 100.0 32 ............................. TGAAGTTGGGCAGACTTCACCTTTAATCCACT
138003 29 100.0 32 ............................. GAAACTTGACGCGGATATCTCCACCTGGCCGG
138064 29 100.0 32 ............................. AGCAGGTATTGCAGACTATAATGATGCTCAGA
138125 29 96.6 32 ............................T GCCGCGAGTATCCACGACCGCTTGATAATTAC
138186 29 100.0 32 ............................. AATGATCAACACAGCAAAAATTGATTGCTTCT
138247 29 100.0 32 ............................. CCTTGATTGCCAAAACGTGGCCCGGCTTTGTA
138308 29 100.0 32 ............................. ATCGCCTACTTCCAGTTCACCAAGACCATTGT
138369 29 100.0 32 ............................. ATCCCTCCAGGAACTCCCATGAACGGCGATGT
138430 29 100.0 32 ............................. TATCAATCTGTTTCTTCCGTGCGCCCGATAAA
138491 29 100.0 32 ............................. CAACCGCCAGACCCGGTGATGGTCGTACTTGC
138552 29 100.0 32 ............................. ATCGCATTGATATGTGGTCCGTCCGGAGTCAT
138613 29 96.6 32 ..............T.............. ACTATTTTATCATTTCCTTCCTGCTGTTTCAT
138674 29 93.1 0 ..........G........A......... |
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34 29 99.6 32 CTGTTCCCCGCACCCGCGGGGATGAACCG
# Left flank : GACAAGCCAAATTGCTCAAAAGAATTATACCAACTATTGAACAGATATTGGCTGCTGGGGAAGTTGCTCCCCCAGATAAACCAATAGAATCTGTTGAAATGGCTATTCCTAACAAGGAGGGTATCGGTGATGCTGGTCATCGTAATTGAAAATGCGCCACCTCGTCTTCGCGGGAGGCTTGCGGTGTGGTTACTGGAGATTCGAGCCGGAATTTATGTCGGTAAAGTGTCGCGACGTATACAAGAAATGATCTGGAGCCAAGTCGAGCATGGAATAGAAGAAGGCAATGCCGTGATTGCCTGGTCGACCAACAGCGAAAGAGGATTCGATTTCAATACAATTGGTGAAAACAGGCGAATCCCACTTGAGATTGATGGGATAAAACTGGTATCCTTCCTGCCTATACAAGAACCCTCTGAAAACTAAAACAGTACCGTATATTTTACGGTAACCTTGACTGATCTTTGAAAATCTAATAGTTTCAATTGGTTTCAATTAGT
# Right flank : GCCGGACTTAGTGGATCGGCGAAAAGGGGATTCCCGAAATCTGAAATAGCTTGCATGTCCAAGGAGGTATTGAGGGAGATGATTATTTTTGGGGTGAAGGGTGAAGAAACAAAGTTCAATTCCCACATGGTTTCAGAAGATAATCAAGACGGTGAATGCCTTGTACTAGATCCCAAGATGGTATTTAAAGTAATACCAGTGCAATATAGTGATCCACCTCGCACAGATATTGCGATACTGGAAGTTGTTGGGGAAAAGATCAAGGCAGCTTCTGACGGGGCGTTTGTTTTTGCGACCGATGATCTTGTTGAACTGGTCAAAAAACCTGTAAGAAATTCGAATAAAGCTAAATGAGTACTTGGTACCACGAAACGACTTGCCGATGCGAGAGGAGGTTCCCTTGCTGGTGCTGTTGGGCGTTTGGCCATGAATGTCGATGGCACCAAAAAGATATTTTGTTTCTGGAAACAGAATAGGTGGGCTGAAAATTTTAGGTGTAT
# Questionable array : NO Score: 6.24
# Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat : CTGTTCCCCGCACCCGCGGGGATGAACCG
# Alternate repeat : NA
# Directional analysis summary from each method:
# Motif ATTGAAA(N) match prediction: NA Score: 0/4.5
# A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37
# Reference repeat match prediction: F [matched CTGTTCCCCGCACCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5
# Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37
# Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41
# AT richness analysis in flanks prediction: F [71.7-50.0]%AT Score: 0.27/0.27
# Longer leader analysis prediction: NA
# ----------------------------------------------------------------------------
# Final direction: F [5.55,0 Confidence: HIGH]
# Array family : I-E [Matched known repeat from this family],
//