Array 1 1048536-1052463 **** Predicted by CRISPRDetect 2.4 *** >NZ_UWYQ01000001.1 Klebsiella pneumoniae isolate kpneu057, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1048536 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 1048595 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 1048656 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 1048717 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 1048778 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 1048839 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 1048900 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 1048961 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 1049022 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 1049083 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 1049144 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 1049205 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 1049266 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 1049327 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 1049388 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 1049449 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 1049510 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 1049571 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 1049632 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 1049693 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 1049754 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 1049815 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 1049876 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 1049937 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 1049998 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 1050059 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 1050120 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 1050181 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 1050242 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 1050303 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 1050364 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 1050425 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 1050486 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 1050547 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 1050608 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 1050669 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 1050730 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 1050791 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 1050852 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 1050913 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 1050974 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 1051035 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 1051096 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 1051157 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 1051218 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 1051279 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 1051340 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 1051401 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 1051462 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 1051523 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 1051584 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 1051645 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 1051706 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 1051767 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 1051828 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 1051889 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 1051950 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 1052011 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 1052072 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 1052133 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 1052194 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 1052255 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 1052316 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 1052377 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 1052435 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //