Array 1 1842576-1844331 **** Predicted by CRISPRDetect 2.4 *** >NZ_PEIJ01000001.1 Fusobacterium nucleatum subsp. vincentii strain KCOM 2880 contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1842576 36 100.0 30 .................................... AAATTTGAACCTGATGGAAGTAATGTAAGA 1842642 36 100.0 30 .................................... TAAAACGACATCAGTTAGTAGCTTTTATTT 1842708 36 100.0 30 .................................... CTGATTCAAGAGAATTTAAACTTGTATGTA 1842774 36 100.0 30 .................................... AAAAAAATGGTAAATATTGATGTGATTCCT 1842840 36 100.0 31 .................................... CAAAGGTTTATCCTTAGCCATAAGGATAGGG 1842907 36 100.0 30 .................................... TAAAAGATATTCTATTACAGATGGCTTTTC 1842973 36 100.0 30 .................................... TTTCTTGAACATCTACACCATATAATATAG 1843039 36 100.0 30 .................................... GTTGTGATACACACACTGTATTAAATAGTA 1843105 36 100.0 30 .................................... TATACACATTCCATATATAAAGAAATTAAC 1843171 36 100.0 30 .................................... TTCTGAGAAGACATTTGAAAGAGAAATTTT 1843237 36 100.0 30 .................................... AAGCAAGATTTTCTATACTTATAAACTTAA 1843303 36 100.0 30 .................................... GGGGAGGTGTACACAATTTGATAACAGATA 1843369 36 100.0 30 .................................... TCAAGCCTATCAATATAAGTAAACACTATA 1843435 36 100.0 30 .................................... CAATTTCTAATAATTGTCCTATTTTTATAA 1843501 36 100.0 30 .................................... GAGCAGCAACTCAATCTACTGACATGAGTG 1843567 36 100.0 30 .................................... ATTATTTAGAAAAGGTAGGGGATTAATCCT 1843633 36 100.0 30 .................................... TTTTGTTATACTTTTTATTATTATCATTCA 1843699 36 100.0 30 .................................... TCCTCATTTCCTTTGACGTCTATTTTTCTA 1843765 36 100.0 30 .................................... AAAATAAATTAATAACAAGAGGTATTATGT 1843831 36 100.0 30 .................................... AACAAGGTTTTTATGCACAGTATAAAAGAA 1843897 36 100.0 30 .................................... AAATAGATTTGATGATGCTATTGGATTAGA 1843963 36 100.0 31 .................................... TAAATAATGTAGCTACTCCAAATATATTTAA 1844030 36 100.0 30 .................................... TGTTTTTTCTTTTCTCTGTGGCATTATGTT 1844096 36 100.0 30 .................................... TAGAGAAATTATGAAAATTAAAACTGCTTA 1844162 36 100.0 30 .................................... GTAAATTATCTTTTCAAATCCATTCAATTA 1844228 36 100.0 30 .................................... AATAATTCCTGTTTATTTGGTAATGTTTGT 1844294 36 83.3 0 ..................C.......T.G..T..CT | AA [1844315] ========== ====== ====== ====== ==================================== =============================== ================== 27 36 99.4 30 GTTTGAGAGTAATGTTATTTTAAATAGATTCAAAAC # Left flank : TATTATAAGGAATTAAAAAATTTAAGTGAAAATGAGTTTTTAAATGAAACTTTAGAAATTAAAGAAATTTTAAAAGATTATATTAATAAATTAATAGAAAATAATTATTCATTAAAGTTTGAAGATGATTTAGATGTTAGCCAAATTTTAAAAGCATTTAGTATAAAATTTGAAAGAAGTGAGGACTTATTATTAAATTTATTTGAATGGTTAAAAATATTAAATGAAATCTTAGGATATGAGATATTTTTCTTTATAAATATAGAAAATTTTTTATCAGAAGATGAATTACTAGAATTTTCTAAATTTATAGTGTATAATAAATATAAAGTTGTTTTTTTAGAAAATTTTTATAGAAATAAGTTATCTGATAATGATAATTTAATTGTTATAGATAATGATTTATGTGAAATTTTCTAATCTATTTAGAAGCATTGAATGATTCGTAACCATTTTGATTAATTTCAGCTTTCAGTATAGACCTAAATATATGAATTGAG # Right flank : TTTTTTCTATTTTAAAATAACAAAAAAGAGGTATTTGAAAAATAACTATTTAAAGTAGATTAAAATAATAGTAAAAGAAAAACTCACAAGCTTCTTGTTCAGTTTGAAAATAATGTTTATCTGTAAAAGCATGACTATCAGCATAACAAACTATCCAATTATTCTCTCCTTGAATCAAACACACATCATTAAAATGTAACTCTGTTGTTATATAATAAGTTTTAAAATAATATTCTTTTGGTTTTTGAGCTTCAGCTTCTAAAACTTTTAAAAGTTCAGGAACAGTTTTTATTGGAAGATATGATAATAACTTTTGTGTTCTAAGTTCATTCTTTTTTTCTGTATGTAAAGTTGCAAAATGTACCCATATTTTTAAAACAATAACAACAGGTAAAACACAACAAAAAAGAAGCATAAGTAAAATTTTAAATAATATCATATATTTTTTACTCCTTTAAAATATATTAGTAATCTTCTAAATGTTCTAATTCAAATTCAAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTAATGTTATTTTAAATAGATTCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: F [matched GTTTGAGAGTAATGTTATTTTAAATAGATTCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //