Array 1 3554117-3555584 **** Predicted by CRISPRDetect 2.4 *** >NZ_FSQX01000001.1 Halomonas meridiana strain ACAM 239, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3554117 28 100.0 32 ............................ CGAGGCGCTGGCGAATAACGTCTACGGCGGGC 3554177 28 100.0 32 ............................ TAACGGGTGCCCTGAGTGTACCAGCTACGGTT 3554237 28 100.0 32 ............................ ATCATCGCCCGCGTGTCGCTGTTTGACATAAT 3554297 28 100.0 32 ............................ ATAGCTGGCGGCGCAGAGCTGGCGTCAATTGG 3554357 28 100.0 32 ............................ TATATCGGCATGGCCTATTGCGTACTCGCTCC 3554417 28 100.0 32 ............................ TTCACCATAGTTTTCAAATAGTCCGCGCTGGG 3554477 28 100.0 32 ............................ CGATATGGTGCTCACGGTTACAGTAGCCATAG 3554537 28 100.0 32 ............................ TGCGTGTGCGCCGCCGTTGGCGAATCCGGGCA 3554597 28 100.0 32 ............................ GTTGGCATCCAAGCAGTCTTGAATGCCCTGGG 3554657 28 100.0 32 ............................ CGGCGCTGCCCCATTGCAATATGGCTGTCATA 3554717 28 100.0 32 ............................ AATCAACAACGCCGCTGCATAACCCACGCATG 3554777 28 100.0 32 ............................ ACCAAATGCGGGTCGCCACTCAATACCGTTAC 3554837 28 100.0 32 ............................ TGCGCGCCCCTAAGGTGCAGCTAGCCGGTATG 3554897 28 100.0 32 ............................ TGCCGCCCGTTTTGGTTAATGGATACGACGCG 3554957 28 100.0 32 ............................ TCGACGATGCTGCCGATCTGCTTGGCCTCGAG 3555017 28 100.0 32 ............................ CTTCTCTTCGCCGATGTCGGCGATCAGCCGGA 3555077 28 100.0 32 ............................ GGGAGGCGGTACGGCGATTAGACGCTCTACTG 3555137 28 100.0 32 ............................ ATAGCTCGTAGCGGGCATCGCTCACCACGGTA 3555197 28 100.0 32 ............................ CAATGGCTGCAGGATCGCCGCCAGCAGTGCGT 3555257 28 100.0 32 ............................ GTCCAGGTTGAAATAGACGTTGATACCTGCAG 3555317 28 100.0 32 ............................ AAAGAGCAAAAGTCGCGCTACCTCGATGCGAT 3555377 28 100.0 32 ............................ GATCCGCTGGGTAAACGCGGCCTAAAGCCTGC 3555437 28 100.0 32 ............................ GCGCCCAGTCGCAGAGCTTGCAGCGGATCGCG 3555497 28 100.0 32 ............................ TCAGGCTCAGCGACCGGCAGAGCTGCTTGCTC 3555557 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 25 28 100.0 32 GTTAGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : CGCGTCTAAAACAGCTAATGAGTGACGCATGGCTAACGGGGATGCGAGACCACGTTAGCGTAAGCGAAGTGCTGGCGGCACCCGACCATGCTAAGCAAATTAACGTGTCGAGGCGGCAGTTTAATACGGGCAGCCCCAGCCGTGCCAAACGCTATGCCAAGCGTCACAACATCACGGAAGCGGAAGCCAAACAGCTATACGCCAAAGTGGCAGACAAACGCATTGAGCTGCCCTTTGTGACGATCAATAGCCGCTCTACTCAGCAGCGCTTCAGCTTGTTTATTGAGCACAGCAAGCCTGCAGATAGCGAGGTTGGAGGAACATTCAACCATTATGGGTTAAGCCCCCAAGCGACGGTGCCGTGGTTTTGACCCTTTTTTTCATTGAAGTAATTGGCAACGAATAATCAACCACTTAGCGGTATCACTTTGAAAAGGGTGGTGCCGCTTTTTTCACTTAAAGCTCTTTAACAATCAGCACACTATATTTGATATGCTCTA # Right flank : ATTGAAATATCCAAGAGTGAATGGGCTTTTCTCTTCATTGTGTCGCGCACCGTTGGGTGCGTGGCCGCGCATCAGAAATTCCGCAACTACTCCTTCTCCTCATCCTCATCCTCATCCTCATCCTCTTCCCAGCGTTCGATGGCGCGTTTGTCGTCGGGGAGTCGCACCATATCGCCCACGTTGAGATTTTGGTGTGACTGAAAGCGGTGGCCGCGTTGGTCGAGAATGGCGGCCACGCTGCCAATGCTCACGGCATCTTCTTCGCGGTAGGCTTCTACTTTGACCCGCACAATGCGGCCTTGGTAACGGGCGGAAAGCACGGCACCTGGGTAGGGGGGCGTGTGTTCGGGGTCGTCCTTGAAGAGGGCTGCTACGCTGGCGCTGCCGGGCTCGTCCCATTCAATGTGCTTGTGCATGGTGAGCGTCCTTACTATGGGTGAATAAAAATAAGAAGGCTCGTTAAGTGTAGTGTGCGTTGGCAGAACTCGGCCAATCTAATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTAGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //